| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is 157369744
Identifier: 157369744
GI number: 157369744
Start: 1635048
End: 1635677
Strand: Direct
Name: 157369744
Synonym: Spro_1501
Alternate gene names: NA
Gene position: 1635048-1635677 (Clockwise)
Preceding gene: 157369743
Following gene: 157369745
Centisome position: 30.01
GC content: 49.68
Gene sequence:
>630_bases ATGACGAATATTCCTTTCAAAGAGGCTATTCTCTTTTTTGAACCCAATCCCTGGGTAAGAAAAGGATTACGGGCACTTAT TGAACCCGAGCCAACGCGCTACCAATTTGTCTACAGCATCAGAGAAATAGAGGCTGTGCTGAAGGAGAATGAGAAACAAA TCCTCATTATGGAGTTGTATAATGAACGTGAGAATTTGTATGATGTATTACGCTTCATTCTGACGATTAATGATTTCTGG CCCAAGACACCGCTGATCATATTTACTGAAGTGACTAACGCCAGCATACTGGCGATGCTGGCGGCAGAGAGGCATTTATC CCTGGTGGCAAAAGGCGATCCGCTGGATTGTCTGCTCGAAGCCGTTGCCGTTGCCGACACGGGAGTGGGGTTTCGCAGCC CGGGTATTCAGGCGGCGCTGACCCAGCCCGTGGAGCCTCTTTCACGCAGCGAATGGCTTATACTGGCGATGATGATTACC GACAGCGATCCGCGGCGCATCGCCCGTGTCACCCATCGCAGTTACAAAACGGTGAGTACCCATAAGTTGAATATCATGCG CAAACTTGGCCTTAATCAGGCAGGGTTTATGCGTCTGATTCTGGCTTTCCGCATTCAGCATCCTGCCTGA
Upstream 100 bases:
>100_bases TATCACCTTGATATTAATAACTTAAGCTTTGCCTTTTGGCTACTAATGCAGCATTTCCGCCTCAATCGCTATTTTTATAC CTAAATTACGGTAATAGATT
Downstream 100 bases:
>100_bases AAATCAACCGTCGGTCTGTCTTGTTACCAGTCAGATCGGCGGCTTAATAAAACCTCCTCAGATCGCTTATTTTTCTCGCC ACTTACCATTTCGCCAGAAT
Product: two component LuxR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator LuxR Family
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MTNIPFKEAILFFEPNPWVRKGLRALIEPEPTRYQFVYSIREIEAVLKENEKQILIMELYNERENLYDVLRFILTINDFW PKTPLIIFTEVTNASILAMLAAERHLSLVAKGDPLDCLLEAVAVADTGVGFRSPGIQAALTQPVEPLSRSEWLILAMMIT DSDPRRIARVTHRSYKTVSTHKLNIMRKLGLNQAGFMRLILAFRIQHPA
Sequences:
>Translated_209_residues MTNIPFKEAILFFEPNPWVRKGLRALIEPEPTRYQFVYSIREIEAVLKENEKQILIMELYNERENLYDVLRFILTINDFW PKTPLIIFTEVTNASILAMLAAERHLSLVAKGDPLDCLLEAVAVADTGVGFRSPGIQAALTQPVEPLSRSEWLILAMMIT DSDPRRIARVTHRSYKTVSTHKLNIMRKLGLNQAGFMRLILAFRIQHPA >Mature_208_residues TNIPFKEAILFFEPNPWVRKGLRALIEPEPTRYQFVYSIREIEAVLKENEKQILIMELYNERENLYDVLRFILTINDFWP KTPLIIFTEVTNASILAMLAAERHLSLVAKGDPLDCLLEAVAVADTGVGFRSPGIQAALTQPVEPLSRSEWLILAMMITD SDPRRIARVTHRSYKTVSTHKLNIMRKLGLNQAGFMRLILAFRIQHPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23974; Mature: 23843
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: PS50043 HTH_LUXR_2 ; PS00237 G_PROTEIN_RECEP_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNIPFKEAILFFEPNPWVRKGLRALIEPEPTRYQFVYSIREIEAVLKENEKQILIMELY CCCCCCHHEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEHH NERENLYDVLRFILTINDFWPKTPLIIFTEVTNASILAMLAAERHLSLVAKGDPLDCLLE CCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHEEEEECCCCHHHHHH AVAVADTGVGFRSPGIQAALTQPVEPLSRSEWLILAMMITDSDPRRIARVTHRSYKTVST HHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCHH HKLNIMRKLGLNQAGFMRLILAFRIQHPA HHHHHHHHHCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure TNIPFKEAILFFEPNPWVRKGLRALIEPEPTRYQFVYSIREIEAVLKENEKQILIMELY CCCCCHHEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEHH NERENLYDVLRFILTINDFWPKTPLIIFTEVTNASILAMLAAERHLSLVAKGDPLDCLLE CCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHEEEEECCCCHHHHHH AVAVADTGVGFRSPGIQAALTQPVEPLSRSEWLILAMMITDSDPRRIARVTHRSYKTVST HHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCHH HKLNIMRKLGLNQAGFMRLILAFRIQHPA HHHHHHHHHCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA