| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yddG [H]
Identifier: 157370312
GI number: 157370312
Start: 2263457
End: 2264350
Strand: Direct
Name: yddG [H]
Synonym: Spro_2070
Alternate gene names: 157370312
Gene position: 2263457-2264350 (Clockwise)
Preceding gene: 157370311
Following gene: 157370313
Centisome position: 41.54
GC content: 57.05
Gene sequence:
>894_bases ATGTCTTCACTCCCCGTTTCGTATAAAGCCACTTTGCTCGGTCTGCTGGCGATCCTGCTGTGGAGCAGCGTGGTTGGCCT GATCCGCAGCGTCAGCGAAGGGTTGGGGCCCATTGGCGGTGCCGCGATGATTTACAGCGTCAGCGCAGTTTTCCTGCTGT TGGCGCTACGGCTACCCAATCTTCGCCATTTCCCACGCGCCTACCTGATCCTCGGCAGCCTGCTGTTTGTCAGCTATGAG ATCTGTCTGTCGCTGTCGCTGGGCTATGCCAACACCCGCCTGCAGGCCATCGAGGTCGGGATGATCAACTACCTTTGGCC CTGTTTCACCGTACTGATGGCGCTGGTGTTTAACGGACAAAAGGCCAAGTGGTGGCTACTGCCCGGATTACTGCTGTCAT TGTTCGGTATCGGTTGGATCATGAGCGGTGAGGGCGGCTGGTCGCCGGCGCAAATGCTGGCTAACGTACGCAGTAATCCA TTGAGTTATTCGCTGGCCTTCGGCGGCGCGATAATTTGGGCGTTATATTGCAACCTGACCAAGAGAATTGCCCAGGGCCA TAACGGCGTGGTGCTGTTTATTACCCTGACCGCCGTTGCGCTGTGGGTGAAATACGCCTTTAGCCACGAAAGCGGCATGC AGTTCACCCTGCCGGTGACCCTGACGTTACTCTGTGCCGGCATGGCGATGGGGGCGGGGTACGCGGCGTGGAATGTGGGT ATTTTGCACGGCAATATGACGCTGTTGGCGACGGTATCCTATTTTACCCCGGTGCTGTCGGCGGTATTTGCCGCACTGGT ATTGAATACCGCACTGACCGCCAGTTTCTGGCAGGGCGTGGTAATGGTGACTCTGGGATCGTTAATTTGTTGGCGGGCAA CCCGAGGAAACTAA
Upstream 100 bases:
>100_bases CAGCAATAACTGAGTCAGGCGGGGTTTCCCGCCTTTCTTTTTTGTCCGTCGGACAGTAGAGTGAAAATACTGATAAAAAA TAACCGATTGGATCACCTCC
Downstream 100 bases:
>100_bases CGGAAATGCTCCGCCGGTTGCCCAATGTTGAACTAGAATCTAACTAGCAGACAAACATGAAGGAACATAAAAATGAGAGA CGATATCCAATTCATTCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MSSLPVSYKATLLGLLAILLWSSVVGLIRSVSEGLGPIGGAAMIYSVSAVFLLLALRLPNLRHFPRAYLILGSLLFVSYE ICLSLSLGYANTRLQAIEVGMINYLWPCFTVLMALVFNGQKAKWWLLPGLLLSLFGIGWIMSGEGGWSPAQMLANVRSNP LSYSLAFGGAIIWALYCNLTKRIAQGHNGVVLFITLTAVALWVKYAFSHESGMQFTLPVTLTLLCAGMAMGAGYAAWNVG ILHGNMTLLATVSYFTPVLSAVFAALVLNTALTASFWQGVVMVTLGSLICWRATRGN
Sequences:
>Translated_297_residues MSSLPVSYKATLLGLLAILLWSSVVGLIRSVSEGLGPIGGAAMIYSVSAVFLLLALRLPNLRHFPRAYLILGSLLFVSYE ICLSLSLGYANTRLQAIEVGMINYLWPCFTVLMALVFNGQKAKWWLLPGLLLSLFGIGWIMSGEGGWSPAQMLANVRSNP LSYSLAFGGAIIWALYCNLTKRIAQGHNGVVLFITLTAVALWVKYAFSHESGMQFTLPVTLTLLCAGMAMGAGYAAWNVG ILHGNMTLLATVSYFTPVLSAVFAALVLNTALTASFWQGVVMVTLGSLICWRATRGN >Mature_296_residues SSLPVSYKATLLGLLAILLWSSVVGLIRSVSEGLGPIGGAAMIYSVSAVFLLLALRLPNLRHFPRAYLILGSLLFVSYEI CLSLSLGYANTRLQAIEVGMINYLWPCFTVLMALVFNGQKAKWWLLPGLLLSLFGIGWIMSGEGGWSPAQMLANVRSNPL SYSLAFGGAIIWALYCNLTKRIAQGHNGVVLFITLTAVALWVKYAFSHESGMQFTLPVTLTLLCAGMAMGAGYAAWNVGI LHGNMTLLATVSYFTPVLSAVFAALVLNTALTASFWQGVVMVTLGSLICWRATRGN
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DUF6 domain [H]
Homologues:
Organism=Escherichia coli, GI145693132, Length=287, Percent_Identity=56.4459930313589, Blast_Score=333, Evalue=1e-92,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 31995; Mature: 31863
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLPVSYKATLLGLLAILLWSSVVGLIRSVSEGLGPIGGAAMIYSVSAVFLLLALRLPN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC LRHFPRAYLILGSLLFVSYEICLSLSLGYANTRLQAIEVGMINYLWPCFTVLMALVFNGQ CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC KAKWWLLPGLLLSLFGIGWIMSGEGGWSPAQMLANVRSNPLSYSLAFGGAIIWALYCNLT CCEEEEHHHHHHHHHHHCEEECCCCCCCHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHH KRIAQGHNGVVLFITLTAVALWVKYAFSHESGMQFTLPVTLTLLCAGMAMGAGYAAWNVG HHHHCCCCCEEEEHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCCHHHEEEE ILHGNMTLLATVSYFTPVLSAVFAALVLNTALTASFWQGVVMVTLGSLICWRATRGN EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SSLPVSYKATLLGLLAILLWSSVVGLIRSVSEGLGPIGGAAMIYSVSAVFLLLALRLPN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC LRHFPRAYLILGSLLFVSYEICLSLSLGYANTRLQAIEVGMINYLWPCFTVLMALVFNGQ CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC KAKWWLLPGLLLSLFGIGWIMSGEGGWSPAQMLANVRSNPLSYSLAFGGAIIWALYCNLT CCEEEEHHHHHHHHHHHCEEECCCCCCCHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHH KRIAQGHNGVVLFITLTAVALWVKYAFSHESGMQFTLPVTLTLLCAGMAMGAGYAAWNVG HHHHCCCCCEEEEHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCCHHHEEEE ILHGNMTLLATVSYFTPVLSAVFAALVLNTALTASFWQGVVMVTLGSLICWRATRGN EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503; 1834669; 7567469 [H]