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The map label for this gene is ytfH [C]

Identifier: 157370160

GI number: 157370160

Start: 2101668

End: 2102045

Strand: Direct

Name: ytfH [C]

Synonym: Spro_1918

Alternate gene names: 157370160

Gene position: 2101668-2102045 (Clockwise)

Preceding gene: 157370158

Following gene: 157370162

Centisome position: 38.57

GC content: 59.52

Gene sequence:

>378_bases
ATGACCGATGCAGGGCGTTCGACAGCGGAAAAAAATTTAGCGGTGTTACCGGCCGCGGGCGAACCTTGCCCAATGGTGGG
TTTTGTGAATCTGGTGGCGGGGAAATGGGCGATCCCGATCCTTTACCGACTGATATTGATCGACAGCCCGGTGCGTTTCA
GCGAGTTGCAGCGTGCCGTGGCACCGATCGCCCAGAAAGAGCTGACACGCCAACTGCGGCAGTTTGAACAGCGCGGCCTG
GTCACGCGACAGGTGTTCCCGGAAGTCCCGCCGCGTGTTGAATACCAGATTACGCCGCTGGGCAAAACGCTGCGCCCGAC
GCTCGACTCGTTGGCCAACTGGATGCGCACACACGCACCCCAGTTGATAGAAGCTTAG

Upstream 100 bases:

>100_bases
TAGCCCACTCCCGTTTGTTGTCGATGCAAGCATTATTTGCGCTATAGTACCTTTTGCATAGTAGGCACCTTTTGGATACT
AAGGGACAAGGTGGGATGAA

Downstream 100 bases:

>100_bases
TCGCCAATGCCCGGCGGGTTGATGGTAGAGCGTGGGACCTTCTCATCGCGCTCGCCCCAACGGTCCAGCACCTGGCCGTA
CTCGCCGCTGGCGATCACCC

Product: HxlR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MTDAGRSTAEKNLAVLPAAGEPCPMVGFVNLVAGKWAIPILYRLILIDSPVRFSELQRAVAPIAQKELTRQLRQFEQRGL
VTRQVFPEVPPRVEYQITPLGKTLRPTLDSLANWMRTHAPQLIEA

Sequences:

>Translated_125_residues
MTDAGRSTAEKNLAVLPAAGEPCPMVGFVNLVAGKWAIPILYRLILIDSPVRFSELQRAVAPIAQKELTRQLRQFEQRGL
VTRQVFPEVPPRVEYQITPLGKTLRPTLDSLANWMRTHAPQLIEA
>Mature_124_residues
TDAGRSTAEKNLAVLPAAGEPCPMVGFVNLVAGKWAIPILYRLILIDSPVRFSELQRAVAPIAQKELTRQLRQFEQRGLV
TRQVFPEVPPRVEYQITPLGKTLRPTLDSLANWMRTHAPQLIEA

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=104, Percent_Identity=33.6538461538462, Blast_Score=75, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 13986; Mature: 13854

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDAGRSTAEKNLAVLPAAGEPCPMVGFVNLVAGKWAIPILYRLILIDSPVRFSELQRAV
CCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHH
APIAQKELTRQLRQFEQRGLVTRQVFPEVPPRVEYQITPLGKTLRPTLDSLANWMRTHAP
HHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCH
QLIEA
HHHCC
>Mature Secondary Structure 
TDAGRSTAEKNLAVLPAAGEPCPMVGFVNLVAGKWAIPILYRLILIDSPVRFSELQRAV
CCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHH
APIAQKELTRQLRQFEQRGLVTRQVFPEVPPRVEYQITPLGKTLRPTLDSLANWMRTHAP
HHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCH
QLIEA
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]