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The map label for this gene is ycjD [C]

Identifier: 157369815

GI number: 157369815

Start: 1713663

End: 1714148

Strand: Direct

Name: ycjD [C]

Synonym: Spro_1572

Alternate gene names: 157369815

Gene position: 1713663-1714148 (Clockwise)

Preceding gene: 157369808

Following gene: 157369817

Centisome position: 31.45

GC content: 50.0

Gene sequence:

>486_bases
ATGAAAAGGAAATCAACGCCCGTATCGCGTCGGTTACGAGCCAATATGAGCAATGCGGAAAAAACGGTATGGCTACGACT
AAGGGACCGCCGTTTTTATGGTTTGAAATTCCGTCGTCAGTTTCCGATTGGGCCTTATTTTGTTGATTTTGTTTGTTGGC
AACGGAAGCTGGTTATTGAATTGGACGGAGGGCAACATATGGAACAGGTCAGTTATGACACCCGTCGTAGTCATTTCCTG
GTGAGCCGCGGATTTACCGTGTTGCGTTTTTGGAATGATGAAGTGTTAAACCATTGGGAGGGAGTGGCTGAGATTATTAT
GCAGTATTTGACGGTGGATAAAGATCCCCCTCACCCCGGCCCTCTCCCCCAGGAGAGGGAGAAAGCAGAGCCGGGGGAGC
AGAATATTAGGCCAGATCATACTGAATGGCATCGCATAACGGTCCCCTCTCCCTGGGGAGAGGGTAAGGGTGAGGGGACT
CGTTAG

Upstream 100 bases:

>100_bases
CCCCAACGTTATGGCGAAATTTTTGGAAGCAAGGCGCAAGTTCGACACTGGGTTCAAGGTCAGTGCCTTGCTTGGCGTTA
TTGTGTAGACGGAGGTCTTT

Downstream 100 bases:

>100_bases
GAAGCTTACTTCACCTGCATCCCTGGCTGTGCGCCGCTGTCCGGGCTAAGCAGGAAAATTTCTTTTCCGCCCGGGCCGGC
AGCCATCACCATGCCTTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MKRKSTPVSRRLRANMSNAEKTVWLRLRDRRFYGLKFRRQFPIGPYFVDFVCWQRKLVIELDGGQHMEQVSYDTRRSHFL
VSRGFTVLRFWNDEVLNHWEGVAEIIMQYLTVDKDPPHPGPLPQEREKAEPGEQNIRPDHTEWHRITVPSPWGEGKGEGT
R

Sequences:

>Translated_161_residues
MKRKSTPVSRRLRANMSNAEKTVWLRLRDRRFYGLKFRRQFPIGPYFVDFVCWQRKLVIELDGGQHMEQVSYDTRRSHFL
VSRGFTVLRFWNDEVLNHWEGVAEIIMQYLTVDKDPPHPGPLPQEREKAEPGEQNIRPDHTEWHRITVPSPWGEGKGEGT
R
>Mature_161_residues
MKRKSTPVSRRLRANMSNAEKTVWLRLRDRRFYGLKFRRQFPIGPYFVDFVCWQRKLVIELDGGQHMEQVSYDTRRSHFL
VSRGFTVLRFWNDEVLNHWEGVAEIIMQYLTVDKDPPHPGPLPQEREKAEPGEQNIRPDHTEWHRITVPSPWGEGKGEGT
R

Specific function: Unknown

COG id: COG2852

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ycjD and H.influenzae HI_0925 [H]

Homologues:

Organism=Escherichia coli, GI1787546, Length=119, Percent_Identity=47.0588235294118, Blast_Score=109, Evalue=9e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007569
- InterPro:   IPR011335 [H]

Pfam domain/function: PF04480 DUF559 [H]

EC number: NA

Molecular weight: Translated: 19142; Mature: 19142

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKSTPVSRRLRANMSNAEKTVWLRLRDRRFYGLKFRRQFPIGPYFVDFVCWQRKLVIE
CCCCCCCHHHHHHCCCCCCCEEEEEEEECCEEECEEEEEECCCCHHHHHHHHCCCEEEEE
LDGGQHMEQVSYDTRRSHFLVSRGFTVLRFWNDEVLNHWEGVAEIIMQYLTVDKDPPHPG
ECCCCHHHHHHHHHHHHEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PLPQEREKAEPGEQNIRPDHTEWHRITVPSPWGEGKGEGTR
CCCCCHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MKRKSTPVSRRLRANMSNAEKTVWLRLRDRRFYGLKFRRQFPIGPYFVDFVCWQRKLVIE
CCCCCCCHHHHHHCCCCCCCEEEEEEEECCEEECEEEEEECCCCHHHHHHHHCCCEEEEE
LDGGQHMEQVSYDTRRSHFLVSRGFTVLRFWNDEVLNHWEGVAEIIMQYLTVDKDPPHPG
ECCCCHHHHHHHHHHHHEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PLPQEREKAEPGEQNIRPDHTEWHRITVPSPWGEGKGEGTR
CCCCCHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]