| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is thiK [H]
Identifier: 157370165
GI number: 157370165
Start: 2104550
End: 2105419
Strand: Direct
Name: thiK [H]
Synonym: Spro_1923
Alternate gene names: 157370165
Gene position: 2104550-2105419 (Clockwise)
Preceding gene: 157370164
Following gene: 157370166
Centisome position: 38.62
GC content: 56.78
Gene sequence:
>870_bases ATGGCGCCGTTACACACTGAAGCCGCACTGCGAAGACTGATTGAGCACGAACTGCCGGCGGTGAAAACCGCCGGTTGTCG TTTCAGCCCGGTGCAGGGACTGACCGGTGAAAGCTGGCGGATTGAAGGCGAGGGCGTGCAGCTATTGGCTCGCCAGCAAA GCGCAGAGAAAAGCGCGTTGGGCGTCAGTCGCCGGCGTGAGGCGCGGGTGCTGTGTCGTGTCGGTAAGGACATTGGGCCG CAGGTTTTAGCGCAGAATAATCAGTGGATTATCTTGCAATGGCTCACTGGTGACGTTGTCACTGAGGCGAATTTTACCCG CTTGAATGAGGGCGGCAATCTGGCTGAGTTGATGGCCGGTTTGCATCAACGGTCGCCCAGTGGTTACCCGCTGAGCCTGC ATCGGCAGTTTACTCGTTACTGGCAGCAGCTGGATCCCCGACGCCTGACACCCGCCTGGCTAAAGTTACATCAGCGTTTT CTGCGTCGTCGGCCCCCAACGCCGCTAAAACTGGCTCCCCTGCATATGGATATTCATCCGGGCAATCTGATTGCACAGGG CCAGGGTTTGCGGCTGATTGATTGGGAGTATTCGGCCGACGGGGATATCGCGCTGGACATCGCCGCACTGTTTCGCGGCA ATGCCTGGTCGCCAGCCGAACAACTGCGATTTTTACGGCATTATGCTCGCATCGGCTACTCAAATTTACCCTTGCTGAGC GCACAGGTGCAGCGTTGGTTGCCGTGGGTAGATTATCTGATGCTGTTATGGTTTGAAGTGCGCTGGCAACAAACCGGCGA TCCCGAATTTTTGCGCTGGGGCGCAGTGTTGCACCGGCGTTTTTGTTTAACATCCCCATGTTCTGAATAA
Upstream 100 bases:
>100_bases CAGTATGTGCTGTACAGCGACGTCAGTGGTGATGTGAAGTCACCTACGCTGGATATGCAATTGATGCTGGTGCAAAGCGG TGAAATCGTCTGGTCAGGCA
Downstream 100 bases:
>100_bases ATAGTGAAGTGAGGTGGCCGTGGGCCCAGTAATGTTAGATGTCGCCAGCTATGAGCTGGACGCGGAAGAACGTGAGATCC TGCAACACCCGATGGTGGGC
Product: thiamine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MAPLHTEAALRRLIEHELPAVKTAGCRFSPVQGLTGESWRIEGEGVQLLARQQSAEKSALGVSRRREARVLCRVGKDIGP QVLAQNNQWIILQWLTGDVVTEANFTRLNEGGNLAELMAGLHQRSPSGYPLSLHRQFTRYWQQLDPRRLTPAWLKLHQRF LRRRPPTPLKLAPLHMDIHPGNLIAQGQGLRLIDWEYSADGDIALDIAALFRGNAWSPAEQLRFLRHYARIGYSNLPLLS AQVQRWLPWVDYLMLLWFEVRWQQTGDPEFLRWGAVLHRRFCLTSPCSE
Sequences:
>Translated_289_residues MAPLHTEAALRRLIEHELPAVKTAGCRFSPVQGLTGESWRIEGEGVQLLARQQSAEKSALGVSRRREARVLCRVGKDIGP QVLAQNNQWIILQWLTGDVVTEANFTRLNEGGNLAELMAGLHQRSPSGYPLSLHRQFTRYWQQLDPRRLTPAWLKLHQRF LRRRPPTPLKLAPLHMDIHPGNLIAQGQGLRLIDWEYSADGDIALDIAALFRGNAWSPAEQLRFLRHYARIGYSNLPLLS AQVQRWLPWVDYLMLLWFEVRWQQTGDPEFLRWGAVLHRRFCLTSPCSE >Mature_288_residues APLHTEAALRRLIEHELPAVKTAGCRFSPVQGLTGESWRIEGEGVQLLARQQSAEKSALGVSRRREARVLCRVGKDIGPQ VLAQNNQWIILQWLTGDVVTEANFTRLNEGGNLAELMAGLHQRSPSGYPLSLHRQFTRYWQQLDPRRLTPAWLKLHQRFL RRRPPTPLKLAPLHMDIHPGNLIAQGQGLRLIDWEYSADGDIALDIAALFRGNAWSPAEQLRFLRHYARIGYSNLPLLSA QVQRWLPWVDYLMLLWFEVRWQQTGDPEFLRWGAVLHRRFCLTSPCSE
Specific function: Catalyzes the phosphorylation of thiamine to thiamine phosphate [H]
COG id: COG0510
COG function: function code M; Predicted choline kinase involved in LPS biosynthesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiamine kinase family [H]
Homologues:
Organism=Escherichia coli, GI1787349, Length=240, Percent_Identity=38.3333333333333, Blast_Score=152, Evalue=2e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002575 - InterPro: IPR011009 - InterPro: IPR014093 [H]
Pfam domain/function: PF01636 APH [H]
EC number: =2.7.1.89 [H]
Molecular weight: Translated: 33201; Mature: 33069
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPLHTEAALRRLIEHELPAVKTAGCRFSPVQGLTGESWRIEGEGVQLLARQQSAEKSAL CCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHH GVSRRREARVLCRVGKDIGPQVLAQNNQWIILQWLTGDVVTEANFTRLNEGGNLAELMAG HHHHHHHHHHHHHHCCCCCCHHEECCCCEEEEEEECCCEEECCCCEEECCCCCHHHHHHH LHQRSPSGYPLSLHRQFTRYWQQLDPRRLTPAWLKLHQRFLRRRPPTPLKLAPLHMDIHP HHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEECC GNLIAQGQGLRLIDWEYSADGDIALDIAALFRGNAWSPAEQLRFLRHYARIGYSNLPLLS CCEEECCCCCEEEEECCCCCCCCEEEHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHH AQVQRWLPWVDYLMLLWFEVRWQQTGDPEFLRWGAVLHRRFCLTSPCSE HHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure APLHTEAALRRLIEHELPAVKTAGCRFSPVQGLTGESWRIEGEGVQLLARQQSAEKSAL CCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHH GVSRRREARVLCRVGKDIGPQVLAQNNQWIILQWLTGDVVTEANFTRLNEGGNLAELMAG HHHHHHHHHHHHHHCCCCCCHHEECCCCEEEEEEECCCEEECCCCEEECCCCCHHHHHHH LHQRSPSGYPLSLHRQFTRYWQQLDPRRLTPAWLKLHQRFLRRRPPTPLKLAPLHMDIHP HHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEECC GNLIAQGQGLRLIDWEYSADGDIALDIAALFRGNAWSPAEQLRFLRHYARIGYSNLPLLS CCEEECCCCCEEEEECCCCCCCCEEEHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHH AQVQRWLPWVDYLMLLWFEVRWQQTGDPEFLRWGAVLHRRFCLTSPCSE HHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA