| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is nagZ [H]
Identifier: 157370166
GI number: 157370166
Start: 2105451
End: 2106470
Strand: Direct
Name: nagZ [H]
Synonym: Spro_1924
Alternate gene names: 157370166
Gene position: 2105451-2106470 (Clockwise)
Preceding gene: 157370165
Following gene: 157370167
Centisome position: 38.64
GC content: 59.71
Gene sequence:
>1020_bases ATGTTAGATGTCGCCAGCTATGAGCTGGACGCGGAAGAACGTGAGATCCTGCAACACCCGATGGTGGGCGGCCTGATCTT GTTCACCCGCAATTTCCACGATGCGCAACAGTTGCGCGAGCTGGTACGCCAAATCCGCGAGGCTTCTCACGATCGGCTGG TGGTGGCGGTGGATCAGGAAGGTGGCCGTGTGCAGCGCTTCCGCGAGGGTTTCACCCGTCTGCCGGCGGCGCAGTCATTC GCCGCATTAAACGAAGTGCATGAGGGCGGGCGTCTGGCACAGGAGGCGGGCTGGTTGATGGCGGCGGAAATGATCGCGCA GGATATCGATATCAGTTTTGCCCCGGTACTGGATATTGGCCACGTCAGTGCGGCGATTGGCGAGCGCTCGTTCCACAGCG ATCCGCAGCAGGCGCTGGCGATGGCAGAGCGCTTCATTCTGGGCATGCACAGCGCCGGGATGAAAACCACCGGCAAGCAT TTCCCTGGCCACGGTGCCGTCAGTGCGGACTCGCACAAAGAAACCCCGCGCGATCCGCGTCCGCTCGCTGAGATCCGCGA ACATGATATGGCGATCTTCCGTGAATTGATTAACCGTCAGCTGCTCGACGCCGTGATGCCGGCACACGTCATCTATACTG AAGCAGACCCACGTCCCGCCAGCGGCTCGCCTTACTGGCTAAAACAGATCCTGCGTCAGGAATTGGGCTTTGATGGCGTT ATCTTCTCGGACGATTTGTCGATGGAAGGGGCGGCGATTATGGGCAGTTATGCCGAGCGCGGCCAGGCAGCACTGGATGC CGGTTGTGACATGATCCTGGTGTGTAATAACCGCGCCGGGGCGGTCAGCGTGCTGGATAACCTGTCCCCGGTCAAAGCAG AGCGGGTGAAGCGGTTATATCATCGCGGTCAGTTCACCCGTCAGGAATTGCGTGATTCTGCGCGCTGGCAACAGGCGCAT AAAGAACTGAATGCGCTCAGCGAACGCTGGGAAGAGCACAAACAGCGTAATGCCGGGTGA
Upstream 100 bases:
>100_bases CCCGAATTTTTGCGCTGGGGCGCAGTGTTGCACCGGCGTTTTTGTTTAACATCCCCATGTTCTGAATAAATAGTGAAGTG AGGTGGCCGTGGGCCCAGTA
Downstream 100 bases:
>100_bases ACCCAGGACGTCGTAGTGCGGCGTAAATGATGAGGGCTGCGGCGCGGCCCTCCGTTTGTTGCGAGGATCCAGATGATTAT CTATTTACATGGCTTTGATT
Product: beta-hexosaminidase
Products: NA
Alternate protein names: Beta-N-acetylhexosaminidase; N-acetyl-beta-glucosaminidase [H]
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MLDVASYELDAEEREILQHPMVGGLILFTRNFHDAQQLRELVRQIREASHDRLVVAVDQEGGRVQRFREGFTRLPAAQSF AALNEVHEGGRLAQEAGWLMAAEMIAQDIDISFAPVLDIGHVSAAIGERSFHSDPQQALAMAERFILGMHSAGMKTTGKH FPGHGAVSADSHKETPRDPRPLAEIREHDMAIFRELINRQLLDAVMPAHVIYTEADPRPASGSPYWLKQILRQELGFDGV IFSDDLSMEGAAIMGSYAERGQAALDAGCDMILVCNNRAGAVSVLDNLSPVKAERVKRLYHRGQFTRQELRDSARWQQAH KELNALSERWEEHKQRNAG
Sequences:
>Translated_339_residues MLDVASYELDAEEREILQHPMVGGLILFTRNFHDAQQLRELVRQIREASHDRLVVAVDQEGGRVQRFREGFTRLPAAQSF AALNEVHEGGRLAQEAGWLMAAEMIAQDIDISFAPVLDIGHVSAAIGERSFHSDPQQALAMAERFILGMHSAGMKTTGKH FPGHGAVSADSHKETPRDPRPLAEIREHDMAIFRELINRQLLDAVMPAHVIYTEADPRPASGSPYWLKQILRQELGFDGV IFSDDLSMEGAAIMGSYAERGQAALDAGCDMILVCNNRAGAVSVLDNLSPVKAERVKRLYHRGQFTRQELRDSARWQQAH KELNALSERWEEHKQRNAG >Mature_339_residues MLDVASYELDAEEREILQHPMVGGLILFTRNFHDAQQLRELVRQIREASHDRLVVAVDQEGGRVQRFREGFTRLPAAQSF AALNEVHEGGRLAQEAGWLMAAEMIAQDIDISFAPVLDIGHVSAAIGERSFHSDPQQALAMAERFILGMHSAGMKTTGKH FPGHGAVSADSHKETPRDPRPLAEIREHDMAIFRELINRQLLDAVMPAHVIYTEADPRPASGSPYWLKQILRQELGFDGV IFSDDLSMEGAAIMGSYAERGQAALDAGCDMILVCNNRAGAVSVLDNLSPVKAERVKRLYHRGQFTRQELRDSARWQQAH KELNALSERWEEHKQRNAG
Specific function: Cleaves GlcNAc linked beta-1,4 to MurNAc tripeptides [H]
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family. NagZ subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787350, Length=334, Percent_Identity=81.1377245508982, Blast_Score=571, Evalue=1e-164,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022956 - InterPro: IPR019800 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3 [H]
EC number: =3.2.1.52 [H]
Molecular weight: Translated: 37900; Mature: 37900
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: PS00775 GLYCOSYL_HYDROL_F3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDVASYELDAEEREILQHPMVGGLILFTRNFHDAQQLRELVRQIREASHDRLVVAVDQE CCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCC GGRVQRFREGFTRLPAAQSFAALNEVHEGGRLAQEAGWLMAAEMIAQDIDISFAPVLDIG CCHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH HVSAAIGERSFHSDPQQALAMAERFILGMHSAGMKTTGKHFPGHGAVSADSHKETPRDPR HHHHHHHCHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PLAEIREHDMAIFRELINRQLLDAVMPAHVIYTEADPRPASGSPYWLKQILRQELGFDGV HHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCCCHHHHHHHHHHCCCCCE IFSDDLSMEGAAIMGSYAERGQAALDAGCDMILVCNNRAGAVSVLDNLSPVKAERVKRLY EECCCCCCCCHHHHHHHHHHCHHHHHCCCCEEEEECCCCCHHHHHHCCCCHHHHHHHHHH HRGQFTRQELRDSARWQQAHKELNALSERWEEHKQRNAG HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLDVASYELDAEEREILQHPMVGGLILFTRNFHDAQQLRELVRQIREASHDRLVVAVDQE CCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCC GGRVQRFREGFTRLPAAQSFAALNEVHEGGRLAQEAGWLMAAEMIAQDIDISFAPVLDIG CCHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH HVSAAIGERSFHSDPQQALAMAERFILGMHSAGMKTTGKHFPGHGAVSADSHKETPRDPR HHHHHHHCHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PLAEIREHDMAIFRELINRQLLDAVMPAHVIYTEADPRPASGSPYWLKQILRQELGFDGV HHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCCCHHHHHHHHHHCCCCCE IFSDDLSMEGAAIMGSYAERGQAALDAGCDMILVCNNRAGAVSVLDNLSPVKAERVKRLY EECCCCCCCCHHHHHHHHHHCHHHHHCCCCEEEEECCCCCHHHHHHCCCCHHHHHHHHHH HRGQFTRQELRDSARWQQAHKELNALSERWEEHKQRNAG HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA