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The map label for this gene is ymbA [H]

Identifier: 157369990

GI number: 157369990

Start: 1927111

End: 1927668

Strand: Direct

Name: ymbA [H]

Synonym: Spro_1747

Alternate gene names: 157369990

Gene position: 1927111-1927668 (Clockwise)

Preceding gene: 157369989

Following gene: 157369991

Centisome position: 35.37

GC content: 58.42

Gene sequence:

>558_bases
ATGATGAAATGGATCCCGGTAGCCCTGGCGCTGTTACTCAGCGCCTGTAGCAGTACTCCACAGAAGACCTACTATCAATT
GCCGGCATTGGGCTCGCCGGCACAGGTCAGCGGTAGCACGACGTCGCGCCAGCTTTGGCTGGAGCACGTTAGCGTGGCGG
ATTATCTGGCGCAGAGCGGTGTGGTTTACCAGACCAATGACGTGCAGTATGTGATTGCCCAGAACAACCTGTGGGCCAGC
CCGCTGGATCAACAGTTGCAGCAGACGCTGGTCACTAACCTGAGCAGCGCGCTGCCGGGTTGGGTGGTGTCCTCGCAGCC
GATGAGCAGCGAACAGGATGTGCTCAACGTCACCATCAGTGGTTTCCACGGCCGCTTTGACGGCAAGGCGATCATTCGCG
GCGAGTGGGTGCTGAACCATCAGGGCAATCTGACCAAACGTCCATTCAGCCTGGAGCTTAAACAGGGTGAAGACGGCTAC
GATGCCTTGGTGCGGACGTTGGCTCAGGGCTGGCAACAAGAAGCCCAGGATATTGCTGCGCAAGCCGGTCGTTTTTAG

Upstream 100 bases:

>100_bases
GTGAACTGCAGCCGGTGCTGCGCACCCTGAACGAAAAGAGCAACGCGCTGGTATTTGAAGCCGCGGGCAGTAACGATCCT
CAGCCGAAGAAGGCCAATAA

Downstream 100 bases:

>100_bases
AAATAATTTGTATTAAATCGGTCTAACCCCTTGCGGCGAGAAATATTGGGATTTCTCGTCGCAAGGGGTTTTTATTTTAT
TTCAATAAGTTAGCTTCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MMKWIPVALALLLSACSSTPQKTYYQLPALGSPAQVSGSTTSRQLWLEHVSVADYLAQSGVVYQTNDVQYVIAQNNLWAS
PLDQQLQQTLVTNLSSALPGWVVSSQPMSSEQDVLNVTISGFHGRFDGKAIIRGEWVLNHQGNLTKRPFSLELKQGEDGY
DALVRTLAQGWQQEAQDIAAQAGRF

Sequences:

>Translated_185_residues
MMKWIPVALALLLSACSSTPQKTYYQLPALGSPAQVSGSTTSRQLWLEHVSVADYLAQSGVVYQTNDVQYVIAQNNLWAS
PLDQQLQQTLVTNLSSALPGWVVSSQPMSSEQDVLNVTISGFHGRFDGKAIIRGEWVLNHQGNLTKRPFSLELKQGEDGY
DALVRTLAQGWQQEAQDIAAQAGRF
>Mature_185_residues
MMKWIPVALALLLSACSSTPQKTYYQLPALGSPAQVSGSTTSRQLWLEHVSVADYLAQSGVVYQTNDVQYVIAQNNLWAS
PLDQQLQQTLVTNLSSALPGWVVSSQPMSSEQDVLNVTISGFHGRFDGKAIIRGEWVLNHQGNLTKRPFSLELKQGEDGY
DALVRTLAQGWQQEAQDIAAQAGRF

Specific function: Unknown

COG id: COG3009

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI145693109, Length=186, Percent_Identity=59.6774193548387, Blast_Score=225, Evalue=2e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005586 [H]

Pfam domain/function: PF03886 DUF330 [H]

EC number: NA

Molecular weight: Translated: 20335; Mature: 20335

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKWIPVALALLLSACSSTPQKTYYQLPALGSPAQVSGSTTSRQLWLEHVSVADYLAQSG
CCCHHHHHHHHHHHHHCCCCCHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
VVYQTNDVQYVIAQNNLWASPLDQQLQQTLVTNLSSALPGWVVSSQPMSSEQDVLNVTIS
EEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCEEEEEEE
GFHGRFDGKAIIRGEWVLNHQGNLTKRPFSLELKQGEDGYDALVRTLAQGWQQEAQDIAA
CCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
QAGRF
HCCCC
>Mature Secondary Structure
MMKWIPVALALLLSACSSTPQKTYYQLPALGSPAQVSGSTTSRQLWLEHVSVADYLAQSG
CCCHHHHHHHHHHHHHCCCCCHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
VVYQTNDVQYVIAQNNLWASPLDQQLQQTLVTNLSSALPGWVVSSQPMSSEQDVLNVTIS
EEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCEEEEEEE
GFHGRFDGKAIIRGEWVLNHQGNLTKRPFSLELKQGEDGYDALVRTLAQGWQQEAQDIAA
CCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
QAGRF
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]