| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is 157369769
Identifier: 157369769
GI number: 157369769
Start: 1665171
End: 1665797
Strand: Direct
Name: 157369769
Synonym: Spro_1526
Alternate gene names: NA
Gene position: 1665171-1665797 (Clockwise)
Preceding gene: 157369765
Following gene: 157369773
Centisome position: 30.56
GC content: 56.3
Gene sequence:
>627_bases ATGATGAATGATAAGCAAAAAAATATTGCCGCCCTGCGGCGTAAACCCAGCCAGACGCGTAGCCGTGAGAAGGTGAAGCT GATCCTGGACTGCGCAACTGCGCTGATAGCCCAGCAGGGCAGTGACGCGATGCGTATGAGTGAAGTGGCGCAAAATGCCG GTATTTCGATAGGAGCGCTGTACCAGTACTTCCCGGATAAAACCGCTATCGTGCGTGTGCTGGCGCAACGTTATAACCAG GAGGCGCGTGAATGCATCGAGCAAGGCTTGATTCAGGTGCAGACATTACCGCAGTTGATCGAGGCTTTTAACTGCCTGAT TGACGAATATTACGCCTTGTTTATGGCTGAGCCGGTGATGCGGGATATCTGGGCGGCGACCCAGGCCAATAAAACGCTGC GTGAAGAAGAAGTGACGGAAAGCCGGTTGAACGGTGCATTGCTGGCAGCGACAATACGCCGGTTACGGCCGCAGTCGGAC CCGGCGGCGGTGGAAAATGCCGCTTTCCTGTTGATGCATTTGGGGGAAGCGACCATGCGACTGGCGGTGAGTACCGGCCC GGATGAGGGCCGCGATCTGGTCGCGAGCTATAAGCAAATGGCGGCCAAGATGCTGGCGGAAGCCTAG
Upstream 100 bases:
>100_bases TGCTCATAGCGTCGCTCCAAATGTGAGTGTTACTCATGTTTTGTAAATATGATAAACCCTCGTATTATTGTCAAGGCGGT TTTTGTTCAAAGGACGATGC
Downstream 100 bases:
>100_bases AGGCGCTCTTGCTCCCGTGTCTGACGCCATTCTTCTTGCAGCAGGGCATAAATCAATTCGTCGCCCCATTCGCCGTTGAA ACGATCGTTTTGCCGCAGGT
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; Transcription Regulator Protein; Transcriptional Regulator Protein TetR Family; Regulatory Protein TetR; AcrR Family Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Protein; HTH-Type Transcriptional Regulator BetI; TetR Family Regulatory Protein; Transcriptional Regulatory Protein; TetR Family Transcriptional Regulatory Protein
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MMNDKQKNIAALRRKPSQTRSREKVKLILDCATALIAQQGSDAMRMSEVAQNAGISIGALYQYFPDKTAIVRVLAQRYNQ EARECIEQGLIQVQTLPQLIEAFNCLIDEYYALFMAEPVMRDIWAATQANKTLREEEVTESRLNGALLAATIRRLRPQSD PAAVENAAFLLMHLGEATMRLAVSTGPDEGRDLVASYKQMAAKMLAEA
Sequences:
>Translated_208_residues MMNDKQKNIAALRRKPSQTRSREKVKLILDCATALIAQQGSDAMRMSEVAQNAGISIGALYQYFPDKTAIVRVLAQRYNQ EARECIEQGLIQVQTLPQLIEAFNCLIDEYYALFMAEPVMRDIWAATQANKTLREEEVTESRLNGALLAATIRRLRPQSD PAAVENAAFLLMHLGEATMRLAVSTGPDEGRDLVASYKQMAAKMLAEA >Mature_208_residues MMNDKQKNIAALRRKPSQTRSREKVKLILDCATALIAQQGSDAMRMSEVAQNAGISIGALYQYFPDKTAIVRVLAQRYNQ EARECIEQGLIQVQTLPQLIEAFNCLIDEYYALFMAEPVMRDIWAATQANKTLREEEVTESRLNGALLAATIRRLRPQSD PAAVENAAFLLMHLGEATMRLAVSTGPDEGRDLVASYKQMAAKMLAEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23164; Mature: 23164
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNDKQKNIAALRRKPSQTRSREKVKLILDCATALIAQQGSDAMRMSEVAQNAGISIGAL CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHH YQYFPDKTAIVRVLAQRYNQEARECIEQGLIQVQTLPQLIEAFNCLIDEYYALFMAEPVM HHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RDIWAATQANKTLREEEVTESRLNGALLAATIRRLRPQSDPAAVENAAFLLMHLGEATMR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH LAVSTGPDEGRDLVASYKQMAAKMLAEA HHCCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MMNDKQKNIAALRRKPSQTRSREKVKLILDCATALIAQQGSDAMRMSEVAQNAGISIGAL CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHH YQYFPDKTAIVRVLAQRYNQEARECIEQGLIQVQTLPQLIEAFNCLIDEYYALFMAEPVM HHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RDIWAATQANKTLREEEVTESRLNGALLAATIRRLRPQSDPAAVENAAFLLMHLGEATMR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH LAVSTGPDEGRDLVASYKQMAAKMLAEA HHCCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA