| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157370287
Identifier: 157370287
GI number: 157370287
Start: 2239457
End: 2240578
Strand: Direct
Name: 157370287
Synonym: Spro_2045
Alternate gene names: NA
Gene position: 2239457-2240578 (Clockwise)
Preceding gene: 157370286
Following gene: 157370289
Centisome position: 41.1
GC content: 58.29
Gene sequence:
>1122_bases ATGCAACAAAAACAGCCGGCCGAATTCCGGCCAGAATTCCGCATTATTGCGGAGGGGCGGGATATAACCGCGATCATTCG TGAAAACCTGGTGGATCTCAGCTTAACGGACAACGGCGGCGCCACGGGCAAAACTGATGAACTGCAAATTACCCTCCTGT CGGAAACGCTAAAACTCCCGTCCAAAGGCGCCCGCCTGAGCGTTGCCCTGGGCTTTAATGGCCAACTGGTCGATAAGGGC TGGTTTGTGGTGTCTGGCCGCGCCAGTAGCGGGCCACCGCGCAAGATCCAGCTTTACGCCACATCGGCCCCAATGAACGC GCAAAAACAGCCAGGTGATGTGCAGAGCCAGAAAAGCCGCAGCTGGGACGGCGTGACGCTGGGGGACATTGTGAAAACGG TGGCAACCGATAACGGCCTCATCCCCAAAATAGCCACGCAGCTGGCCGGCATCGCGATAGAACACATTGACCAGGTGAGA GAGTCCGACGCGGCGCTGATGACCCGCCTGGCGCGTGCGCATAACGCGGTAAGCAAGGCCGCCGGTGGTTATTGGTTGTT CCTGGAGCAGGGGGAGGCGACCACCGCCAGCGGTGGCGCCCTCAGTAACGTAACGATAACCCGGGAGGCGCTATCCTCGT GGAGCTATTCAGATGGCCAGCGCGGGGCCACAACGGGAAAGCCGGCGAAGACGGCAGACGGTAAGGGCAAAAAGGGCAAA GTGAGCGTTGCCTATTTCGACCCCGCTGATGGTAGAACTAAAACGCAATCGCTGGAGCATGATGGGCCTGACCAGTCCAA CCCCTTCACGCAGCCGAGCAAAGCCCAGGCGGACAGCAGCGCCAAATCAAAAATGACGCAGGCCAACCGGAACGAAAGGC GAATGACGCTAAGCGGCCCGGGCCGGCCGCAGTATGTGCCGTTGACGGCCGAAAGCCGGATAACAACGGCGGGATTTGGT GAGGAAGAGGATCGCACCTGGTTAATCGAGTCCCTGGCGTTCTCTTTGAGCAGCTCAGGCCTGGCGATGGCGTTTAACCT GGCAACAGATATTAAACCACCTACCGGCAGTAAAGGCGCGAAGAGGAAAAAGAAATCCGATGGTATTGGCTATTTCGATT AA
Upstream 100 bases:
>100_bases GGCGGCGCTGGGGGCTGTTTATCCGGCAGGGTTAATCATTACCTTGCCGGACATAGAGACGCCAACGCCTGAATCACCGA TCCAGCTATGGGATTAACCG
Downstream 100 bases:
>100_bases CGCTATTCAGATCGCGAATGTCAGAGGATGGTTGCCATAAAACGCTTGTTTTATGGCAACTGACATTAAAAATAAATAAC GAAACAGTTAACTTGGTAAT
Product: late control D family protein
Products: NA
Alternate protein names: Phage Late Control D Family Protein; Phage Late Control D; Phage Late Control Gene D Protein; Tail Protein D; Phage-Related Tail Protein; Phage Protein D; Late Control Gene D Protein; Regulator Of Late Gene Expression; Fels-2 Prophage Protein; Phage Protein D-Like; Pyocin R2_PP Tail Formation; Prophage Tail Protein; Phage Protein; Phage-Related Late Control Gene Protein; Pyocin R2_PP Tail Formation GPD; Phage Late Control Gene D Protein GpD; Phage Late Control; Regulator Of Late Phage Gene Expression; Gene Late Control D Protein; Bacteriophage P2 GpD Protein; Bacteriophage Late Gene Regulator; Phage Late Control Gene D Protein-Like Protein; Phage Late Control Gene D Protein GPD; Late Control Gene D Protein Prophage; Bacteriophage Late Gene Control Protein D; Bacteriophage Late Control D Protein; Bacteriophage Tail Protein D; Bacteriophage-Related Tail D Protein; Phage-Like Tail Protein; Gene D Protein; Late Gene Regulator; Phage Tail Protein; Prophage; Bacteriophage P2 Tail Protein GPD; Phage-Like Protein; Phage Late Control D Protein; Phage Regulator; Phage Tail Protein D
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MQQKQPAEFRPEFRIIAEGRDITAIIRENLVDLSLTDNGGATGKTDELQITLLSETLKLPSKGARLSVALGFNGQLVDKG WFVVSGRASSGPPRKIQLYATSAPMNAQKQPGDVQSQKSRSWDGVTLGDIVKTVATDNGLIPKIATQLAGIAIEHIDQVR ESDAALMTRLARAHNAVSKAAGGYWLFLEQGEATTASGGALSNVTITREALSSWSYSDGQRGATTGKPAKTADGKGKKGK VSVAYFDPADGRTKTQSLEHDGPDQSNPFTQPSKAQADSSAKSKMTQANRNERRMTLSGPGRPQYVPLTAESRITTAGFG EEEDRTWLIESLAFSLSSSGLAMAFNLATDIKPPTGSKGAKRKKKSDGIGYFD
Sequences:
>Translated_373_residues MQQKQPAEFRPEFRIIAEGRDITAIIRENLVDLSLTDNGGATGKTDELQITLLSETLKLPSKGARLSVALGFNGQLVDKG WFVVSGRASSGPPRKIQLYATSAPMNAQKQPGDVQSQKSRSWDGVTLGDIVKTVATDNGLIPKIATQLAGIAIEHIDQVR ESDAALMTRLARAHNAVSKAAGGYWLFLEQGEATTASGGALSNVTITREALSSWSYSDGQRGATTGKPAKTADGKGKKGK VSVAYFDPADGRTKTQSLEHDGPDQSNPFTQPSKAQADSSAKSKMTQANRNERRMTLSGPGRPQYVPLTAESRITTAGFG EEEDRTWLIESLAFSLSSSGLAMAFNLATDIKPPTGSKGAKRKKKSDGIGYFD >Mature_373_residues MQQKQPAEFRPEFRIIAEGRDITAIIRENLVDLSLTDNGGATGKTDELQITLLSETLKLPSKGARLSVALGFNGQLVDKG WFVVSGRASSGPPRKIQLYATSAPMNAQKQPGDVQSQKSRSWDGVTLGDIVKTVATDNGLIPKIATQLAGIAIEHIDQVR ESDAALMTRLARAHNAVSKAAGGYWLFLEQGEATTASGGALSNVTITREALSSWSYSDGQRGATTGKPAKTADGKGKKGK VSVAYFDPADGRTKTQSLEHDGPDQSNPFTQPSKAQADSSAKSKMTQANRNERRMTLSGPGRPQYVPLTAESRITTAGFG EEEDRTWLIESLAFSLSSSGLAMAFNLATDIKPPTGSKGAKRKKKSDGIGYFD
Specific function: Unknown
COG id: COG3500
COG function: function code R; Phage protein D
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39820; Mature: 39820
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQKQPAEFRPEFRIIAEGRDITAIIRENLVDLSLTDNGGATGKTDELQITLLSETLKLP CCCCCCCCCCCCEEEEECCCCEEEEECCCCEEEEEECCCCCCCCCCCEEEEEEEHHHCCC SKGARLSVALGFNGQLVDKGWFVVSGRASSGPPRKIQLYATSAPMNAQKQPGDVQSQKSR CCCCEEEEEECCCCEEEECCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHCC SWDGVTLGDIVKTVATDNGLIPKIATQLAGIAIEHIDQVRESDAALMTRLARAHNAVSKA CCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AGGYWLFLEQGEATTASGGALSNVTITREALSSWSYSDGQRGATTGKPAKTADGKGKKGK CCCEEEEEECCCCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCE VSVAYFDPADGRTKTQSLEHDGPDQSNPFTQPSKAQADSSAKSKMTQANRNERRMTLSGP EEEEEECCCCCCCHHCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCCCCEEEECCC GRPQYVPLTAESRITTAGFGEEEDRTWLIESLAFSLSSSGLAMAFNLATDIKPPTGSKGA CCCCEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCC KRKKKSDGIGYFD CHHHHCCCCCCCC >Mature Secondary Structure MQQKQPAEFRPEFRIIAEGRDITAIIRENLVDLSLTDNGGATGKTDELQITLLSETLKLP CCCCCCCCCCCCEEEEECCCCEEEEECCCCEEEEEECCCCCCCCCCCEEEEEEEHHHCCC SKGARLSVALGFNGQLVDKGWFVVSGRASSGPPRKIQLYATSAPMNAQKQPGDVQSQKSR CCCCEEEEEECCCCEEEECCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHCC SWDGVTLGDIVKTVATDNGLIPKIATQLAGIAIEHIDQVRESDAALMTRLARAHNAVSKA CCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AGGYWLFLEQGEATTASGGALSNVTITREALSSWSYSDGQRGATTGKPAKTADGKGKKGK CCCEEEEEECCCCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCE VSVAYFDPADGRTKTQSLEHDGPDQSNPFTQPSKAQADSSAKSKMTQANRNERRMTLSGP EEEEEECCCCCCCHHCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCCCCEEEECCC GRPQYVPLTAESRITTAGFGEEEDRTWLIESLAFSLSSSGLAMAFNLATDIKPPTGSKGA CCCCEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCC KRKKKSDGIGYFD CHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA