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The map label for this gene is yfjY [H]

Identifier: 157370015

GI number: 157370015

Start: 1948441

End: 1948923

Strand: Reverse

Name: yfjY [H]

Synonym: Spro_1772

Alternate gene names: 157370015

Gene position: 1948923-1948441 (Counterclockwise)

Preceding gene: 157370016

Following gene: 157370014

Centisome position: 35.77

GC content: 55.07

Gene sequence:

>483_bases
ATGATGAATACAACCCTATCCCCATCAGTGACGGAACTGCCGTTACCCACGCAACGTACCATTCAGCGCGCGTTAGCCTT
GCTGGAACAGCATCTGCGTAAACCCGGCGAGTCATTCACCTCACCCGATGCGGTTCGCCACTGGTTATGTCTGCAGATGG
CCGGACTGGAGCGCGAGGTCTTTATGGTGCTTTACCTCGACAATCAACACCGTCTGCTGACCCATGAAACCTTGTTTACC
GGCAGCATTAACAGTACCGAAGTCCATCCCCGCGAAATCGTGAAATCGGCGCTGAAGCACAACGCTGCAGCGGTTCTGCT
GGCGCACTGTCACCCGTCGGGACATGCAGACCCCAGCGATGCCGATCGAAACATCACCCGCAGGATACAGGAGGCGCTGA
TGCTGGTTGAAGTCAGGGTATTAGATCACTGTATTGTCGGCGGCATGACGGTGTATTCGTTTGCCGAACACAGCCTGCTA
TAA

Upstream 100 bases:

>100_bases
ACTACCGACTGCGGGATTACGCCCTGACTCATCCTGAGTCTAACGCCATTATGCGCATCATCGACTAACCCTTCATACTC
CCTGTGGACCCCCCATCATC

Downstream 100 bases:

>100_bases
GGAGAAACTCGATGACATCAATCAACACCCCAGCCTGGGGACTAAAACGCAACGTCACCCCACAATTTGGTGCCCGTCTC
GTGCAGCAAGGTAACCATCT

Product: DNA repair protein RadC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MMNTTLSPSVTELPLPTQRTIQRALALLEQHLRKPGESFTSPDAVRHWLCLQMAGLEREVFMVLYLDNQHRLLTHETLFT
GSINSTEVHPREIVKSALKHNAAAVLLAHCHPSGHADPSDADRNITRRIQEALMLVEVRVLDHCIVGGMTVYSFAEHSLL

Sequences:

>Translated_160_residues
MMNTTLSPSVTELPLPTQRTIQRALALLEQHLRKPGESFTSPDAVRHWLCLQMAGLEREVFMVLYLDNQHRLLTHETLFT
GSINSTEVHPREIVKSALKHNAAAVLLAHCHPSGHADPSDADRNITRRIQEALMLVEVRVLDHCIVGGMTVYSFAEHSLL
>Mature_160_residues
MMNTTLSPSVTELPLPTQRTIQRALALLEQHLRKPGESFTSPDAVRHWLCLQMAGLEREVFMVLYLDNQHRLLTHETLFT
GSINSTEVHPREIVKSALKHNAAAVLLAHCHPSGHADPSDADRNITRRIQEALMLVEVRVLDHCIVGGMTVYSFAEHSLL

Specific function: Unknown

COG id: COG2003

COG function: function code L; DNA repair proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0758 family [H]

Homologues:

Organism=Escherichia coli, GI1788997, Length=160, Percent_Identity=62.5, Blast_Score=206, Evalue=4e-55,
Organism=Escherichia coli, GI1788312, Length=146, Percent_Identity=64.3835616438356, Blast_Score=189, Evalue=1e-49,
Organism=Escherichia coli, GI2367100, Length=143, Percent_Identity=64.3356643356643, Blast_Score=188, Evalue=1e-49,
Organism=Escherichia coli, GI87082300, Length=120, Percent_Identity=50.8333333333333, Blast_Score=136, Evalue=7e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001405
- InterPro:   IPR020891 [H]

Pfam domain/function: PF04002 DUF2466 [H]

EC number: NA

Molecular weight: Translated: 17963; Mature: 17963

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNTTLSPSVTELPLPTQRTIQRALALLEQHLRKPGESFTSPDAVRHWLCLQMAGLEREV
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEE
FMVLYLDNQHRLLTHETLFTGSINSTEVHPREIVKSALKHNAAAVLLAHCHPSGHADPSD
EEEEEECCCCEEEEHHHEEECCCCCCCCCHHHHHHHHHHCCHHEEEEEECCCCCCCCCCC
ADRNITRRIQEALMLVEVRVLDHCIVGGMTVYSFAEHSLL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC
>Mature Secondary Structure
MMNTTLSPSVTELPLPTQRTIQRALALLEQHLRKPGESFTSPDAVRHWLCLQMAGLEREV
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEE
FMVLYLDNQHRLLTHETLFTGSINSTEVHPREIVKSALKHNAAAVLLAHCHPSGHADPSD
EEEEEECCCCEEEEHHHEEECCCCCCCCCHHHHHHHHHHCCHHEEEEEECCCCCCCCCCC
ADRNITRRIQEALMLVEVRVLDHCIVGGMTVYSFAEHSLL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]