| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is engD [H]
Identifier: 157370224
GI number: 157370224
Start: 2169368
End: 2170459
Strand: Reverse
Name: engD [H]
Synonym: Spro_1982
Alternate gene names: 157370224
Gene position: 2170459-2169368 (Counterclockwise)
Preceding gene: 157370226
Following gene: 157370223
Centisome position: 39.83
GC content: 56.78
Gene sequence:
>1092_bases ATGGGATTCAAATGCGGTATCGTCGGCCTGCCTAACGTAGGCAAATCCACCCTGTTCAACGCGTTGACCAAAGCGGGTAT CGAAGCAGCCAACTTCCCGTTCTGCACCATTGAACCTAATACCGGTGTGGTGCCGATGCCCGATTCGCGTCTGGACCAGT TGGCCGAGATCGTCAAACCCCAACGCATCCTGCCAACCACCATGGAATTCGTCGACATCGCCGGCCTGGTGAAAGGCGCG TCCAAAGGCGAAGGCCTGGGCAACCAGTTCCTGACCAACATCCGTGAAACCGAAGCTATCGGCCACGTAGTGCGTTGCTT CGAGAACGACAACATCATCCACGTGAACAACAAGGTTGACCCGGCTGACGACATCGAAGTGATCAACACCGAGCTGGCAC TGTCGGATCTGGACACCTGCGAACGCGCTATCCACCGCGTACAGAAGAAAGCCAAAGGCGGCGATAAAGACGCAAAAGCC GAGCTGGCCGCACTGGAAAAATGCCTGCCACAGCTGGAAAACGCCGGCATGCTGCGTGCACTGGATCTGTCCGATGAAGA CCGTGCAGCCATCCGCTACCTGAGTTTCCTGACGCTGAAGCCAACCATGTACATCGCCAACGTCAACGAAGACGGCTATG AGAACAACCCATACCTGGACAAAGTGCGCGAGATCGCTGCGGCCGAAGGTTCGGTCGTGGTTGCCGTGTGCGCCGCGGTT GAATCCGACATCGCCGAGCTGGAAGACGAAGACCGCGCCGAGTTTATGGCCGAGCTGGGTCTGGAAGAGCCAGGCCTGAA CCGCGTGATCCGCGCCGGTTACGAGCTGCTGAACCTGCAGACTTACTTCACTGCTGGCGTAAAAGAAGTTCGCGCCTGGA CCATCCCGGTTGGCGCTACCGCACCGCAGGCAGCCGGCAAGATCCACACCGACTTCGAGAAAGGCTTTATCCGCGCGCAG ACCATCGCTTTTGAAGACTTCATCACCTACAAGGGTGAGCAAGGCGCTAAAGAAGCTGGCAAAATGCGTTCAGAAGGTAA GGACTACATCGTCAAAGACGGCGACGTGATGAACTTCTTGTTTAACGTCTAA
Upstream 100 bases:
>100_bases AAAACGGCCATTACGTGTATAATGGCGCCATTATTTCGTCCTTTATGCAGTGGGTTAAACCTAACCGGCTGATAGTTAAG ATATTTAAGGTGATAACAAC
Downstream 100 bases:
>100_bases ACCTCGGTTTCTGCACCAGACTCCAAAATCCACGCCTTGGCGTGGATTTTTGTTTTCTGATTGTTTGAAATCTAGAGCGA ATATCGGCAAGGCATCTGAC
Product: GTP-dependent nucleic acid-binding protein EngD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDSRLDQLAEIVKPQRILPTTMEFVDIAGLVKGA SKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVDPADDIEVINTELALSDLDTCERAIHRVQKKAKGGDKDAKA ELAALEKCLPQLENAGMLRALDLSDEDRAAIRYLSFLTLKPTMYIANVNEDGYENNPYLDKVREIAAAEGSVVVAVCAAV ESDIAELEDEDRAEFMAELGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGATAPQAAGKIHTDFEKGFIRAQ TIAFEDFITYKGEQGAKEAGKMRSEGKDYIVKDGDVMNFLFNV
Sequences:
>Translated_363_residues MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDSRLDQLAEIVKPQRILPTTMEFVDIAGLVKGA SKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVDPADDIEVINTELALSDLDTCERAIHRVQKKAKGGDKDAKA ELAALEKCLPQLENAGMLRALDLSDEDRAAIRYLSFLTLKPTMYIANVNEDGYENNPYLDKVREIAAAEGSVVVAVCAAV ESDIAELEDEDRAEFMAELGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGATAPQAAGKIHTDFEKGFIRAQ TIAFEDFITYKGEQGAKEAGKMRSEGKDYIVKDGDVMNFLFNV >Mature_362_residues GFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDSRLDQLAEIVKPQRILPTTMEFVDIAGLVKGAS KGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVDPADDIEVINTELALSDLDTCERAIHRVQKKAKGGDKDAKAE LAALEKCLPQLENAGMLRALDLSDEDRAAIRYLSFLTLKPTMYIANVNEDGYENNPYLDKVREIAAAEGSVVVAVCAAVE SDIAELEDEDRAEFMAELGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGATAPQAAGKIHTDFEKGFIRAQT IAFEDFITYKGEQGAKEAGKMRSEGKDYIVKDGDVMNFLFNV
Specific function: GTP-dependent nucleic acid-binding protein which may act as a translation factor [H]
COG id: COG0012
COG function: function code J; Predicted GTPase, probable translation factor
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI58761500, Length=368, Percent_Identity=44.5652173913043, Blast_Score=305, Evalue=6e-83, Organism=Homo sapiens, GI58761502, Length=227, Percent_Identity=39.2070484581498, Blast_Score=154, Evalue=2e-37, Organism=Escherichia coli, GI1787454, Length=363, Percent_Identity=93.9393939393939, Blast_Score=703, Evalue=0.0, Organism=Escherichia coli, GI1789574, Length=127, Percent_Identity=29.9212598425197, Blast_Score=66, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17509631, Length=365, Percent_Identity=40.8219178082192, Blast_Score=284, Evalue=4e-77, Organism=Saccharomyces cerevisiae, GI6319499, Length=368, Percent_Identity=39.1304347826087, Blast_Score=252, Evalue=6e-68, Organism=Saccharomyces cerevisiae, GI6321773, Length=381, Percent_Identity=34.3832020997375, Blast_Score=191, Evalue=2e-49, Organism=Saccharomyces cerevisiae, GI6321649, Length=142, Percent_Identity=39.4366197183099, Blast_Score=85, Evalue=2e-17, Organism=Drosophila melanogaster, GI24640873, Length=366, Percent_Identity=42.896174863388, Blast_Score=297, Evalue=6e-81, Organism=Drosophila melanogaster, GI24640877, Length=366, Percent_Identity=42.896174863388, Blast_Score=297, Evalue=6e-81, Organism=Drosophila melanogaster, GI24640875, Length=366, Percent_Identity=42.896174863388, Blast_Score=297, Evalue=6e-81, Organism=Drosophila melanogaster, GI24640879, Length=328, Percent_Identity=40.5487804878049, Blast_Score=242, Evalue=2e-64,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012675 - InterPro: IPR004396 - InterPro: IPR013029 - InterPro: IPR006073 - InterPro: IPR002917 - InterPro: IPR012676 - InterPro: IPR023192 [H]
Pfam domain/function: PF01926 MMR_HSR1; PF06071 YchF-GTPase_C [H]
EC number: NA
Molecular weight: Translated: 39650; Mature: 39518
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: PS00443 GATASE_TYPE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDSRLDQLAEIVKP CCEEECEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCEEECCHHHHHHHHHHHCC QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD CCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC PADDIEVINTELALSDLDTCERAIHRVQKKAKGGDKDAKAELAALEKCLPQLENAGMLRA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEE LDLSDEDRAAIRYLSFLTLKPTMYIANVNEDGYENNPYLDKVREIAAAEGSVVVAVCAAV ECCCCCHHHHHHHHHHHEECCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHH ESDIAELEDEDRAEFMAELGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT HHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCC APQAAGKIHTDFEKGFIRAQTIAFEDFITYKGEQGAKEAGKMRSEGKDYIVKDGDVMNFL CCHHCCCCCCHHHHCHHHHHHEEHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCHHHHHH FNV HCC >Mature Secondary Structure GFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDSRLDQLAEIVKP CEEECEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCEEECCHHHHHHHHHHHCC QRILPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVNNKVD CCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC PADDIEVINTELALSDLDTCERAIHRVQKKAKGGDKDAKAELAALEKCLPQLENAGMLRA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEE LDLSDEDRAAIRYLSFLTLKPTMYIANVNEDGYENNPYLDKVREIAAAEGSVVVAVCAAV ECCCCCHHHHHHHHHHHEECCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHH ESDIAELEDEDRAEFMAELGLEEPGLNRVIRAGYELLNLQTYFTAGVKEVRAWTIPVGAT HHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCC APQAAGKIHTDFEKGFIRAQTIAFEDFITYKGEQGAKEAGKMRSEGKDYIVKDGDVMNFL CCHHCCCCCCHHHHCHHHHHHEEHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCHHHHHH FNV HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]