| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is gsiB [H]
Identifier: 157369794
GI number: 157369794
Start: 1690775
End: 1692313
Strand: Direct
Name: gsiB [H]
Synonym: Spro_1551
Alternate gene names: 157369794
Gene position: 1690775-1692313 (Clockwise)
Preceding gene: 157369793
Following gene: 157369795
Centisome position: 31.03
GC content: 57.31
Gene sequence:
>1539_bases ATGAAGCACACATTCAAACGTAAGGCATTGGCGGCCGTCGTGCTGTTGGCGGCAGTGGGCGCAGGCCCGGCCTGGGCGGC GAAAGATGCGGTGATCGCCGTCGCATCCAACTTCACCACGCTTGACCCCTATGATGCCAACGACACGCTGTCGCAGGCCG TGGCCAAATCTTTCTATCAGGGCCTGTTCGGTTTCGACAAGGACATGAAGCTGGTGAACGTGCTGGCGGACAGCTATGAG GTGAGTCCGGATGGCCTGACTTACACCGTCAAACTGCATCCGGGGGTGAAATTCCATGACGGTACCGAGTTTAACGCCGA AGCGGTGAAGGTGAACCTGGATCGCGCCAGCAACCCGGACAACCACCTCAAACGTTACAACCTGTTCAAAATGATCGATA AAACCGAGGTGGTAGATGCCACTACGGTGAAAATCGTGCTGAAAGCGCCATTCTCGGCGTTTATCAACAACCTGGCACAC CCGGCGGCGGTGATCATTTCCCCGGCGGCGCTAAAGCAGTACGGCAAAGAGATTGGTTTCCACCCGGTGGGCACCGGCCC TTATCAGTTTGTGACCTGGAACCAGACCGATTTCGTTAAGGTGAAGAAGTTTGACGGCTATTGGAAGCCGGGATTACCGA AGCTCGACAGCATCACCTGGCGCCCGATCGTCGATAACAATACCCGTGCGGCGATGTTGCAGACCGGCGAGGCCACTTTT GCCTTCCCGATCCCTTATGAGCAGGCCAAGGTGCTGGAAGGTAATGCCAAGCTTGATCTGGTGGCTGCGCCGTCGATTCT GCAACGCTATATCAGCCTGAATGTCACCCAGAAGCCGTTTGATAACCTGAAAGTACGCCAGGCGCTGAACTACGCCATCA ACAAAGATGCGCTGATCAAGGTAGCGTTCGCCGGCTACGCGGTACCGGCAGAAGGCCCGGTGCCGCCGGCGATTGACTTC GCCACGCGTTATAAGCCCTGGCCATACGATCCGGCCAAAGCGCGCGAACTGCTGAAGGAGGCCGGTTATCCGAACGGTTT CACTACCACTTTATGGTCGTCCCATAACCACAGCACCGCGCAGAAAGTGCTGCAGTTTGCCCAACAGCAGTTGGCGCAGG TTGGGGTGAAAGTGACGCTGACCGCGATGGATGCCGGTCAGCGTGCGGCACAGGTTGAAAGCGTTGGGGTGAAAGACACC GGTGTGCGCATGTTCTATACCGGTTGGTCCGCGTCGACCGGCGAGGCGGACTGGGCGCTGTCGCCGCTGTTCTCTACTCA GGCGGCACCTCCCAAGCAGTTCAACACCGCGTTCTACAGTAACCCGCAGGTGGACAAGGATCTGACCGGCGCGCTGGCGA CCACCGATCGCGCCGAAAAGCAGAAGTTGTACAAGGACGCGCAGGATCGTATCTGGGCTGATGCGCCATGGATCTTCCTG GCAACCGAACGCCTGCTGTCGGCCAATAACAAGCAGCTGAGCGGTTTCTATGTGATGCCGGATACTTCGTTCAACTTTGA TAACGCTGACCTTAAATAA
Upstream 100 bases:
>100_bases AACCCGTTACCGCACCGCTGGTGCAGGTTGGCCCCGGGCACTTTGTTGCCCGTCATCCGATCGCCGGTGCCTTTTAATGA CCTCAGGAGATGCAAGCACC
Downstream 100 bases:
>100_bases GGCGCCAATCCCCGCTCTCACTGAGGGCGGGGTGAGGGGATTCACCCGAGATGCTTAATTATTTTCTGAAACGGCTGCTG GGCCTGATCCCGACGCTGCT
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 512; Mature: 512
Protein sequence:
>512_residues MKHTFKRKALAAVVLLAAVGAGPAWAAKDAVIAVASNFTTLDPYDANDTLSQAVAKSFYQGLFGFDKDMKLVNVLADSYE VSPDGLTYTVKLHPGVKFHDGTEFNAEAVKVNLDRASNPDNHLKRYNLFKMIDKTEVVDATTVKIVLKAPFSAFINNLAH PAAVIISPAALKQYGKEIGFHPVGTGPYQFVTWNQTDFVKVKKFDGYWKPGLPKLDSITWRPIVDNNTRAAMLQTGEATF AFPIPYEQAKVLEGNAKLDLVAAPSILQRYISLNVTQKPFDNLKVRQALNYAINKDALIKVAFAGYAVPAEGPVPPAIDF ATRYKPWPYDPAKARELLKEAGYPNGFTTTLWSSHNHSTAQKVLQFAQQQLAQVGVKVTLTAMDAGQRAAQVESVGVKDT GVRMFYTGWSASTGEADWALSPLFSTQAAPPKQFNTAFYSNPQVDKDLTGALATTDRAEKQKLYKDAQDRIWADAPWIFL ATERLLSANNKQLSGFYVMPDTSFNFDNADLK
Sequences:
>Translated_512_residues MKHTFKRKALAAVVLLAAVGAGPAWAAKDAVIAVASNFTTLDPYDANDTLSQAVAKSFYQGLFGFDKDMKLVNVLADSYE VSPDGLTYTVKLHPGVKFHDGTEFNAEAVKVNLDRASNPDNHLKRYNLFKMIDKTEVVDATTVKIVLKAPFSAFINNLAH PAAVIISPAALKQYGKEIGFHPVGTGPYQFVTWNQTDFVKVKKFDGYWKPGLPKLDSITWRPIVDNNTRAAMLQTGEATF AFPIPYEQAKVLEGNAKLDLVAAPSILQRYISLNVTQKPFDNLKVRQALNYAINKDALIKVAFAGYAVPAEGPVPPAIDF ATRYKPWPYDPAKARELLKEAGYPNGFTTTLWSSHNHSTAQKVLQFAQQQLAQVGVKVTLTAMDAGQRAAQVESVGVKDT GVRMFYTGWSASTGEADWALSPLFSTQAAPPKQFNTAFYSNPQVDKDLTGALATTDRAEKQKLYKDAQDRIWADAPWIFL ATERLLSANNKQLSGFYVMPDTSFNFDNADLK >Mature_512_residues MKHTFKRKALAAVVLLAAVGAGPAWAAKDAVIAVASNFTTLDPYDANDTLSQAVAKSFYQGLFGFDKDMKLVNVLADSYE VSPDGLTYTVKLHPGVKFHDGTEFNAEAVKVNLDRASNPDNHLKRYNLFKMIDKTEVVDATTVKIVLKAPFSAFINNLAH PAAVIISPAALKQYGKEIGFHPVGTGPYQFVTWNQTDFVKVKKFDGYWKPGLPKLDSITWRPIVDNNTRAAMLQTGEATF AFPIPYEQAKVLEGNAKLDLVAAPSILQRYISLNVTQKPFDNLKVRQALNYAINKDALIKVAFAGYAVPAEGPVPPAIDF ATRYKPWPYDPAKARELLKEAGYPNGFTTTLWSSHNHSTAQKVLQFAQQQLAQVGVKVTLTAMDAGQRAAQVESVGVKDT GVRMFYTGWSASTGEADWALSPLFSTQAAPPKQFNTAFYSNPQVDKDLTGALATTDRAEKQKLYKDAQDRIWADAPWIFL ATERLLSANNKQLSGFYVMPDTSFNFDNADLK
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import [H]
COG id: COG0747
COG function: function code E; ABC-type dipeptide transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI1787052, Length=512, Percent_Identity=73.828125, Blast_Score=785, Evalue=0.0, Organism=Escherichia coli, GI1789966, Length=466, Percent_Identity=31.1158798283262, Blast_Score=212, Evalue=5e-56, Organism=Escherichia coli, GI1787762, Length=520, Percent_Identity=27.5, Blast_Score=142, Evalue=8e-35, Organism=Escherichia coli, GI1787551, Length=537, Percent_Identity=26.2569832402235, Blast_Score=141, Evalue=9e-35, Organism=Escherichia coli, GI1789887, Length=528, Percent_Identity=26.3257575757576, Blast_Score=131, Evalue=9e-32, Organism=Escherichia coli, GI1787495, Length=524, Percent_Identity=23.6641221374046, Blast_Score=116, Evalue=4e-27, Organism=Escherichia coli, GI1789397, Length=485, Percent_Identity=21.6494845360825, Blast_Score=83, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 56349; Mature: 56349
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHTFKRKALAAVVLLAAVGAGPAWAAKDAVIAVASNFTTLDPYDANDTLSQAVAKSFYQ CCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEECCCCCCCHHHHHHHHHHHHH GLFGFDKDMKLVNVLADSYEVSPDGLTYTVKLHPGVKFHDGTEFNAEAVKVNLDRASNPD HHHCCCCCHHHHHHHHHCCEECCCCEEEEEEECCCEEECCCCCCCCEEEEEEECCCCCCH NHLKRYNLFKMIDKTEVVDATTVKIVLKAPFSAFINNLAHPAAVIISPAALKQYGKEIGF HHHHHHHHHHHHCCHHHCCCEEEEEEEECCHHHHHHHHCCCCEEEECHHHHHHHHHHCCC HPVGTGPYQFVTWNQTDFVKVKKFDGYWKPGLPKLDSITWRPIVDNNTRAAMLQTGEATF CCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCEEE AFPIPYEQAKVLEGNAKLDLVAAPSILQRYISLNVTQKPFDNLKVRQALNYAINKDALIK EECCCCCCHHEECCCCCEEEEECHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEE VAFAGYAVPAEGPVPPAIDFATRYKPWPYDPAKARELLKEAGYPNGFTTTLWSSHNHSTA EEEECEECCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCHHHH QKVLQFAQQQLAQVGVKVTLTAMDAGQRAAQVESVGVKDTGVRMFYTGWSASTGEADWAL HHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEE SPLFSTQAAPPKQFNTAFYSNPQVDKDLTGALATTDRAEKQKLYKDAQDRIWADAPWIFL CCHHHCCCCCCHHCCCCCCCCCCCCCHHCCHHHCCCHHHHHHHHHHHHHCEECCCCEEEE ATERLLSANNKQLSGFYVMPDTSFNFDNADLK EHHHHHCCCCCCCEEEEEECCCCCCCCCCCCC >Mature Secondary Structure MKHTFKRKALAAVVLLAAVGAGPAWAAKDAVIAVASNFTTLDPYDANDTLSQAVAKSFYQ CCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEECCCCCCCHHHHHHHHHHHHH GLFGFDKDMKLVNVLADSYEVSPDGLTYTVKLHPGVKFHDGTEFNAEAVKVNLDRASNPD HHHCCCCCHHHHHHHHHCCEECCCCEEEEEEECCCEEECCCCCCCCEEEEEEECCCCCCH NHLKRYNLFKMIDKTEVVDATTVKIVLKAPFSAFINNLAHPAAVIISPAALKQYGKEIGF HHHHHHHHHHHHCCHHHCCCEEEEEEEECCHHHHHHHHCCCCEEEECHHHHHHHHHHCCC HPVGTGPYQFVTWNQTDFVKVKKFDGYWKPGLPKLDSITWRPIVDNNTRAAMLQTGEATF CCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCEEE AFPIPYEQAKVLEGNAKLDLVAAPSILQRYISLNVTQKPFDNLKVRQALNYAINKDALIK EECCCCCCHHEECCCCCEEEEECHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEE VAFAGYAVPAEGPVPPAIDFATRYKPWPYDPAKARELLKEAGYPNGFTTTLWSSHNHSTA EEEECEECCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCHHHH QKVLQFAQQQLAQVGVKVTLTAMDAGQRAAQVESVGVKDTGVRMFYTGWSASTGEADWAL HHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEE SPLFSTQAAPPKQFNTAFYSNPQVDKDLTGALATTDRAEKQKLYKDAQDRIWADAPWIFL CCHHHCCCCCCHHCCCCCCCCCCCCCHHCCHHHCCCHHHHHHHHHHHHHCEECCCCEEEE ATERLLSANNKQLSGFYVMPDTSFNFDNADLK EHHHHHCCCCCCCEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA