| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is ebgC [H]
Identifier: 157370216
GI number: 157370216
Start: 2161587
End: 2162039
Strand: Direct
Name: ebgC [H]
Synonym: Spro_1974
Alternate gene names: 157370216
Gene position: 2161587-2162039 (Clockwise)
Preceding gene: 157370215
Following gene: 157370217
Centisome position: 39.67
GC content: 48.57
Gene sequence:
>453_bases ATGATTATTGTCGAATCATTAGCGGAGTTTCAGCTTATTTACCGCGCCGGGAAAAAATGGCAACGCTGTATGGAGGCCAT CAATAATATTGAACGCATCGAGCCCGATGTCTTTTATTCAGTTGGCGACTCGCTGGTTTACCGGTTGGTGTCCGGCCCGG GCCAACAACATGGCTGGCTGGAGGGGAATCGCCGCTATTTTGATCTGCACTATTACCTTGCCGGCCAGGAAACTATCGAG ATTGCCGATAAGTGCGAGCTGACTTCGGTGGTGGCCTATCAGGATGAAACCGACCGCGAGTTTTTCAGCGGGCAGGGCGA GCCACACCGGGTAGGGCAAGGGAATGTCGTTATCTTTGAGAATCACCAGGCCTATCGTTTTAAAGAAAGTCACCAGGTAA AAAAAGTCATTTTAAAAGTGACGGTAGAAGACAGCTATTTCCTTAATAAATAG
Upstream 100 bases:
>100_bases CGCTGGTGCCGTTTAACCGGCAGGAAACCGAGGCGGCTACGCTTGCCGGCTATCGTTTTTCACCGGCCATTAATAACGCT CAGTCAGAAGAGGCGAACTT
Downstream 100 bases:
>100_bases CCGAACTCCTAATTAAAAATAAGCCCCATTGCTTTCAGGTTGCCGCCGGCAAGGCTGCAGCTTGAAAGACAAGGGGAAAT AAACCGATTAAGTACCCTAC
Product: cryptic beta-D-galactosidase subunit beta
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MIIVESLAEFQLIYRAGKKWQRCMEAINNIERIEPDVFYSVGDSLVYRLVSGPGQQHGWLEGNRRYFDLHYYLAGQETIE IADKCELTSVVAYQDETDREFFSGQGEPHRVGQGNVVIFENHQAYRFKESHQVKKVILKVTVEDSYFLNK
Sequences:
>Translated_150_residues MIIVESLAEFQLIYRAGKKWQRCMEAINNIERIEPDVFYSVGDSLVYRLVSGPGQQHGWLEGNRRYFDLHYYLAGQETIE IADKCELTSVVAYQDETDREFFSGQGEPHRVGQGNVVIFENHQAYRFKESHQVKKVILKVTVEDSYFLNK >Mature_150_residues MIIVESLAEFQLIYRAGKKWQRCMEAINNIERIEPDVFYSVGDSLVYRLVSGPGQQHGWLEGNRRYFDLHYYLAGQETIE IADKCELTSVVAYQDETDREFFSGQGEPHRVGQGNVVIFENHQAYRFKESHQVKKVILKVTVEDSYFLNK
Specific function: Required for full activity of the ebgA enzyme. Exact function not known [H]
COG id: COG2731
COG function: function code G; Beta-galactosidase, beta subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789458, Length=150, Percent_Identity=52.6666666666667, Blast_Score=154, Evalue=2e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004375 [H]
Pfam domain/function: PF04074 DUF386 [H]
EC number: 3.2.1.23
Molecular weight: Translated: 17499; Mature: 17499
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIVESLAEFQLIYRAGKKWQRCMEAINNIERIEPDVFYSVGDSLVYRLVSGPGQQHGWL CEEHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCC EGNRRYFDLHYYLAGQETIEIADKCELTSVVAYQDETDREFFSGQGEPHRVGQGNVVIFE CCCCEEEEEEEEECCCCEEEHHHHCCEEEEEEECCCCCHHHHCCCCCCCCCCCCCEEEEE NHQAYRFKESHQVKKVILKVTVEDSYFLNK CCCCEEECHHHHHEEEEEEEEECCCEECCC >Mature Secondary Structure MIIVESLAEFQLIYRAGKKWQRCMEAINNIERIEPDVFYSVGDSLVYRLVSGPGQQHGWL CEEHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCC EGNRRYFDLHYYLAGQETIEIADKCELTSVVAYQDETDREFFSGQGEPHRVGQGNVVIFE CCCCEEEEEEEEECCCCEEEHHHHCCEEEEEEECCCCCHHHHCCCCCCCCCCCCCEEEEE NHQAYRFKESHQVKKVILKVTVEDSYFLNK CCCCEEECHHHHHEEEEEEEEECCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]