Click here to switch to the map view.

The map label for this gene is licB [H]

Identifier: 157370097

GI number: 157370097

Start: 2038312

End: 2038617

Strand: Direct

Name: licB [H]

Synonym: Spro_1855

Alternate gene names: 157370097

Gene position: 2038312-2038617 (Clockwise)

Preceding gene: 157370094

Following gene: 157370098

Centisome position: 37.41

GC content: 55.23

Gene sequence:

>306_bases
ATGCAAACAATCGTCTTATGCTGCGCCGCAGGAATGTCGACCAGCATGTTGGTACAAAAAATGAAAAACGAAGCGCAAAA
ACGGGCGCTGGATATCGAGATCGAAGCCGTTCCGGTGGCAGATTTTGAACGCATCCTGGGGCGGGCAGACATTGTCCTGC
TGGGGCCGCAGGTGAAATATGAACATGCGCGGCTGGCCGAACTGGCCGCACCATTGGGAAAAGCCGTAGCGGTTATCGAC
ATGATGGATTACGGCACCATGCGCGGCGATAAGGTACTGGACAAGGCGCTTAGCCTGCTGGCCTGA

Upstream 100 bases:

>100_bases
AGCATAATCAAATCGTATGGTTCCAGGGTATTTACAAGCGTGTTACAGAGCTGTTTTATATTTGAACAGCCGTGGTGGCT
AACAACCGGGACACTGAAAA

Downstream 100 bases:

>100_bases
TAACACTCTGGGGACGCAGTTCCCCATATTCCTTTATTTATTGAATTACCACGGGTTATTTCATTAACCCGCGGTGGGAT
CGCCGTGTCTGGAACCAGGC

Product: phosphotransferase system lactose/cellobiose-specific IIB subunit

Products: NA

Alternate protein names: EIIB-Lic; PTS system lichenan-specific EIIB component [H]

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MQTIVLCCAAGMSTSMLVQKMKNEAQKRALDIEIEAVPVADFERILGRADIVLLGPQVKYEHARLAELAAPLGKAVAVID
MMDYGTMRGDKVLDKALSLLA

Sequences:

>Translated_101_residues
MQTIVLCCAAGMSTSMLVQKMKNEAQKRALDIEIEAVPVADFERILGRADIVLLGPQVKYEHARLAELAAPLGKAVAVID
MMDYGTMRGDKVLDKALSLLA
>Mature_101_residues
MQTIVLCCAAGMSTSMLVQKMKNEAQKRALDIEIEAVPVADFERILGRADIVLLGPQVKYEHARLAELAAPLGKAVAVID
MMDYGTMRGDKVLDKALSLLA

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIB type-3 domain [H]

Homologues:

Organism=Escherichia coli, GI1788034, Length=96, Percent_Identity=42.7083333333333, Blast_Score=63, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014350
- InterPro:   IPR003501
- InterPro:   IPR013012 [H]

Pfam domain/function: PF02302 PTS_IIB [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 10945; Mature: 10945

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: PS51100 PTS_EIIB_TYPE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
6.9 %Met     (Translated Protein)
8.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
6.9 %Met     (Mature Protein)
8.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTIVLCCAAGMSTSMLVQKMKNEAQKRALDIEIEAVPVADFERILGRADIVLLGPQVKY
CCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHCCCCEEEECCCCCC
EHARLAELAAPLGKAVAVIDMMDYGTMRGDKVLDKALSLLA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MQTIVLCCAAGMSTSMLVQKMKNEAQKRALDIEIEAVPVADFERILGRADIVLLGPQVKY
CCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHCCCCEEEECCCCCC
EHARLAELAAPLGKAVAVIDMMDYGTMRGDKVLDKALSLLA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8990303; 8969509; 9384377 [H]