| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is hmuS [H]
Identifier: 157370408
GI number: 157370408
Start: 2364909
End: 2365943
Strand: Reverse
Name: hmuS [H]
Synonym: Spro_2168
Alternate gene names: 157370408
Gene position: 2365943-2364909 (Counterclockwise)
Preceding gene: 157370409
Following gene: 157370407
Centisome position: 43.42
GC content: 57.1
Gene sequence:
>1035_bases ATGAGCAATACCCTATATGCACGCTACCAGCAGGCAAAAATTGATAACCCTGGCAAATATGCGCGTGACCTGGCTGAAAT TCTTGGCGTCAGCGAAGCGGAGCTGACCCACGCCCGCGTCGGTCAGGACACCCGTCGTCTGCAGGCCGATGCCCGTACCC TGCTGACCGAACTCGAACAGGTAGGCGTCACCAAATCCATTACCCGTAATAGCTACGCGGTGCATGAGCAAATGGGTCGT TATCGCAACCAGCATCTGAACGGTCATGCCGGGTTGATCCTCAATCCGCGTGAGCTGGATCTGCGTCTGTTCCTCAACCA GTGGGCCAGCGCTTTCGCCATGAGCGAAACCAACAAGCGCGGCGTACGTCACAGCATTCAGTTCTTCGATCATCAGGGCG ACGCACTGCATAAGGTTTACACCACCGATGAAACCGATCTCCCAGCCTGGATGGCGCTGGTTGAACGCCACCTGAATGCG GAAAACCCGACGCTGGAACTGCAACCGGCAGACGCCACGGTCAGTAACGCCTCGCCAGATGCCGACAAAATTGACCAGGA ATGGCGTGCAATGACCGACGTTCACCAGTTCTTCCAGTTGTTGAGCCGCAACAAACTGACCCGCCAGCAAGCCTTCAGCG CCGTCGGTAACGATTTGGCCTATCGGGTCGATAACAGCGCCCTGAGCCAATTGCTTAACGCCGCGATGGGCCTGCAGAAC GAAATCATGATTTTTGTCGGCAACCGTGGCTGCGTGCAGATCTTTACCGGTCAGATTGAACGCCTGATGCCGCAGGAAGG CTGGATTAACGTGTTCAATCGCCGCTTCACCCTGCACCTGATCGAAGATGCGATCGCCGAAAGCTGGATCACCCGCAAGC CCACCAAAGACGGCTTCGTCACCAGTCTGGAACTGTTTGCCGCCGACGGCACGCAGATAGCTCAACTTTACGGCCAGCGT ACCGAAGGCCAGCCGGAGCAAACTCAGTGGCGTGAGCAGGTTGCCGCGCTTGAACCCAAGGACGTTGCCGCATGA
Upstream 100 bases:
>100_bases GCGTAATGCCAAACTGCTGGTCAGCTATCAGTGGTAACGTTTTAAATCCGGCGGGCATGAAGATTGCCCGCCGCTTGATT CACACACAGGAGAACCCGCA
Downstream 100 bases:
>100_bases AACCTTCATTGACCCGTCGTCTGGCGCTGTGCATTGCGCTGGCGTTGCCGTTCACCGCTGCGGCGGCGGAACGTATTGTC TCGATAGGCGGTGACGTCAC
Product: hemin-degrading family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MSNTLYARYQQAKIDNPGKYARDLAEILGVSEAELTHARVGQDTRRLQADARTLLTELEQVGVTKSITRNSYAVHEQMGR YRNQHLNGHAGLILNPRELDLRLFLNQWASAFAMSETNKRGVRHSIQFFDHQGDALHKVYTTDETDLPAWMALVERHLNA ENPTLELQPADATVSNASPDADKIDQEWRAMTDVHQFFQLLSRNKLTRQQAFSAVGNDLAYRVDNSALSQLLNAAMGLQN EIMIFVGNRGCVQIFTGQIERLMPQEGWINVFNRRFTLHLIEDAIAESWITRKPTKDGFVTSLELFAADGTQIAQLYGQR TEGQPEQTQWREQVAALEPKDVAA
Sequences:
>Translated_344_residues MSNTLYARYQQAKIDNPGKYARDLAEILGVSEAELTHARVGQDTRRLQADARTLLTELEQVGVTKSITRNSYAVHEQMGR YRNQHLNGHAGLILNPRELDLRLFLNQWASAFAMSETNKRGVRHSIQFFDHQGDALHKVYTTDETDLPAWMALVERHLNA ENPTLELQPADATVSNASPDADKIDQEWRAMTDVHQFFQLLSRNKLTRQQAFSAVGNDLAYRVDNSALSQLLNAAMGLQN EIMIFVGNRGCVQIFTGQIERLMPQEGWINVFNRRFTLHLIEDAIAESWITRKPTKDGFVTSLELFAADGTQIAQLYGQR TEGQPEQTQWREQVAALEPKDVAA >Mature_343_residues SNTLYARYQQAKIDNPGKYARDLAEILGVSEAELTHARVGQDTRRLQADARTLLTELEQVGVTKSITRNSYAVHEQMGRY RNQHLNGHAGLILNPRELDLRLFLNQWASAFAMSETNKRGVRHSIQFFDHQGDALHKVYTTDETDLPAWMALVERHLNAE NPTLELQPADATVSNASPDADKIDQEWRAMTDVHQFFQLLSRNKLTRQQAFSAVGNDLAYRVDNSALSQLLNAAMGLQNE IMIFVGNRGCVQIFTGQIERLMPQEGWINVFNRRFTLHLIEDAIAESWITRKPTKDGFVTSLELFAADGTQIAQLYGQRT EGQPEQTQWREQVAALEPKDVAA
Specific function: Part of the binding-protein-dependent transport system for hemin [H]
COG id: COG3720
COG function: function code P; Putative heme degradation protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To Y.enterocolitica hemS [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007845 [H]
Pfam domain/function: PF05171 HemS [H]
EC number: NA
Molecular weight: Translated: 38964; Mature: 38833
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNTLYARYQQAKIDNPGKYARDLAEILGVSEAELTHARVGQDTRRLQADARTLLTELEQ CCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHH VGVTKSITRNSYAVHEQMGRYRNQHLNGHAGLILNPRELDLRLFLNQWASAFAMSETNKR HCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHH GVRHSIQFFDHQGDALHKVYTTDETDLPAWMALVERHLNAENPTLELQPADATVSNASPD HHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCC ADKIDQEWRAMTDVHQFFQLLSRNKLTRQQAFSAVGNDLAYRVDNSALSQLLNAAMGLQN HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHEEECHHHHHHHHHHHHCCCC EIMIFVGNRGCVQIFTGQIERLMPQEGWINVFNRRFTLHLIEDAIAESWITRKPTKDGFV CEEEEECCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC TSLELFAADGTQIAQLYGQRTEGQPEQTQWREQVAALEPKDVAA EEHHEEECCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHCCC >Mature Secondary Structure SNTLYARYQQAKIDNPGKYARDLAEILGVSEAELTHARVGQDTRRLQADARTLLTELEQ CCCHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHH VGVTKSITRNSYAVHEQMGRYRNQHLNGHAGLILNPRELDLRLFLNQWASAFAMSETNKR HCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHH GVRHSIQFFDHQGDALHKVYTTDETDLPAWMALVERHLNAENPTLELQPADATVSNASPD HHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCC ADKIDQEWRAMTDVHQFFQLLSRNKLTRQQAFSAVGNDLAYRVDNSALSQLLNAAMGLQN HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHEEECHHHHHHHHHHHHCCCC EIMIFVGNRGCVQIFTGQIERLMPQEGWINVFNRRFTLHLIEDAIAESWITRKPTKDGFV CEEEEECCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC TSLELFAADGTQIAQLYGQRTEGQPEQTQWREQVAALEPKDVAA EEHHEEECCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9026634; 11586360; 12142430 [H]