| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is ydiZ [H]
Identifier: 157370374
GI number: 157370374
Start: 2329485
End: 2329784
Strand: Reverse
Name: ydiZ [H]
Synonym: Spro_2134
Alternate gene names: 157370374
Gene position: 2329784-2329485 (Counterclockwise)
Preceding gene: 157370381
Following gene: 157370373
Centisome position: 42.76
GC content: 49.0
Gene sequence:
>300_bases ATGAGTCAATCTGCAACAACGTGTTTTGTGGTGACTTTTCGCTATCAGGAAGAAGGATTAGCTGATTTGGCCAAGCTGAC AGGACAATTAACCCTTCAGGGATTTGTCACGTCGGTGGCAGACGAAAATGGCGTTCCGCACGAACTGGGCAGCAACAGTT TTGCGCTGATAACCCCACTGGATCAACAGGATGTGCAACTACTGGCACAGAAGCTTGGGCAGGTCGCGTTGGGTAAGACT CCGGAGGTCGATATTGTCACCTACGACGATTACGCTAAGCGGTTACATACTGATACATAA
Upstream 100 bases:
>100_bases CACTCCTTTCAATGAGTTGCGTAGCATATACAACTTGTAAGGACGCCTGTACGCTTTTTTTGGTCTAATCTCAAGCTACT CGTATACCAAGAGGTGATTT
Downstream 100 bases:
>100_bases AATGCTATAACTCACCGGGTGGTATTATTTTTTCCATTGAGTAAATAACCGGCAGTCAGCCGGCAGGTGACGCTTGACTT TGCTCTAGTTGATATTGATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 99; Mature: 98
Protein sequence:
>99_residues MSQSATTCFVVTFRYQEEGLADLAKLTGQLTLQGFVTSVADENGVPHELGSNSFALITPLDQQDVQLLAQKLGQVALGKT PEVDIVTYDDYAKRLHTDT
Sequences:
>Translated_99_residues MSQSATTCFVVTFRYQEEGLADLAKLTGQLTLQGFVTSVADENGVPHELGSNSFALITPLDQQDVQLLAQKLGQVALGKT PEVDIVTYDDYAKRLHTDT >Mature_98_residues SQSATTCFVVTFRYQEEGLADLAKLTGQLTLQGFVTSVADENGVPHELGSNSFALITPLDQQDVQLLAQKLGQVALGKTP EVDIVTYDDYAKRLHTDT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788018, Length=83, Percent_Identity=34.9397590361446, Blast_Score=66, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022597 - InterPro: IPR020499 - ProDom: PD066031 [H]
Pfam domain/function: PF11080 DUF2622 [H]
EC number: NA
Molecular weight: Translated: 10774; Mature: 10643
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSATTCFVVTFRYQEEGLADLAKLTGQLTLQGFVTSVADENGVPHELGSNSFALITPL CCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECC DQQDVQLLAQKLGQVALGKTPEVDIVTYDDYAKRLHTDT CHHHHHHHHHHHCHHHCCCCCCEEEEECCHHHHHHCCCC >Mature Secondary Structure SQSATTCFVVTFRYQEEGLADLAKLTGQLTLQGFVTSVADENGVPHELGSNSFALITPL CCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECC DQQDVQLLAQKLGQVALGKTPEVDIVTYDDYAKRLHTDT CHHHHHHHHHHHCHHHCCCCCCEEEEECCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]