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The map label for this gene is tsx [H]

Identifier: 157370314

GI number: 157370314

Start: 2265092

End: 2265973

Strand: Direct

Name: tsx [H]

Synonym: Spro_2072

Alternate gene names: 157370314

Gene position: 2265092-2265973 (Clockwise)

Preceding gene: 157370313

Following gene: 157370315

Centisome position: 41.57

GC content: 52.27

Gene sequence:

>882_bases
ATGAAAAAAATAGCTCTCGCAGCAGGTATCCTGCTCGCAGCGTCTTACAGTGCATCATCAATGGCTGATAGCAAAGACAG
CCAATACGTCTCGGATTGGTGGCACCAGAGCGTTAACGTGGTGGGCAGCTACCACACCCGTTTCGGACCTCAGTTGAACA
ACGACGTCTACCTGGAGTACGAAGCCTTCGCTAAAAAAGATTGGTTTGATTTCTATGGCTACGTCGATGTGCCTAAATTC
TTCGGCGTTGGCAACACCCCGGACCGTGGTATCTGGGACAAGGGCTCACCGATGTTTATGGAGATCGAACCTCGTTTCTC
TATCGACAAACTGACCGGTACCGATCTGAGCTTTGGTCCATTCAAAGAATGGTACTTCGCCAACAACTACATCTATGACC
TGGGCCACGACACCGACGGCCGTCAGAACACCTGGTACATGGGTCTGGGCACCGATATCGAGACCGGCCTGCCGATGAGC
CTGTCGATGAACATCTATGCCAAATACCAGTGGGAAAACTATCAGGCTGCCAACGAAAACAGCTGGGATGGTTACCGTTT
CAAGGTGAAATACTTTGTGCCGTTGACCCAGGTGTGGGGCGGCAATCTGAGCTACATCGGCTTTACCAACTTTGACTTTG
GTTCCGATCTGGGCAAAGACAGCAACTGGACCGACGGCACTGGCAAACAGGTTCGCACCAGCAACTCGATCGCTTCCAGC
CATATTCTGGCGCTGAACTACGATCACTGGCACTACTCCTTCGTGGCTCGTTATTTCCATAACGGTGGCCAATGGCAGGA
TGGGGCAGATATTGGTACCCCACAGGGCCCAATCAAATCCACCGGCTGGGGCTACTACCTGGTCGCCGGTTATAACTTCT
GA

Upstream 100 bases:

>100_bases
CCCAAGAAGTTTGTAAGCGGAGGCAACGCCAGGTGTCGTCAGACTCATTGTCATCTTTTCTAACGGGCAGGAAATGGCCC
TTTAAGCATGTGGTAATAAA

Downstream 100 bases:

>100_bases
TTTTCCGTGGTATCAGAAACAGAAAACCCCGCTTTGGCGGGGTTTTTTTTCGTCATCACTGCACTTGTTCAGCGGGTAAA
TGTCGCACCGGCATAAATAA

Product: nucleoside-specific channel-forming protein Tsx

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MKKIALAAGILLAASYSASSMADSKDSQYVSDWWHQSVNVVGSYHTRFGPQLNNDVYLEYEAFAKKDWFDFYGYVDVPKF
FGVGNTPDRGIWDKGSPMFMEIEPRFSIDKLTGTDLSFGPFKEWYFANNYIYDLGHDTDGRQNTWYMGLGTDIETGLPMS
LSMNIYAKYQWENYQAANENSWDGYRFKVKYFVPLTQVWGGNLSYIGFTNFDFGSDLGKDSNWTDGTGKQVRTSNSIASS
HILALNYDHWHYSFVARYFHNGGQWQDGADIGTPQGPIKSTGWGYYLVAGYNF

Sequences:

>Translated_293_residues
MKKIALAAGILLAASYSASSMADSKDSQYVSDWWHQSVNVVGSYHTRFGPQLNNDVYLEYEAFAKKDWFDFYGYVDVPKF
FGVGNTPDRGIWDKGSPMFMEIEPRFSIDKLTGTDLSFGPFKEWYFANNYIYDLGHDTDGRQNTWYMGLGTDIETGLPMS
LSMNIYAKYQWENYQAANENSWDGYRFKVKYFVPLTQVWGGNLSYIGFTNFDFGSDLGKDSNWTDGTGKQVRTSNSIASS
HILALNYDHWHYSFVARYFHNGGQWQDGADIGTPQGPIKSTGWGYYLVAGYNF
>Mature_293_residues
MKKIALAAGILLAASYSASSMADSKDSQYVSDWWHQSVNVVGSYHTRFGPQLNNDVYLEYEAFAKKDWFDFYGYVDVPKF
FGVGNTPDRGIWDKGSPMFMEIEPRFSIDKLTGTDLSFGPFKEWYFANNYIYDLGHDTDGRQNTWYMGLGTDIETGLPMS
LSMNIYAKYQWENYQAANENSWDGYRFKVKYFVPLTQVWGGNLSYIGFTNFDFGSDLGKDSNWTDGTGKQVRTSNSIASS
HILALNYDHWHYSFVARYFHNGGQWQDGADIGTPQGPIKSTGWGYYLVAGYNF

Specific function: Constitutes the receptor for colicin K and phage T6, and functions as substrate-specific channel for nucleosides and deoxynucleosides [H]

COG id: COG3248

COG function: function code M; Nucleoside-binding outer membrane protein

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786612, Length=296, Percent_Identity=74.3243243243243, Blast_Score=426, Evalue=1e-121,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003055
- InterPro:   IPR018013 [H]

Pfam domain/function: PF03502 Channel_Tsx [H]

EC number: NA

Molecular weight: Translated: 33434; Mature: 33434

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIALAAGILLAASYSASSMADSKDSQYVSDWWHQSVNVVGSYHTRFGPQLNNDVYLEY
CCCHHHHHHEEEEECCCCCCCCCCCCCHHHHHHHHHHHEEEEEEHHHCCCCCCCCEEEEE
EAFAKKDWFDFYGYVDVPKFFGVGNTPDRGIWDKGSPMFMEIEPRFSIDKLTGTDLSFGP
HHHCCCCCHHHCCEEECHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCC
FKEWYFANNYIYDLGHDTDGRQNTWYMGLGTDIETGLPMSLSMNIYAKYQWENYQAANEN
CCCEEEECCEEEECCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEEEECCEECCCCC
SWDGYRFKVKYFVPLTQVWGGNLSYIGFTNFDFGSDLGKDSNWTDGTGKQVRTSNSIASS
CCCCEEEEEEEEEEEHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC
HILALNYDHWHYSFVARYFHNGGQWQDGADIGTPQGPIKSTGWGYYLVAGYNF
EEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
>Mature Secondary Structure
MKKIALAAGILLAASYSASSMADSKDSQYVSDWWHQSVNVVGSYHTRFGPQLNNDVYLEY
CCCHHHHHHEEEEECCCCCCCCCCCCCHHHHHHHHHHHEEEEEEHHHCCCCCCCCEEEEE
EAFAKKDWFDFYGYVDVPKFFGVGNTPDRGIWDKGSPMFMEIEPRFSIDKLTGTDLSFGP
HHHCCCCCHHHCCEEECHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCC
FKEWYFANNYIYDLGHDTDGRQNTWYMGLGTDIETGLPMSLSMNIYAKYQWENYQAANEN
CCCEEEECCEEEECCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEEEECCEECCCCC
SWDGYRFKVKYFVPLTQVWGGNLSYIGFTNFDFGSDLGKDSNWTDGTGKQVRTSNSIASS
CCCCEEEEEEEEEEEHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC
HILALNYDHWHYSFVARYFHNGGQWQDGADIGTPQGPIKSTGWGYYLVAGYNF
EEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9043137 [H]