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The map label for this gene is tfaD [H]

Identifier: 157370284

GI number: 157370284

Start: 2236048

End: 2237973

Strand: Direct

Name: tfaD [H]

Synonym: Spro_2042

Alternate gene names: 157370284

Gene position: 2236048-2237973 (Clockwise)

Preceding gene: 157370283

Following gene: 157370285

Centisome position: 41.04

GC content: 53.32

Gene sequence:

>1926_bases
ATGAGTATATCGAACAAACGGATTGATCGGCTGCGTTATTGGGTTGCCGCCGGTCTGCGTTCGCTATTCCGCCCCGTTCC
TATGACGGCGGTCGAATGGGCTAACGAATTTTATTACCTCCCCAAAGAATCCTCCTATCAAGAGGGGCGCTGGGAAACGA
TGCCGTTTCAGGTTGCGATCATGAACGCAATGGGGAGCGATGACATCCGGGAGGTAAACCTGATTAAGTCGGCGCGCGTC
GGCTATTCAAAAATGTTGCTGGCCGTCGTGGCGTATTTTATCCAGCACAAACAGCGAAACGGGCTGTTGTGGCAGCCGAC
GGATGGCGACGCTGAAAATTTTATGAAGTCGCACGTCGAACCGACGATCCGCGACGTTCCCAGTCTCTTGGCAATGGCGC
CCTGGTACGGAAAAAAACACCGCGATAACACGCTTTCGATGAAGCGTTTTTCGAACGGTCGGGGTTTCTGGTGCCTGGGA
GGTAAAGCGGCAAAAAACTACCGTGAAAAATCGGTCGATTATGTTGGCTATGACGAACTGGCCGCCTTTGATGAGGATGT
GGAGAAAGAGGGTTCACCGACGTTCCTGGGTGATAAGCGCATAGAAGGCTCAGTGTGGCCAAAGTCGATACGCGGATCTA
CACCGAAAATCAGGGGCATATGCCAGATAGAACGCGCCGCCAGTGAATCCGGGCATTTGATGCGTTTTCATGTGAAATGC
CCACATTGCGACGAGGAGCAGTTTTTAAAGTTCGGCGATCGTGAAACGCCATACGGTTTTAAGTGGGAATCAGGGAAGCC
GAAGACGGTTTTTTATCTCTGTGAGCATAACGCCTGCGTGATACGCCAGCAGGAACTTAATTTTAGTGGTGCGCGTTATA
TCTGTGAAAACACGGGCCTTTACACGTCTGATGGCCTCCGCTGGTTCGAATCGACGGGGCAGGAGGTTGATCCCCCTGAA
TCAGTATCCTTTCACATCTGGACCGCTTACAGCTCGTTTACTACCTGGGCGCAAATCGTTAAGGACTTTAGAAAGACGAA
GGGCGACCCGGGCAAGCTGAAAACGTTCACCAACACGACGCTAGGCGAAACTTGGGCCGAGGAAGTGGGGGAGCGGCCGT
TACCTGAAACCCTGGTTGAACTGGCAGAACATTACCGGGCAGAGGTGCCCGATCGTGTGGTTTACCTCACTGCCGGCATT
GACTCCCAGCTCGACCGTTACGAAATGCGTGTTTGGGGCTGGGCGCCAGGTGAAGAGGCATTCCTGATCGACCGCGTGAT
TATCATGGGGCGGCACGATGAAGAGGAAACGTTGCTGCGTGTTGATGAGGCCATCAACAAACAGTATCAGCTGGCCGACG
GCACGATCATGACCATTGGCCGTGTTTGTTGGGACACCGGCGGTATCGACCAGACGATAGTTTATAACCGCTCGAAAAAA
CTGGGCCTCTTTCGGGTAATCCCGATCAAGGGCGCCAGCGTTTATGGGAAGCCAGTGGCCAACATGCCGCGCAAGAAAAA
CAGCCACGGCGTTTTTCTGACAGAAATCGGCACTGACGTCGCCAAAGAAGTCATTTACAGCCGCTACAAACTGGAACGCT
CCGCTGATGGCTCCCCCGTTCCTGGGCTTATCCACTACCCGAATAATCCGGCGGTTTTCGACCTGACCGAAGCCGAGCAG
ATGACGGCAGAGGAACTCATAGAAAAATATGAGAAAGGGAAAATTAAATTGCTCTGGGACGCCAAAAAACGCCGAAACGA
GGCCCTCGACTGTTTTGTTTATGCCCTGGCGGCTTTGCGTATCAGCGTTTCGCGCTGGCAGCTGGATTTGGATGTGTTAC
TGGCCAGCCGCCAACAATCACCGTCCGGCCAGCAGGCCAGAAATAATAATGACTTGGCCGCCCTGGCGGCTCAATTGGGA
GGATAA

Upstream 100 bases:

>100_bases
CCTGAACTGGAAAATCGGCATATCGAATTTTTAAAGCGGGATGTGGTGAAAGCCATGAATAAAGCGGCTGCGCTGGATGA
AATTCTTCCGGGGTTGCTGA

Downstream 100 bases:

>100_bases
AGCCGCTGCCGTACTCAGTACGGAGAAGGGTGTGAAGTTAACGACCGAAGGCGGGGCGAAATTGCTCACAGAGCAGACGT
TTTCGGTGGATCCCGACGTG

Product: terminase GpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 641; Mature: 640

Protein sequence:

>641_residues
MSISNKRIDRLRYWVAAGLRSLFRPVPMTAVEWANEFYYLPKESSYQEGRWETMPFQVAIMNAMGSDDIREVNLIKSARV
GYSKMLLAVVAYFIQHKQRNGLLWQPTDGDAENFMKSHVEPTIRDVPSLLAMAPWYGKKHRDNTLSMKRFSNGRGFWCLG
GKAAKNYREKSVDYVGYDELAAFDEDVEKEGSPTFLGDKRIEGSVWPKSIRGSTPKIRGICQIERAASESGHLMRFHVKC
PHCDEEQFLKFGDRETPYGFKWESGKPKTVFYLCEHNACVIRQQELNFSGARYICENTGLYTSDGLRWFESTGQEVDPPE
SVSFHIWTAYSSFTTWAQIVKDFRKTKGDPGKLKTFTNTTLGETWAEEVGERPLPETLVELAEHYRAEVPDRVVYLTAGI
DSQLDRYEMRVWGWAPGEEAFLIDRVIIMGRHDEEETLLRVDEAINKQYQLADGTIMTIGRVCWDTGGIDQTIVYNRSKK
LGLFRVIPIKGASVYGKPVANMPRKKNSHGVFLTEIGTDVAKEVIYSRYKLERSADGSPVPGLIHYPNNPAVFDLTEAEQ
MTAEELIEKYEKGKIKLLWDAKKRRNEALDCFVYALAALRISVSRWQLDLDVLLASRQQSPSGQQARNNNDLAALAAQLG
G

Sequences:

>Translated_641_residues
MSISNKRIDRLRYWVAAGLRSLFRPVPMTAVEWANEFYYLPKESSYQEGRWETMPFQVAIMNAMGSDDIREVNLIKSARV
GYSKMLLAVVAYFIQHKQRNGLLWQPTDGDAENFMKSHVEPTIRDVPSLLAMAPWYGKKHRDNTLSMKRFSNGRGFWCLG
GKAAKNYREKSVDYVGYDELAAFDEDVEKEGSPTFLGDKRIEGSVWPKSIRGSTPKIRGICQIERAASESGHLMRFHVKC
PHCDEEQFLKFGDRETPYGFKWESGKPKTVFYLCEHNACVIRQQELNFSGARYICENTGLYTSDGLRWFESTGQEVDPPE
SVSFHIWTAYSSFTTWAQIVKDFRKTKGDPGKLKTFTNTTLGETWAEEVGERPLPETLVELAEHYRAEVPDRVVYLTAGI
DSQLDRYEMRVWGWAPGEEAFLIDRVIIMGRHDEEETLLRVDEAINKQYQLADGTIMTIGRVCWDTGGIDQTIVYNRSKK
LGLFRVIPIKGASVYGKPVANMPRKKNSHGVFLTEIGTDVAKEVIYSRYKLERSADGSPVPGLIHYPNNPAVFDLTEAEQ
MTAEELIEKYEKGKIKLLWDAKKRRNEALDCFVYALAALRISVSRWQLDLDVLLASRQQSPSGQQARNNNDLAALAAQLG
G
>Mature_640_residues
SISNKRIDRLRYWVAAGLRSLFRPVPMTAVEWANEFYYLPKESSYQEGRWETMPFQVAIMNAMGSDDIREVNLIKSARVG
YSKMLLAVVAYFIQHKQRNGLLWQPTDGDAENFMKSHVEPTIRDVPSLLAMAPWYGKKHRDNTLSMKRFSNGRGFWCLGG
KAAKNYREKSVDYVGYDELAAFDEDVEKEGSPTFLGDKRIEGSVWPKSIRGSTPKIRGICQIERAASESGHLMRFHVKCP
HCDEEQFLKFGDRETPYGFKWESGKPKTVFYLCEHNACVIRQQELNFSGARYICENTGLYTSDGLRWFESTGQEVDPPES
VSFHIWTAYSSFTTWAQIVKDFRKTKGDPGKLKTFTNTTLGETWAEEVGERPLPETLVELAEHYRAEVPDRVVYLTAGID
SQLDRYEMRVWGWAPGEEAFLIDRVIIMGRHDEEETLLRVDEAINKQYQLADGTIMTIGRVCWDTGGIDQTIVYNRSKKL
GLFRVIPIKGASVYGKPVANMPRKKNSHGVFLTEIGTDVAKEVIYSRYKLERSADGSPVPGLIHYPNNPAVFDLTEAEQM
TAEELIEKYEKGKIKLLWDAKKRRNEALDCFVYALAALRISVSRWQLDLDVLLASRQQSPSGQQARNNNDLAALAAQLGG

Specific function: Unknown

COG id: COG5525

COG function: function code R; Bacteriophage tail assembly protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To phage lambda terminase large subunit in the N- terminal section [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003458
- InterPro:   IPR008866 [H]

Pfam domain/function: PF02413 Caudo_TAP; PF05876 Terminase_GpA [H]

EC number: NA

Molecular weight: Translated: 73000; Mature: 72868

Theoretical pI: Translated: 7.31; Mature: 7.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISNKRIDRLRYWVAAGLRSLFRPVPMTAVEWANEFYYLPKESSYQEGRWETMPFQVAI
CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCHHEEECCCCCCCCCCCCCCCCEEEEE
MNAMGSDDIREVNLIKSARVGYSKMLLAVVAYFIQHKQRNGLLWQPTDGDAENFMKSHVE
EECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHCC
PTIRDVPSLLAMAPWYGKKHRDNTLSMKRFSNGRGFWCLGGKAAKNYREKSVDYVGYDEL
HHHHHHHHHHHHCCCCCCCCCCCCEEHHHCCCCCEEEEECCHHHHHHHHHCCCCCCHHHH
AAFDEDVEKEGSPTFLGDKRIEGSVWPKSIRGSTPKIRGICQIERAASESGHLMRFHVKC
HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCCEEEEEEEC
PHCDEEQFLKFGDRETPYGFKWESGKPKTVFYLCEHNACVIRQQELNFSGARYICENTGL
CCCCHHHHHHCCCCCCCCCEEECCCCCCEEEEEEECCEEEEEEECCCCCCCEEEECCCCE
YTSDGLRWFESTGQEVDPPESVSFHIWTAYSSFTTWAQIVKDFRKTKGDPGKLKTFTNTT
ECCCCHHHHHHCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCCEEEECCCC
LGETWAEEVGERPLPETLVELAEHYRAEVPDRVVYLTAGIDSQLDRYEMRVWGWAPGEEA
CHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHEEEEEEECCCCCCC
FLIDRVIIMGRHDEEETLLRVDEAINKQYQLADGTIMTIGRVCWDTGGIDQTIVYNRSKK
EEEEEEEEECCCCCHHHHHHHHHHHCCEEEECCCHHEEHHHHHHCCCCCCCEEEECCCCC
LGLFRVIPIKGASVYGKPVANMPRKKNSHGVFLTEIGTDVAKEVIYSRYKLERSADGSPV
CCEEEEEEECCCCCCCCCHHCCCCCCCCCCEEEEHHCHHHHHHHHHHHHHHHCCCCCCCC
PGLIHYPNNPAVFDLTEAEQMTAEELIEKYEKGKIKLLWDAKKRRNEALDCFVYALAALR
CCEEECCCCCCEEEECCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHH
ISVSRWQLDLDVLLASRQQSPSGQQARNNNDLAALAAQLGG
HHHHHHEEHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
SISNKRIDRLRYWVAAGLRSLFRPVPMTAVEWANEFYYLPKESSYQEGRWETMPFQVAI
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCHHEEECCCCCCCCCCCCCCCCEEEEE
MNAMGSDDIREVNLIKSARVGYSKMLLAVVAYFIQHKQRNGLLWQPTDGDAENFMKSHVE
EECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHCC
PTIRDVPSLLAMAPWYGKKHRDNTLSMKRFSNGRGFWCLGGKAAKNYREKSVDYVGYDEL
HHHHHHHHHHHHCCCCCCCCCCCCEEHHHCCCCCEEEEECCHHHHHHHHHCCCCCCHHHH
AAFDEDVEKEGSPTFLGDKRIEGSVWPKSIRGSTPKIRGICQIERAASESGHLMRFHVKC
HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCCEEEEEEEC
PHCDEEQFLKFGDRETPYGFKWESGKPKTVFYLCEHNACVIRQQELNFSGARYICENTGL
CCCCHHHHHHCCCCCCCCCEEECCCCCCEEEEEEECCEEEEEEECCCCCCCEEEECCCCE
YTSDGLRWFESTGQEVDPPESVSFHIWTAYSSFTTWAQIVKDFRKTKGDPGKLKTFTNTT
ECCCCHHHHHHCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCCEEEECCCC
LGETWAEEVGERPLPETLVELAEHYRAEVPDRVVYLTAGIDSQLDRYEMRVWGWAPGEEA
CHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHEEEEEEECCCCCCC
FLIDRVIIMGRHDEEETLLRVDEAINKQYQLADGTIMTIGRVCWDTGGIDQTIVYNRSKK
EEEEEEEEECCCCCHHHHHHHHHHHCCEEEECCCHHEEHHHHHHCCCCCCCEEEECCCCC
LGLFRVIPIKGASVYGKPVANMPRKKNSHGVFLTEIGTDVAKEVIYSRYKLERSADGSPV
CCEEEEEEECCCCCCCCCHHCCCCCCCCCCEEEEHHCHHHHHHHHHHHHHHHCCCCCCCC
PGLIHYPNNPAVFDLTEAEQMTAEELIEKYEKGKIKLLWDAKKRRNEALDCFVYALAALR
CCEEECCCCCCEEEECCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHH
ISVSRWQLDLDVLLASRQQSPSGQQARNNNDLAALAAQLGG
HHHHHHEEHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]