| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is puuP [H]
Identifier: 157370311
GI number: 157370311
Start: 2261995
End: 2263365
Strand: Direct
Name: puuP [H]
Synonym: Spro_2069
Alternate gene names: 157370311
Gene position: 2261995-2263365 (Clockwise)
Preceding gene: 157370310
Following gene: 157370312
Centisome position: 41.51
GC content: 54.63
Gene sequence:
>1371_bases ATGACGACTAATGTGACTGACATCAATGAGGCAGCCAAGCCGCAACTGCGTAAAAGCCTGAAGCTGTGGCAAGTGGTGAT GATGGGCCTGGCCTATCTGACACCAATGACGGTATTCGACACTTTCGGCATCGTCTCCGGCCTTACCGACGGTCACGTAC CGGCCTCCTATTTACTGGCGCTGGCCGGCGTGCTGTTTACCGCCATCAGCTACGGCAAGCTGGTGCGCCAGTTCCCGACC GCCGGTTCAGCCTACACCTATGCGCAAAAAGCCATAAATCCGCACGTCGGTTTTTTGGTGGGTTGGTCTTCACTGCTCGA TTATCTGTTCCTGCCGATGATCAATACCCTGTTGGCGAAGATTTACCTGACGGCGTTGTTCCCGGAAGTGCCGCCGTGGA TATGGGTGGTGGGCTTTGTGATTATCATTACCGCCATCAACCTGAAAAGCGTCAATCTGGTGGCCAACTTCAATACCCTG TTCGTACTGGCCCAGGTGGCAATCATTGTGGTGTTTATCTTCCTGGTGGTACGTGGCCTGCACAACGGTGAAGGACTGGG GACGGTATGGAGCCTGCAACCCTTCGTCAGCGAAAATGCGCATTTACTGCCGATCATCACCGGCGCCACCATCTTGTGTT TCTCTTTCCTCGGCTTTGATGCGGTGACCACGCTATGTGAAGAAACGCCCGATGCCGCCAGGGTGATCCCGCGCGCTATC TTTCTGACCGCGCTGTATGGTGGGGTGATCTTCATCAGCGTGTCATTCTTTATCCAACTGTTTTTCCCTTCGATTCAGCG GTTCCATCAGCCGGATGCGGCACTGCCGGAAATAGCGCTGTACGTGGGCGGCAAGCTGTTCCAGTCGATTTTCCTGTGCG TCACCTTTATCAACACCCTGGCCTCGGGCCTGGCATCACATGCCAGCGTTTCACGGCTGTTGTATGTGATGGGGCGCGAT AACGTGTTCCCGGAAAAATATTTTGGCTATATCCACCCGAAATGGCGCACGCCATCACTCAACGTGTTGCTGGTGGGGCT GGTCGCACTGTCTGCGTTGTCTTTCGATCTGGTCACGGCGACCGCATTGATCAACTTCGGTGCGCTGGTGGCTTTTACCT TCGTTAATCTGTCGGTGATCAGTCATTTCTATATTCGCGAGGGGCGTAACAAGAGCTGGAAGGATCGCTTCAACTATCTG TTCCTGCCATTGGTCGGGGCTTTAACTGTCGGCGTGTTGTGGTTAAACCTGGAAAAAAGCTCGCTGACCATGGGACTGAT CTGGGCGGTTATGGGCTTTGGTTACCTGGCGTATCTCACCCGGCGTTTCCGCCAGCCGCCACCGCAGCTGGAACGACAAC CGCAGCAATAA
Upstream 100 bases:
>100_bases TCTTTAAACCGCACTTCCCGCCGCCTGAGCAGCAGTTTCCCCGCGGCCTCTCTGAATGACGTTAAACGGTTACCAGCAGA GGACAACGAGGGGAAGAGCC
Downstream 100 bases:
>100_bases CTGAGTCAGGCGGGGTTTCCCGCCTTTCTTTTTTGTCCGTCGGACAGTAGAGTGAAAATACTGATAAAAAATAACCGATT GGATCACCTCCATGTCTTCA
Product: amino acid permease-associated protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 456; Mature: 455
Protein sequence:
>456_residues MTTNVTDINEAAKPQLRKSLKLWQVVMMGLAYLTPMTVFDTFGIVSGLTDGHVPASYLLALAGVLFTAISYGKLVRQFPT AGSAYTYAQKAINPHVGFLVGWSSLLDYLFLPMINTLLAKIYLTALFPEVPPWIWVVGFVIIITAINLKSVNLVANFNTL FVLAQVAIIVVFIFLVVRGLHNGEGLGTVWSLQPFVSENAHLLPIITGATILCFSFLGFDAVTTLCEETPDAARVIPRAI FLTALYGGVIFISVSFFIQLFFPSIQRFHQPDAALPEIALYVGGKLFQSIFLCVTFINTLASGLASHASVSRLLYVMGRD NVFPEKYFGYIHPKWRTPSLNVLLVGLVALSALSFDLVTATALINFGALVAFTFVNLSVISHFYIREGRNKSWKDRFNYL FLPLVGALTVGVLWLNLEKSSLTMGLIWAVMGFGYLAYLTRRFRQPPPQLERQPQQ
Sequences:
>Translated_456_residues MTTNVTDINEAAKPQLRKSLKLWQVVMMGLAYLTPMTVFDTFGIVSGLTDGHVPASYLLALAGVLFTAISYGKLVRQFPT AGSAYTYAQKAINPHVGFLVGWSSLLDYLFLPMINTLLAKIYLTALFPEVPPWIWVVGFVIIITAINLKSVNLVANFNTL FVLAQVAIIVVFIFLVVRGLHNGEGLGTVWSLQPFVSENAHLLPIITGATILCFSFLGFDAVTTLCEETPDAARVIPRAI FLTALYGGVIFISVSFFIQLFFPSIQRFHQPDAALPEIALYVGGKLFQSIFLCVTFINTLASGLASHASVSRLLYVMGRD NVFPEKYFGYIHPKWRTPSLNVLLVGLVALSALSFDLVTATALINFGALVAFTFVNLSVISHFYIREGRNKSWKDRFNYL FLPLVGALTVGVLWLNLEKSSLTMGLIWAVMGFGYLAYLTRRFRQPPPQLERQPQQ >Mature_455_residues TTNVTDINEAAKPQLRKSLKLWQVVMMGLAYLTPMTVFDTFGIVSGLTDGHVPASYLLALAGVLFTAISYGKLVRQFPTA GSAYTYAQKAINPHVGFLVGWSSLLDYLFLPMINTLLAKIYLTALFPEVPPWIWVVGFVIIITAINLKSVNLVANFNTLF VLAQVAIIVVFIFLVVRGLHNGEGLGTVWSLQPFVSENAHLLPIITGATILCFSFLGFDAVTTLCEETPDAARVIPRAIF LTALYGGVIFISVSFFIQLFFPSIQRFHQPDAALPEIALYVGGKLFQSIFLCVTFINTLASGLASHASVSRLLYVMGRDN VFPEKYFGYIHPKWRTPSLNVLLVGLVALSALSFDLVTATALINFGALVAFTFVNLSVISHFYIREGRNKSWKDRFNYLF LPLVGALTVGVLWLNLEKSSLTMGLIWAVMGFGYLAYLTRRFRQPPPQLERQPQQ
Specific function: Imports putrescine [H]
COG id: COG0531
COG function: function code E; Amino acid transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]
Homologues:
Organism=Homo sapiens, GI4507047, Length=420, Percent_Identity=22.6190476190476, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI114326544, Length=192, Percent_Identity=27.0833333333333, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI114326550, Length=192, Percent_Identity=27.0833333333333, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI181337167, Length=375, Percent_Identity=24, Blast_Score=68, Evalue=1e-11, Organism=Escherichia coli, GI87081869, Length=445, Percent_Identity=83.1460674157303, Blast_Score=759, Evalue=0.0, Organism=Escherichia coli, GI87082023, Length=451, Percent_Identity=64.7450110864745, Blast_Score=588, Evalue=1e-169, Organism=Escherichia coli, GI1788480, Length=401, Percent_Identity=23.9401496259352, Blast_Score=90, Evalue=4e-19, Organism=Escherichia coli, GI1786789, Length=175, Percent_Identity=31.4285714285714, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI1786602, Length=270, Percent_Identity=25.5555555555556, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI87082250, Length=363, Percent_Identity=23.6914600550964, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI87081708, Length=463, Percent_Identity=22.6781857451404, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1786302, Length=173, Percent_Identity=26.0115606936416, Blast_Score=62, Evalue=5e-11, Organism=Escherichia coli, GI1789017, Length=349, Percent_Identity=24.0687679083095, Blast_Score=62, Evalue=9e-11, Organism=Caenorhabditis elegans, GI17532491, Length=441, Percent_Identity=24.7165532879819, Blast_Score=94, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17533459, Length=435, Percent_Identity=24.367816091954, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI24668806, Length=424, Percent_Identity=25.2358490566038, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI21356285, Length=424, Percent_Identity=25.2358490566038, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI24668802, Length=424, Percent_Identity=25.2358490566038, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI24667468, Length=408, Percent_Identity=26.2254901960784, Blast_Score=89, Evalue=8e-18, Organism=Drosophila melanogaster, GI221512776, Length=423, Percent_Identity=22.4586288416076, Blast_Score=86, Evalue=4e-17, Organism=Drosophila melanogaster, GI24666159, Length=423, Percent_Identity=22.4586288416076, Blast_Score=86, Evalue=5e-17, Organism=Drosophila melanogaster, GI281366235, Length=413, Percent_Identity=24.455205811138, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI116007820, Length=413, Percent_Identity=24.455205811138, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI116007818, Length=413, Percent_Identity=24.455205811138, Blast_Score=80, Evalue=4e-15, Organism=Drosophila melanogaster, GI85725152, Length=413, Percent_Identity=24.455205811138, Blast_Score=80, Evalue=4e-15, Organism=Drosophila melanogaster, GI161077963, Length=398, Percent_Identity=23.1155778894472, Blast_Score=69, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004841 - InterPro: IPR002293 [H]
Pfam domain/function: PF00324 AA_permease [H]
EC number: NA
Molecular weight: Translated: 50513; Mature: 50382
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTNVTDINEAAKPQLRKSLKLWQVVMMGLAYLTPMTVFDTFGIVSGLTDGHVPASYLLA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH LAGVLFTAISYGKLVRQFPTAGSAYTYAQKAINPHVGFLVGWSSLLDYLFLPMINTLLAK HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IYLTALFPEVPPWIWVVGFVIIITAINLKSVNLVANFNTLFVLAQVAIIVVFIFLVVRGL HHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHCC HNGEGLGTVWSLQPFVSENAHLLPIITGATILCFSFLGFDAVTTLCEETPDAARVIPRAI CCCCCCCEEEECCHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH FLTALYGGVIFISVSFFIQLFFPSIQRFHQPDAALPEIALYVGGKLFQSIFLCVTFINTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ASGLASHASVSRLLYVMGRDNVFPEKYFGYIHPKWRTPSLNVLLVGLVALSALSFDLVTA HHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH TALINFGALVAFTFVNLSVISHFYIREGRNKSWKDRFNYLFLPLVGALTVGVLWLNLEKS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECHH SLTMGLIWAVMGFGYLAYLTRRFRQPPPQLERQPQQ HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCC >Mature Secondary Structure TTNVTDINEAAKPQLRKSLKLWQVVMMGLAYLTPMTVFDTFGIVSGLTDGHVPASYLLA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH LAGVLFTAISYGKLVRQFPTAGSAYTYAQKAINPHVGFLVGWSSLLDYLFLPMINTLLAK HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IYLTALFPEVPPWIWVVGFVIIITAINLKSVNLVANFNTLFVLAQVAIIVVFIFLVVRGL HHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHCC HNGEGLGTVWSLQPFVSENAHLLPIITGATILCFSFLGFDAVTTLCEETPDAARVIPRAI CCCCCCCEEEECCHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH FLTALYGGVIFISVSFFIQLFFPSIQRFHQPDAALPEIALYVGGKLFQSIFLCVTFINTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ASGLASHASVSRLLYVMGRDNVFPEKYFGYIHPKWRTPSLNVLLVGLVALSALSFDLVTA HHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH TALINFGALVAFTFVNLSVISHFYIREGRNKSWKDRFNYLFLPLVGALTVGVLWLNLEKS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECHH SLTMGLIWAVMGFGYLAYLTRRFRQPPPQLERQPQQ HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]