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The map label for this gene is yebR [H]

Identifier: 157370357

GI number: 157370357

Start: 2311715

End: 2312212

Strand: Direct

Name: yebR [H]

Synonym: Spro_2117

Alternate gene names: 157370357

Gene position: 2311715-2312212 (Clockwise)

Preceding gene: 157370347

Following gene: 157370358

Centisome position: 42.43

GC content: 54.62

Gene sequence:

>498_bases
ATGACAAAAGAACAATTCTACGCGGAATTAAAACGTGATTTGTGCGCGCTGCTCGACGGGGAAACCAACTTTATCGCCGC
GTTGTCCAACGCCAGTGCGCTGATCAACGAGCGCCTTGACGACGTTAACTGGGTTGGATTTTACCTGATGGACGGCACCC
AACTGGTGCTGGGTCCTTTCCAGGGAAAAATCGCCTGTGTGCGCATTCCGGTAGGCAAGGGAGTATGCGGCAGCGCCGTG
GCGGAAAATCGCGTGCAGCGCGTTGGCGATGTCCATGAGTTCCCTGGTCATATCGCCTGTGACGCGGCCAGTAATGCAGA
AATTGTGCTGCCGCTCAACGTTGGCGGTCAGATTATCGGCGTTCTCGATATCGACAGCACAGTTTATCAACGTTTCGACG
AACAGGACGAAAGGGGCCTGGAAGCAGTGGTGGCGGGGCTTTGCGCGCAGCTGGAACAGTGTGATAGTGCGAAATATGTC
ACTGTAACGGCAAGTTGA

Upstream 100 bases:

>100_bases
CAACAGATGATTAACCTTGTGGCTATACGCATTTAATGCTTATTTTATAGGGCTTAAGACTTGGGCTAGTGGCCTTCTTC
ACTGTATTAATGGTTAACAC

Downstream 100 bases:

>100_bases
TCTACGGTTAACGTGGCATTTACCGATGGCGTCATTATAATGACGCCTGTTCATGCCTGCGCTGGTTGGCAAACCCGTTG
TAATCAGGAAATTTCATGGA

Product: putative GAF sensor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MTKEQFYAELKRDLCALLDGETNFIAALSNASALINERLDDVNWVGFYLMDGTQLVLGPFQGKIACVRIPVGKGVCGSAV
AENRVQRVGDVHEFPGHIACDAASNAEIVLPLNVGGQIIGVLDIDSTVYQRFDEQDERGLEAVVAGLCAQLEQCDSAKYV
TVTAS

Sequences:

>Translated_165_residues
MTKEQFYAELKRDLCALLDGETNFIAALSNASALINERLDDVNWVGFYLMDGTQLVLGPFQGKIACVRIPVGKGVCGSAV
AENRVQRVGDVHEFPGHIACDAASNAEIVLPLNVGGQIIGVLDIDSTVYQRFDEQDERGLEAVVAGLCAQLEQCDSAKYV
TVTAS
>Mature_164_residues
TKEQFYAELKRDLCALLDGETNFIAALSNASALINERLDDVNWVGFYLMDGTQLVLGPFQGKIACVRIPVGKGVCGSAVA
ENRVQRVGDVHEFPGHIACDAASNAEIVLPLNVGGQIIGVLDIDSTVYQRFDEQDERGLEAVVAGLCAQLEQCDSAKYVT
VTAS

Specific function: Unknown

COG id: COG1956

COG function: function code T; GAF domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the free Met sulfoxide reductase family [H]

Homologues:

Organism=Escherichia coli, GI171474009, Length=164, Percent_Identity=64.0243902439024, Blast_Score=218, Evalue=2e-58,
Organism=Saccharomyces cerevisiae, GI6322781, Length=151, Percent_Identity=43.046357615894, Blast_Score=126, Evalue=1e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003018
- InterPro:   IPR000614 [H]

Pfam domain/function: PF01590 GAF [H]

EC number: NA

Molecular weight: Translated: 17736; Mature: 17605

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKEQFYAELKRDLCALLDGETNFIAALSNASALINERLDDVNWVGFYLMDGTQLVLGPF
CCHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCCCEEEEEEECCCEEEEECC
QGKIACVRIPVGKGVCGSAVAENRVQRVGDVHEFPGHIACDAASNAEIVLPLNVGGQIIG
CCCEEEEEEECCCCCCHHHHHHHHHHHHCCHHHCCCCEEECCCCCCEEEEEECCCCEEEE
VLDIDSTVYQRFDEQDERGLEAVVAGLCAQLEQCDSAKYVTVTAS
EEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
>Mature Secondary Structure 
TKEQFYAELKRDLCALLDGETNFIAALSNASALINERLDDVNWVGFYLMDGTQLVLGPF
CHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCCCEEEEEEECCCEEEEECC
QGKIACVRIPVGKGVCGSAVAENRVQRVGDVHEFPGHIACDAASNAEIVLPLNVGGQIIG
CCCEEEEEEECCCCCCHHHHHHHHHHHHCCHHHCCCCEEECCCCCCEEEEEECCCCEEEE
VLDIDSTVYQRFDEQDERGLEAVVAGLCAQLEQCDSAKYVTVTAS
EEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 10493123 [H]