| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157370301
Identifier: 157370301
GI number: 157370301
Start: 2251832
End: 2252476
Strand: Direct
Name: 157370301
Synonym: Spro_2059
Alternate gene names: NA
Gene position: 2251832-2252476 (Clockwise)
Preceding gene: 157370300
Following gene: 157370303
Centisome position: 41.33
GC content: 51.94
Gene sequence:
>645_bases ATGACGCTGAAGTTGGATGGTGAAAAGATTGCTCGTAACCGGTTTACCGGCGAAAAAATTGAAAACGGCAGCTTTATCAA CTGCGATTTTTCGGGCACCGACCTGACGGGGACCGAATTTATCGACTGTCAGTTTTATGACCGCGAGAGCCAACAGGGCG GTAATTTCAGCCGTGCCTTATTGAAGGATGCCAGCTTCAAAAACTGTGACCTGTCGATGGCGGACTTCAGAAATGCCAGC GCGTTAGGTATCGAAATCCGTGAGTGCCGGGCACAGGGCGCAGACTTTCGCGGCACCAGCTTTATGAATATGATCACCCC ACGCACCTGGTTTTGCAGCGCATACATCACCAAAAGCAACCTGAGCTACGCCAATTTTTCGAAAGTGGTACTGGAGAAGT GCGAGCTGTGGGAAAACCGCTGGAACAGTGCACAGATCCTGGGGGCGACTTTTAGCGGTTCGGATCTTTCCGGTGGCGAG TTTGCGTCGTTTGATTGGCGTGCCGCCAACTTTACCCATTGTGATTTGACCAACTCGGAATTGGGTGAGTTGGATCTGCG CAGCACCGATCTGCAGGGCGTGAAGCTGGACAGTTATCAGGTGTTTCAGATGATGGAGCGGCTGGGCATTGCGGTTATTG GCTAA
Upstream 100 bases:
>100_bases TTGTGCTGTGCAGCGGAAAAACCGGGCAAAACGTTTTTCACTGGCCAGCAGATCTGCTTATAATGCCTCACTGACTGTAT AAATAAACAGGTGTGGTGCG
Downstream 100 bases:
>100_bases GCGTGACTGGCGTTCCTGCTTTTGTCGCGCCTTTACAAGCCAGCGGAGGGTAAGGATTTAATCACTTTATCGGCATCTAT CGGCATTTTCCGTACCGTCA
Product: pentapeptide repeat-containing protein
Products: NA
Alternate protein names: Pentapeptide Repeat Protein; Pentapeptide Repeat Family Protein; Low-Complexity Protein; Quinolone Resistance Determinant; Quinolone Resistance Gene; Quinolone Resistance Determinant QnrC; QnrB6 Protein; Fluoroquinolone Resistance Protein; Quinolone Resistance Determinant QnrA
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MTLKLDGEKIARNRFTGEKIENGSFINCDFSGTDLTGTEFIDCQFYDRESQQGGNFSRALLKDASFKNCDLSMADFRNAS ALGIEIRECRAQGADFRGTSFMNMITPRTWFCSAYITKSNLSYANFSKVVLEKCELWENRWNSAQILGATFSGSDLSGGE FASFDWRAANFTHCDLTNSELGELDLRSTDLQGVKLDSYQVFQMMERLGIAVIG
Sequences:
>Translated_214_residues MTLKLDGEKIARNRFTGEKIENGSFINCDFSGTDLTGTEFIDCQFYDRESQQGGNFSRALLKDASFKNCDLSMADFRNAS ALGIEIRECRAQGADFRGTSFMNMITPRTWFCSAYITKSNLSYANFSKVVLEKCELWENRWNSAQILGATFSGSDLSGGE FASFDWRAANFTHCDLTNSELGELDLRSTDLQGVKLDSYQVFQMMERLGIAVIG >Mature_213_residues TLKLDGEKIARNRFTGEKIENGSFINCDFSGTDLTGTEFIDCQFYDRESQQGGNFSRALLKDASFKNCDLSMADFRNASA LGIEIRECRAQGADFRGTSFMNMITPRTWFCSAYITKSNLSYANFSKVVLEKCELWENRWNSAQILGATFSGSDLSGGEF ASFDWRAANFTHCDLTNSELGELDLRSTDLQGVKLDSYQVFQMMERLGIAVIG
Specific function: Unknown
COG id: COG1357
COG function: function code S; Uncharacterized low-complexity proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23998; Mature: 23867
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLKLDGEKIARNRFTGEKIENGSFINCDFSGTDLTGTEFIDCQFYDRESQQGGNFSRAL CEEEECCHHHHHHCCCCCEECCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCCHHHHH LKDASFKNCDLSMADFRNASALGIEIRECRAQGADFRGTSFMNMITPRTWFCSAYITKSN HHCCCCCCCCCCHHHCCCCCEEEEEHHHHHHCCCCCCCCCHHHHCCCCEEEEEEEEEECC LSYANFSKVVLEKCELWENRWNSAQILGATFSGSDLSGGEFASFDWRAANFTHCDLTNSE CCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEECCCCCCCCEEEECCCCCC LGELDLRSTDLQGVKLDSYQVFQMMERLGIAVIG CCCEECCCCCCCCEEECHHHHHHHHHHCCEEECC >Mature Secondary Structure TLKLDGEKIARNRFTGEKIENGSFINCDFSGTDLTGTEFIDCQFYDRESQQGGNFSRAL EEEECCHHHHHHCCCCCEECCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCCHHHHH LKDASFKNCDLSMADFRNASALGIEIRECRAQGADFRGTSFMNMITPRTWFCSAYITKSN HHCCCCCCCCCCHHHCCCCCEEEEEHHHHHHCCCCCCCCCHHHHCCCCEEEEEEEEEECC LSYANFSKVVLEKCELWENRWNSAQILGATFSGSDLSGGEFASFDWRAANFTHCDLTNSE CCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEECCCCCCCCEEEECCCCCC LGELDLRSTDLQGVKLDSYQVFQMMERLGIAVIG CCCEECCCCCCCCEEECHHHHHHHHHHCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA