Definition Serratia proteamaculans 568 chromosome, complete genome.
Accession NC_009832
Length 5,448,853

Click here to switch to the map view.

The map label for this gene is 157370256

Identifier: 157370256

GI number: 157370256

Start: 2207066

End: 2208346

Strand: Reverse

Name: 157370256

Synonym: Spro_2014

Alternate gene names: NA

Gene position: 2208346-2207066 (Counterclockwise)

Preceding gene: 157370257

Following gene: 157370255

Centisome position: 40.53

GC content: 60.81

Gene sequence:

>1281_bases
ATGAAAGGACTTACCCCCTCGCTGCTGGCGCTGTTGATGCTGGGTGCCACCACGGTGCAGGCGAACGACGATCCGCAACT
GGCGGCCCGGCTGCAACACGGGGAATACCTGGCGCGCGCCGGTGACTGCGCCGCCTGCCATACCGCCCCCGGCGGCCAGC
CCTTTTCCGGCGGTCTGAAAATGACCACCCCGGTCGGCGCTATCTATTCCACCAACATCACGCCGGACAAGCAAACCGGC
ATTGGCGAATACAGCCTGCAGGAATTCAGTGACGCGTTACGCAAAGGCGTTGCTCGCGACGGCACCCGGCTCTACCCCGC
GATGCCCTATCCTTCGTTCGCCAAAATCAGTGATGGAGACATACGCGACCTCTACCTGTATTTCACCCGACAGGTTAAAC
CCGTGGTTCAGCAAAATAAGGACAGCAGTATCCCCTGGCCGCTGAGTATCCGCTGGCCGCTGGCCCTGTGGAATCTGGCC
TTTCGGGAGGACGGTACCTATCGGCCGGACGTGACAAAAAGCCTCGACTGGAATCGCGGCGCCTATCTGGTTCAGGGGCT
GGGCCACTGCGGCTCCTGCCACACGCCGCGCGGTATCGGCTTTCAGGAAAAAGCGCTCAGCCAGAGCGACGACGCCTATC
TGAGTGGTGGCACGCTGGAAGGCTGGCATGCTGCCAACCTGCGGGCGGACGCCGTGAGCGGCCTCGGCCGCTGGAGCGCG
GAAGATATTACCCGTTTCCTGAAGACCGGCCATAATCGGCGATTTGCCGCTTTCGGCTCAATGATTGACGTGGTACAAGA
TAGCACTCAGCACCTGAGCGACGCCGATTTACGCGCCATCGCCGGTTATCTGCAATCATTGCCGACCGTCAATAAGGAAA
AGCCGCTGGAGCTGGATGGAGGCACGGGCAAAATGCTGCTAAACGGTAACGTCAGTCAGCCGGGTGCCCAGACCTATCTG
GATAACTGCGCCGCCTGCCACCGCAGCGACGGTCAGGGATATCGCGATACCTTCCCGCAGTTGGCGCTCAACCCGGCGCT
GTTAAGCGACGATCCGTCCTCGCTAATCAGCATTATCCTCAAGGGTTCCCGCACGCCGGTGACCGTCGGCGCGCCAACCG
GGCTGACCATGCCGGACTTTGGCTGGCGCCTTGACGATGAACAAATTGCTCAGCTCGCGACCTTTATTCGCCACAGTTGG
GGCAATGATGCATCGGCGGTGACCGCCGCTCAGGTGCAGGATATCCGCAAAAACAGCGTCACCAAACCAGAGCATCCTTA
A

Upstream 100 bases:

>100_bases
CGTTGGCGCATTGGCCTACTACTCGGCAGAGGCGATCCGCACTCAGTATTTGAAAAATCCCGGTCCCCTGGTTCAGGCCT
GATAGCATAAGGAGCTTCAC

Downstream 100 bases:

>100_bases
AATCTGCCAGGGGCCCAGCCGATTGGGCTCCTGTCTTTTTCTCACAGCCCTTCTCGTTTAAGTTTGGTTTAACTTCTCAT
GGGCATTGTTTATCCAACGT

Product: gluconate 2-dehydrogenase

Products: NA

Alternate protein names: GA 2-DH cytochrome c subunit; GADH cytochrome c subunit [H]

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MKGLTPSLLALLMLGATTVQANDDPQLAARLQHGEYLARAGDCAACHTAPGGQPFSGGLKMTTPVGAIYSTNITPDKQTG
IGEYSLQEFSDALRKGVARDGTRLYPAMPYPSFAKISDGDIRDLYLYFTRQVKPVVQQNKDSSIPWPLSIRWPLALWNLA
FREDGTYRPDVTKSLDWNRGAYLVQGLGHCGSCHTPRGIGFQEKALSQSDDAYLSGGTLEGWHAANLRADAVSGLGRWSA
EDITRFLKTGHNRRFAAFGSMIDVVQDSTQHLSDADLRAIAGYLQSLPTVNKEKPLELDGGTGKMLLNGNVSQPGAQTYL
DNCAACHRSDGQGYRDTFPQLALNPALLSDDPSSLISIILKGSRTPVTVGAPTGLTMPDFGWRLDDEQIAQLATFIRHSW
GNDASAVTAAQVQDIRKNSVTKPEHP

Sequences:

>Translated_426_residues
MKGLTPSLLALLMLGATTVQANDDPQLAARLQHGEYLARAGDCAACHTAPGGQPFSGGLKMTTPVGAIYSTNITPDKQTG
IGEYSLQEFSDALRKGVARDGTRLYPAMPYPSFAKISDGDIRDLYLYFTRQVKPVVQQNKDSSIPWPLSIRWPLALWNLA
FREDGTYRPDVTKSLDWNRGAYLVQGLGHCGSCHTPRGIGFQEKALSQSDDAYLSGGTLEGWHAANLRADAVSGLGRWSA
EDITRFLKTGHNRRFAAFGSMIDVVQDSTQHLSDADLRAIAGYLQSLPTVNKEKPLELDGGTGKMLLNGNVSQPGAQTYL
DNCAACHRSDGQGYRDTFPQLALNPALLSDDPSSLISIILKGSRTPVTVGAPTGLTMPDFGWRLDDEQIAQLATFIRHSW
GNDASAVTAAQVQDIRKNSVTKPEHP
>Mature_426_residues
MKGLTPSLLALLMLGATTVQANDDPQLAARLQHGEYLARAGDCAACHTAPGGQPFSGGLKMTTPVGAIYSTNITPDKQTG
IGEYSLQEFSDALRKGVARDGTRLYPAMPYPSFAKISDGDIRDLYLYFTRQVKPVVQQNKDSSIPWPLSIRWPLALWNLA
FREDGTYRPDVTKSLDWNRGAYLVQGLGHCGSCHTPRGIGFQEKALSQSDDAYLSGGTLEGWHAANLRADAVSGLGRWSA
EDITRFLKTGHNRRFAAFGSMIDVVQDSTQHLSDADLRAIAGYLQSLPTVNKEKPLELDGGTGKMLLNGNVSQPGAQTYL
DNCAACHRSDGQGYRDTFPQLALNPALLSDDPSSLISIILKGSRTPVTVGAPTGLTMPDFGWRLDDEQIAQLATFIRHSW
GNDASAVTAAQVQDIRKNSVTKPEHP

Specific function: Part of the heterotrimer that catalyzes the conversion of D-gluconate to 2-dehydro-D-gluconate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 cytochrome c domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR008168
- InterPro:   IPR014353 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: =1.1.99.3 [H]

Molecular weight: Translated: 46145; Mature: 46145

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGLTPSLLALLMLGATTVQANDDPQLAARLQHGEYLARAGDCAACHTAPGGQPFSGGLK
CCCCCHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCEE
MTTPVGAIYSTNITPDKQTGIGEYSLQEFSDALRKGVARDGTRLYPAMPYPSFAKISDGD
EECCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCC
IRDLYLYFTRQVKPVVQQNKDSSIPWPLSIRWPLALWNLAFREDGTYRPDVTKSLDWNRG
HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHHHHHCCCCCCCCCCCCCCCCCCC
AYLVQGLGHCGSCHTPRGIGFQEKALSQSDDAYLSGGTLEGWHAANLRADAVSGLGRWSA
HHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCEEECCCCCCCCCCCCCHHHHHHCCCCCH
EDITRFLKTGHNRRFAAFGSMIDVVQDSTQHLSDADLRAIAGYLQSLPTVNKEKPLELDG
HHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEECC
GTGKMLLNGNVSQPGAQTYLDNCAACHRSDGQGYRDTFPQLALNPALLSDDPSSLISIIL
CCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHCHHHHCCCHHCCCCHHHHHHHHH
KGSRTPVTVGAPTGLTMPDFGWRLDDEQIAQLATFIRHSWGNDASAVTAAQVQDIRKNSV
CCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
TKPEHP
CCCCCC
>Mature Secondary Structure
MKGLTPSLLALLMLGATTVQANDDPQLAARLQHGEYLARAGDCAACHTAPGGQPFSGGLK
CCCCCHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCEE
MTTPVGAIYSTNITPDKQTGIGEYSLQEFSDALRKGVARDGTRLYPAMPYPSFAKISDGD
EECCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCC
IRDLYLYFTRQVKPVVQQNKDSSIPWPLSIRWPLALWNLAFREDGTYRPDVTKSLDWNRG
HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHHHHHCCCCCCCCCCCCCCCCCCC
AYLVQGLGHCGSCHTPRGIGFQEKALSQSDDAYLSGGTLEGWHAANLRADAVSGLGRWSA
HHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCEEECCCCCCCCCCCCCHHHHHHCCCCCH
EDITRFLKTGHNRRFAAFGSMIDVVQDSTQHLSDADLRAIAGYLQSLPTVNKEKPLELDG
HHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEECC
GTGKMLLNGNVSQPGAQTYLDNCAACHRSDGQGYRDTFPQLALNPALLSDDPSSLISIIL
CCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHCHHHHCCCHHCCCCHHHHHHHHH
KGSRTPVTVGAPTGLTMPDFGWRLDDEQIAQLATFIRHSWGNDASAVTAAQVQDIRKNSV
CCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
TKPEHP
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9352901 [H]