| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157370238
Identifier: 157370238
GI number: 157370238
Start: 2184516
End: 2185001
Strand: Reverse
Name: 157370238
Synonym: Spro_1996
Alternate gene names: NA
Gene position: 2185001-2184516 (Counterclockwise)
Preceding gene: 157370240
Following gene: 157370237
Centisome position: 40.1
GC content: 55.76
Gene sequence:
>486_bases ATGAATATCGATGATGATTTGCAAGCGCTGACCAAACAGGAAGCGACGTTGACCTTCAGTCACTTTGACCATAATACCGC CTGGGAACTGGGATCGGCATTGAGATCCGCTGCAGAACGCGCCCGCCTGTCCATCGCCATCGAAATCCAGCTTGCGGGGC AAACGCTGTTTTATTATGCCATGCCCGGCACCACGCCTGATATTGCGGACTGGGTACGACGTAAACGCAACGTGGTGAAT CACTTCCACAAAAGTTCTTACGCTATCGGCCTGCGCCTGCAGCAACGCCAATCGACGCTGGAAGAACGCTATGGACTCAG CGTACGCGACTACTCGGCGCACGGCGGTGCCTTTCCGATTAATTTAGCCGGGCTCGGCTGCATCGGCACCATCAGCATTT CCGGCTCGCCGCAGCTGGAGGATCATAATCTGCTGGTCAGCACCCTGGCTCACTTTCTCGGCTTATCCCTGCCGGCAGTG CATTAA
Upstream 100 bases:
>100_bases GATTAATAATAGACTAGCAGTTCTATGTTATTTCCAAGGTATCTATCCCACCGGCCCGGTTCAGGATAGTCTGTGGGTCA CCTTGAGAGGAGCGACAGCT
Downstream 100 bases:
>100_bases GCGATAAAACTCACGCTATTCTCTTTAGGCTGGCCGCCAGAGTCGCGACCAGCCTGCCGTCTGATATTTATCGCCGTTTT GAAAGATTCTACTTTCATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MNIDDDLQALTKQEATLTFSHFDHNTAWELGSALRSAAERARLSIAIEIQLAGQTLFYYAMPGTTPDIADWVRRKRNVVN HFHKSSYAIGLRLQQRQSTLEERYGLSVRDYSAHGGAFPINLAGLGCIGTISISGSPQLEDHNLLVSTLAHFLGLSLPAV H
Sequences:
>Translated_161_residues MNIDDDLQALTKQEATLTFSHFDHNTAWELGSALRSAAERARLSIAIEIQLAGQTLFYYAMPGTTPDIADWVRRKRNVVN HFHKSSYAIGLRLQQRQSTLEERYGLSVRDYSAHGGAFPINLAGLGCIGTISISGSPQLEDHNLLVSTLAHFLGLSLPAV H >Mature_161_residues MNIDDDLQALTKQEATLTFSHFDHNTAWELGSALRSAAERARLSIAIEIQLAGQTLFYYAMPGTTPDIADWVRRKRNVVN HFHKSSYAIGLRLQQRQSTLEERYGLSVRDYSAHGGAFPINLAGLGCIGTISISGSPQLEDHNLLVSTLAHFLGLSLPAV H
Specific function: Unknown
COG id: COG4702
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0303 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1996_SERP5 (A8GDA9)
Other databases:
- EMBL: CP000826 - RefSeq: YP_001478227.1 - ProteinModelPortal: A8GDA9 - STRING: A8GDA9 - GeneID: 5603502 - GenomeReviews: CP000826_GR - KEGG: spe:Spro_1996 - eggNOG: COG4702 - HOGENOM: HBG367719 - OMA: TNEDALQ - BioCyc: SPRO399741:SPRO_1996-MONOMER - HAMAP: MF_00761 - InterPro: IPR005624 - InterPro: IPR010371 - PIRSF: PIRSF008757
Pfam domain/function: PF03928 DUF336
EC number: NA
Molecular weight: Translated: 17744; Mature: 17744
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIDDDLQALTKQEATLTFSHFDHNTAWELGSALRSAAERARLSIAIEIQLAGQTLFYYA CCCCHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHCEEEEEEEEEECCCEEEEEE MPGTTPDIADWVRRKRNVVNHFHKSSYAIGLRLQQRQSTLEERYGLSVRDYSAHGGAFPI CCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHCCCEEEECCCCCCCEE NLAGLGCIGTISISGSPQLEDHNLLVSTLAHFLGLSLPAVH EECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNIDDDLQALTKQEATLTFSHFDHNTAWELGSALRSAAERARLSIAIEIQLAGQTLFYYA CCCCHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHCEEEEEEEEEECCCEEEEEE MPGTTPDIADWVRRKRNVVNHFHKSSYAIGLRLQQRQSTLEERYGLSVRDYSAHGGAFPI CCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHCCCEEEECCCCCCCEE NLAGLGCIGTISISGSPQLEDHNLLVSTLAHFLGLSLPAVH EECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA