| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157370377
Identifier: 157370377
GI number: 157370377
Start: 2331597
End: 2333378
Strand: Direct
Name: 157370377
Synonym: Spro_2137
Alternate gene names: NA
Gene position: 2331597-2333378 (Clockwise)
Preceding gene: 157370376
Following gene: 157370378
Centisome position: 42.79
GC content: 57.74
Gene sequence:
>1782_bases ATGGCAACGGTAATGAAAAAAGTAGACGCGGTGATCGTCGGCTTCGGCTGGGTGGGCGCCATTATGGCCAAAGAATTGAC CGAGGCCGGGCTGAACGTGGTGGCGCTGGAACGCGGCCCGATGCGCGATACCTATCCGGATGGTTCCTACCCGCAGGTGA TCGACGAACTGACCTATAACATTCGCCGCAAACTGTTCCAGGATTTGTCAAAAAGCACCGTGACCATTCGTCATAATACC AGCCAGACGGCGGTGCCTTACCGTCAGTTGGCGGCGTTCTTGCCGGGTACCGGCGTGGGTGGCGCAGGCCTGCACTGGTC TGGCGTGCATTTCCGGGTCGATCCGATTGAATTGCGCATGCGCAGTCACTACGAAGAACGTTACGGCAAGAGTTTTATCC CGAAAGACATGACCATTCAGGATTTCGGTGTCAGCTACGCCGAGCTGGAGCCGTTCTTCGACAAAGCGGAAAAAGTGTTC GGCACTTCCGGCACCGCCTGGACCATCAAAGGCCAGAAAGTGGGCCAAAAGGGCGGTAACCCGTTTGCCGGTGACCGTTC CGATGACTTCCCGTTGCCGGCGCAGAAAAATACTTTCTCCGCCCAGATGTTCGAGAAAGCCGCGCGAGACGTGGGATACC ATCCTTATAACCTGCCTTCTGCCAACACCTCGGATTCCTATACCAACCCGTATGGCGCGCAGATGGGGCCGTGCAACTTC TGCGGTTTCTGTAGCGGTTACGCCTGCTATATGTATTCCAAAGCCTCGCCGAACGTCAATATTCTGCCGGCACTGCGCAT GGAGAAACGCTTCGAGCTGCGCACCAACGCCAACGTGTTGAAAGTGAACCTGACCGCCGACAAGTCTCGTGCGACCGGTG TGAATTACATTGATGCGCAGGGCCGTGAAGTTGAGCAACCGGCCGAACTGGTGATCCTGGGCGCGTTCCAGTTCCACAAC GTCCACCTGATGCTGCTGTCCGGCATCGGCAAACCTTACGATCCGGTGACCGGCGAAGGGGTGGTTGGGCGTAACTTCGC CTATCAGAACATGACCACCATCAAGGCGTTCTTCGACAAGGACGTGTTCACTAACCCGTTCATCGGCGCCGGCGGTAACG GTGTGGGTGTGGACGACTTCAACGCCGACAACTTTGACCATGCCGAGGCAGGCTTTGTTGGCGGTTCGCCGTTCTGGGTC AACCAGGCGGGCACCAAACCGATCTCCGGCTTGCCAACCCCTCCGGGTACCCCGGCCTGGGGCAGTAAGTGGAAAGCGGC GGTGGCAGATGCCTATACCCATCATGTCTCGATGGATGCCCACGGCGCGCACCAGTCTTATCGCAGCAACTATCTGGATC TCGATCCTACCTATAAGAACGTGTTCGGCCAGCCGCTGCTGCGCATGACGTTCGACTGGCAGGAAAACGACGTCAAGATG TCGCAATTTATGTACGAGAAAATGGCGCCGATCGCCAAGGCCATGAACCCGAAACTGATCTCCGGCAGCCCAAAAAATGC CGACAGCCATTTCGATACCACCAGCTACCAAACCACCCATATGAACGGCGGTGCGGTGATGGGCGAAGATCCGAACACCA GCGCGGTGAACCGCTATCTGCAGAGCTGGGACGTGCATAACGTGTTCTCGATCGGCGCGTCGGCCTTCCCGCAGGGGCTG GGTTACAACCCGACCGGCACCGTGGCCGCGTTGGCTTACTGGTCTGCACGCGCTATTCGCGAGCAGTATCTGAAAAACCC AGGCCCTTTGGTGCAGGCATAA
Upstream 100 bases:
>100_bases TTAATTTTCCGGGCGCACGCGCCGACTTTATGGACTGGGTTGAGCGAGGGGAACGTTATCCCTTACCCCCGGTATCAATT CGTGGGGAGAGGGGGTAACA
Downstream 100 bases:
>100_bases GGACGGCGACTGATGAAAGCATTTGTTCCCGCACTGGTTCTCAGTGCACTGAGTTTCTCCGTCTGGGCGCAGGACGCCAC GGTCAGCAGCGAGTTGATCA
Product: gluconate 2-dehydrogenase
Products: NA
Alternate protein names: GA 2-DH dehydrogenase subunit; GADH dehydrogenase subunit [H]
Number of amino acids: Translated: 593; Mature: 592
Protein sequence:
>593_residues MATVMKKVDAVIVGFGWVGAIMAKELTEAGLNVVALERGPMRDTYPDGSYPQVIDELTYNIRRKLFQDLSKSTVTIRHNT SQTAVPYRQLAAFLPGTGVGGAGLHWSGVHFRVDPIELRMRSHYEERYGKSFIPKDMTIQDFGVSYAELEPFFDKAEKVF GTSGTAWTIKGQKVGQKGGNPFAGDRSDDFPLPAQKNTFSAQMFEKAARDVGYHPYNLPSANTSDSYTNPYGAQMGPCNF CGFCSGYACYMYSKASPNVNILPALRMEKRFELRTNANVLKVNLTADKSRATGVNYIDAQGREVEQPAELVILGAFQFHN VHLMLLSGIGKPYDPVTGEGVVGRNFAYQNMTTIKAFFDKDVFTNPFIGAGGNGVGVDDFNADNFDHAEAGFVGGSPFWV NQAGTKPISGLPTPPGTPAWGSKWKAAVADAYTHHVSMDAHGAHQSYRSNYLDLDPTYKNVFGQPLLRMTFDWQENDVKM SQFMYEKMAPIAKAMNPKLISGSPKNADSHFDTTSYQTTHMNGGAVMGEDPNTSAVNRYLQSWDVHNVFSIGASAFPQGL GYNPTGTVAALAYWSARAIREQYLKNPGPLVQA
Sequences:
>Translated_593_residues MATVMKKVDAVIVGFGWVGAIMAKELTEAGLNVVALERGPMRDTYPDGSYPQVIDELTYNIRRKLFQDLSKSTVTIRHNT SQTAVPYRQLAAFLPGTGVGGAGLHWSGVHFRVDPIELRMRSHYEERYGKSFIPKDMTIQDFGVSYAELEPFFDKAEKVF GTSGTAWTIKGQKVGQKGGNPFAGDRSDDFPLPAQKNTFSAQMFEKAARDVGYHPYNLPSANTSDSYTNPYGAQMGPCNF CGFCSGYACYMYSKASPNVNILPALRMEKRFELRTNANVLKVNLTADKSRATGVNYIDAQGREVEQPAELVILGAFQFHN VHLMLLSGIGKPYDPVTGEGVVGRNFAYQNMTTIKAFFDKDVFTNPFIGAGGNGVGVDDFNADNFDHAEAGFVGGSPFWV NQAGTKPISGLPTPPGTPAWGSKWKAAVADAYTHHVSMDAHGAHQSYRSNYLDLDPTYKNVFGQPLLRMTFDWQENDVKM SQFMYEKMAPIAKAMNPKLISGSPKNADSHFDTTSYQTTHMNGGAVMGEDPNTSAVNRYLQSWDVHNVFSIGASAFPQGL GYNPTGTVAALAYWSARAIREQYLKNPGPLVQA >Mature_592_residues ATVMKKVDAVIVGFGWVGAIMAKELTEAGLNVVALERGPMRDTYPDGSYPQVIDELTYNIRRKLFQDLSKSTVTIRHNTS QTAVPYRQLAAFLPGTGVGGAGLHWSGVHFRVDPIELRMRSHYEERYGKSFIPKDMTIQDFGVSYAELEPFFDKAEKVFG TSGTAWTIKGQKVGQKGGNPFAGDRSDDFPLPAQKNTFSAQMFEKAARDVGYHPYNLPSANTSDSYTNPYGAQMGPCNFC GFCSGYACYMYSKASPNVNILPALRMEKRFELRTNANVLKVNLTADKSRATGVNYIDAQGREVEQPAELVILGAFQFHNV HLMLLSGIGKPYDPVTGEGVVGRNFAYQNMTTIKAFFDKDVFTNPFIGAGGNGVGVDDFNADNFDHAEAGFVGGSPFWVN QAGTKPISGLPTPPGTPAWGSKWKAAVADAYTHHVSMDAHGAHQSYRSNYLDLDPTYKNVFGQPLLRMTFDWQENDVKMS QFMYEKMAPIAKAMNPKLISGSPKNADSHFDTTSYQTTHMNGGAVMGEDPNTSAVNRYLQSWDVHNVFSIGASAFPQGLG YNPTGTVAALAYWSARAIREQYLKNPGPLVQA
Specific function: Part of the heterotrimer that catalyzes the conversion of D-gluconate to 2-dehydro-D-gluconate. This subunit functions as the dehydrogenase [H]
COG id: COG2303
COG function: function code E; Choline dehydrogenase and related flavoproteins
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein; Periplasmic side (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GMC oxidoreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000172 - InterPro: IPR007867 [H]
Pfam domain/function: PF05199 GMC_oxred_C; PF00732 GMC_oxred_N [H]
EC number: =1.1.99.3 [H]
Molecular weight: Translated: 65068; Mature: 64937
Theoretical pI: Translated: 7.47; Mature: 7.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATVMKKVDAVIVGFGWVGAIMAKELTEAGLNVVALERGPMRDTYPDGSYPQVIDELTYN CCHHHHHHCEEEECHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHH IRRKLFQDLSKSTVTIRHNTSQTAVPYRQLAAFLPGTGVGGAGLHWSGVHFRVDPIELRM HHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCEECCEEEEECHHHHHH RSHYEERYGKSFIPKDMTIQDFGVSYAELEPFFDKAEKVFGTSGTAWTIKGQKVGQKGGN HHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECHHHCCCCCC PFAGDRSDDFPLPAQKNTFSAQMFEKAARDVGYHPYNLPSANTSDSYTNPYGAQMGPCNF CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH CGFCSGYACYMYSKASPNVNILPALRMEKRFELRTNANVLKVNLTADKSRATGVNYIDAQ HHHHCCEEEEEEECCCCCCEEEECHHCCHHHEEECCCEEEEEEEECCCCCCCCCCEECCC GREVEQPAELVILGAFQFHNVHLMLLSGIGKPYDPVTGEGVVGRNFAYQNMTTIKAFFDK CCCCCCCCEEEEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHCC DVFTNPFIGAGGNGVGVDDFNADNFDHAEAGFVGGSPFWVNQAGTKPISGLPTPPGTPAW CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC GSKWKAAVADAYTHHVSMDAHGAHQSYRSNYLDLDPTYKNVFGQPLLRMTFDWQENDVKM CCCHHHHHHHHHHHEEECCCCCCHHHHHCCCCCCCCHHHHHHCCCEEEEEECCCCCCHHH SQFMYEKMAPIAKAMNPKLISGSPKNADSHFDTTSYQTTHMNGGAVMGEDPNTSAVNRYL HHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEECCCCEEECCCCCHHHHHHHH QSWDVHNVFSIGASAFPQGLGYNPTGTVAALAYWSARAIREQYLKNPGPLVQA HHCCCHHHHHHCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure ATVMKKVDAVIVGFGWVGAIMAKELTEAGLNVVALERGPMRDTYPDGSYPQVIDELTYN CHHHHHHCEEEECHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHH IRRKLFQDLSKSTVTIRHNTSQTAVPYRQLAAFLPGTGVGGAGLHWSGVHFRVDPIELRM HHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCEECCEEEEECHHHHHH RSHYEERYGKSFIPKDMTIQDFGVSYAELEPFFDKAEKVFGTSGTAWTIKGQKVGQKGGN HHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECHHHCCCCCC PFAGDRSDDFPLPAQKNTFSAQMFEKAARDVGYHPYNLPSANTSDSYTNPYGAQMGPCNF CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH CGFCSGYACYMYSKASPNVNILPALRMEKRFELRTNANVLKVNLTADKSRATGVNYIDAQ HHHHCCEEEEEEECCCCCCEEEECHHCCHHHEEECCCEEEEEEEECCCCCCCCCCEECCC GREVEQPAELVILGAFQFHNVHLMLLSGIGKPYDPVTGEGVVGRNFAYQNMTTIKAFFDK CCCCCCCCEEEEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHCC DVFTNPFIGAGGNGVGVDDFNADNFDHAEAGFVGGSPFWVNQAGTKPISGLPTPPGTPAW CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC GSKWKAAVADAYTHHVSMDAHGAHQSYRSNYLDLDPTYKNVFGQPLLRMTFDWQENDVKM CCCHHHHHHHHHHHEEECCCCCCHHHHHCCCCCCCCHHHHHHCCCEEEEEECCCCCCHHH SQFMYEKMAPIAKAMNPKLISGSPKNADSHFDTTSYQTTHMNGGAVMGEDPNTSAVNRYL HHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEECCCCEEECCCCCHHHHHHHH QSWDVHNVFSIGASAFPQGLGYNPTGTVAALAYWSARAIREQYLKNPGPLVQA HHCCCHHHHHHCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9352901 [H]