Click here to switch to the map view.

The map label for this gene is dksA [H]

Identifier: 157370181

GI number: 157370181

Start: 2124614

End: 2125039

Strand: Direct

Name: dksA [H]

Synonym: Spro_1939

Alternate gene names: 157370181

Gene position: 2124614-2125039 (Clockwise)

Preceding gene: 157370179

Following gene: 157370182

Centisome position: 38.99

GC content: 57.98

Gene sequence:

>426_bases
ATGAACGTTGTGACCTTACTAAACCAACAGCAGCTCCTGGCCATGCCGGAGTCTGATTACATGAACCCGGCGCAGCGGGC
ATTTTTCCGCCAGCGCTTGCAGGACGAGCAACAAAAACTGTTGCAGCACATTGAAGCGCTGAAGAGAGATATCGACGGCG
GCGAGGTGTCCGGCGACGAAGCGGACAAAGCCGCCCGCGAGGAAGACTTGCGATTGCTTTTCCGCCAGTTGGATCGTGAA
AGCCGCCTGCTGCCGAAAATCAGCGCGGCGCTGACGCGATTACATAACGGCGAATACGGCTATTGCCGTGAAAGCGGCGA
GCCTATCGGGCTGGCGCGCCTGTTGCTGCGGCCGACGGCGGAGCTAAGCATTGAAGCCAAAACCGCTCAGGAAATGCGTG
AGCCACATCTGCGTAAACGGGGTTAA

Upstream 100 bases:

>100_bases
AATCGATTGTTTATAGGTGCAATTTTGTTTTCTTATGCATGGCTGCTTAATTATTGTGATATGTTATAATATAACAATTA
AATATTAACCGGAGAGCGCT

Downstream 100 bases:

>100_bases
GTTCACGGCTGGCTACTCGTGGCCAGCCGGTATTTTGCCGTCAGTTCGTATTCATTTTAAGCAAACGCACCCTAACTTGT
TGGGGAGGGTAGGAGTTTTC

Product: TraR/DksA family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MNVVTLLNQQQLLAMPESDYMNPAQRAFFRQRLQDEQQKLLQHIEALKRDIDGGEVSGDEADKAAREEDLRLLFRQLDRE
SRLLPKISAALTRLHNGEYGYCRESGEPIGLARLLLRPTAELSIEAKTAQEMREPHLRKRG

Sequences:

>Translated_141_residues
MNVVTLLNQQQLLAMPESDYMNPAQRAFFRQRLQDEQQKLLQHIEALKRDIDGGEVSGDEADKAAREEDLRLLFRQLDRE
SRLLPKISAALTRLHNGEYGYCRESGEPIGLARLLLRPTAELSIEAKTAQEMREPHLRKRG
>Mature_141_residues
MNVVTLLNQQQLLAMPESDYMNPAQRAFFRQRLQDEQQKLLQHIEALKRDIDGGEVSGDEADKAAREEDLRLLFRQLDRE
SRLLPKISAALTRLHNGEYGYCRESGEPIGLARLLLRPTAELSIEAKTAQEMREPHLRKRG

Specific function: Dosage-Dependent Suppressor Of A Dnak Deletion Mutation. It Suppressed Not Only The Temperature-Sensitive Growth But Also The Filamentous Phenotype Of The Dnak Deletion Strain, While The Defect Of Lambda Growth Is Not Suppressed. [C]

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 dksA C4-type zinc finger [H]

Homologues:

Organism=Escherichia coli, GI1786338, Length=129, Percent_Identity=37.2093023255814, Blast_Score=82, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012784
- InterPro:   IPR000962
- InterPro:   IPR020458 [H]

Pfam domain/function: PF01258 zf-dskA_traR [H]

EC number: NA

Molecular weight: Translated: 16223; Mature: 16223

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVVTLLNQQQLLAMPESDYMNPAQRAFFRQRLQDEQQKLLQHIEALKRDIDGGEVSGDE
CCHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
ADKAAREEDLRLLFRQLDRESRLLPKISAALTRLHNGEYGYCRESGEPIGLARLLLRPTA
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCH
ELSIEAKTAQEMREPHLRKRG
HHEEHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNVVTLLNQQQLLAMPESDYMNPAQRAFFRQRLQDEQQKLLQHIEALKRDIDGGEVSGDE
CCHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
ADKAAREEDLRLLFRQLDRESRLLPKISAALTRLHNGEYGYCRESGEPIGLARLLLRPTA
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCH
ELSIEAKTAQEMREPHLRKRG
HHEEHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9555902 [H]