| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is dinG [H]
Identifier: 157369704
GI number: 157369704
Start: 1592292
End: 1594490
Strand: Direct
Name: dinG [H]
Synonym: Spro_1461
Alternate gene names: 157369704
Gene position: 1592292-1594490 (Clockwise)
Preceding gene: 157369703
Following gene: 157369706
Centisome position: 29.22
GC content: 56.93
Gene sequence:
>2199_bases ATGGCGCTCTCCCCCGCAGTTAAAGATCAGATTGGCCAGTGGTACAAAGCCCTGCAGCAGCAAATACCGGATTTTATTTC CCGTGCACCGCAACGGCAGATGATCGCCGAAGTGGCAAAAACGCTGGCCGGTGATTACCCGCGCCATCTGGCGATTGAGG CTCCGACCGGCGTAGGTAAAACCTTGTCATACCTGATCCCGGGGATCGCCGTCGGCCGCGCAGAGAGTAAACCTCTGGTG GTCAGCACCGCCAACGTGGCATTGCAGGATCAGATCTATAGCAAGGATTTGCCGCTGCTGAAGAAGATCATTCCCGATCT GAAATTTACCGGTGCCTTTGGCCGCGGGCGCTATGTTTGCCCGCGTAACCTGGCGGCGCTCTGCACTGATGTCAGCGAGC AGGGCGACCTGATGCTGTTTCTGGGTGACGAACTTGCGCCTTCGAGCGGTGAAGAACAGGCGCTGTGCCAGAAGCTAAGC AAGGCGCTCAGCCGCCATGAGTGGGACGGGCTGCGCGACCATTATCAACTGTCGATTGACGATCCGCTGTGGATCAAACT GAGCACCGATAAAGCCAACTGCCTGGGCCGTAACTGCCATTACATTCGTGAATGCCCGTTTTATATCGCGCGTAAAGAGA TTGAAACCGCCGACGTGGTGGTGGCTAACCATGCGTTGGTGATGGCGGCGCTGGAAACCGAGTCGGTACTGCCGAACCCG AAAGAGCTGCTGCTGGTGCTGGACGAAGGGCATCATCTGCCGGAGGTAGCGCGTGACGCGCTGGAGATTGAAGGTGAAAT CACCGCCTTATCGACCAATCTGCAGTTGGACATGATCGTGCGCCAGGTTGAGCTGTGCATGACGCAATACCGGCCGAAAA GTCCGCCGGGGTTGGCAAACGACGAACGTTTGAAGAACCACTGTGAAGAACTGCGCGAACTGATCCAAATCTTCGAGCAT CAGGTCAGCGCCTATCTGCCGACCGATACGGTCATCGCCGAACATCGATTTGAAATGGGGGAACTGCCGACGGATATGGT AGAAACCTGCGCACGATTATTCAAGCTTACCGACGCCTTGCGCGGGCTGGCGGAGTTTATCGTCAACGATCTCAGCGAAC AGACCGGCAAGCACGACATTGTGCGGCTGCATCGTTCGATCATTCAGATGAGCCGCACCCTGGGCTATCTGGAGGCGATG AGTAAACTGTGGCGGCTGGCCGCGCTGGATAAATCTTCCAACGCACCGATCTCCAAATGGGTCACGCGCGATCTGCGTGA TAACGTGACCCACCTGTACCTGCATTGTGTGGGCATTCGCGTCAGCGATCAGTTGGAAAAGCTGCTATGGCGTAAGGTGC CGCACGTGGTGATCACCTCGGCGACGCTGCGCTCGCTGAACAGCTTTGCGCGGCTGCAGGAAATGAGCGGCCTGAGTGAA AAGGCCGGCGATCGCTTTGAATCCCTGTCTTCCCCCTTCAATCATGTGGAACAGGGCAAAATTGTTATTCCGAATATGCG CTTTGAGCCGTCGATGGCCAATGAAGCCGAACATCTGGAAGAGATGGCGCGCTTTTTCCGCGCCGAGCAGGCCACTGGCA AGCACAAAGGGATGCTGATCCTGTTCAGCAGCCACCGGGCGATGCAGACCTTCCTCAGCTATGTGACCGATCTGCGCCTG ATGCTGCTGGTACAGGGCGATCAGCCACGCTATCGGCTGGTGGAAGAACACCGTAAACGGGTCGAAAAGGGCACGGCCAG CGTGTTAATCGGCCTGCAGTCGTTTGCCGAAGGGCTGGATCTAAAAGGTGAGCTGCTGACCCAGGTGCATATCCACAAAA TCGCTTTCCCGCCCATCGACAGCCCGGTGATCCTGACCGAGGGGGAATGGCTAAAATCGCTGAAGCGTTATCCGTTTGAA GTGCAGAGCCTGCCAAGCGCCTCGTTCAACCTGATCCAACAGGTGGGGCGACTGATCCGCAGTAATGAATGCCACGGCGA GATCGTGATTTACGATCGCCGCCTGCTGACCAAAAGCTACGGTTCGCGTTTGCTGGCGTCACTGCCGGTATTTCCTATCG AACAGCGGGAAGTGCCAGAGGCCGACAAGGCACACCTGGCCGCCATTAAATCTGCCGCTGCGGCGGAGAAAAAAGACAAA AAGCGCAAGAGTCCGTTCGCCCGCCGACGTACGCGTTAA
Upstream 100 bases:
>100_bases CGTTCAGTGCGGGACGCGCCTCAATGATTGAAGGCCAGGCTGACGTAGCCGACGGTCTGTGGGACAATAGCGCCATCATT TCGTAGAGATATAGAGTTGA
Downstream 100 bases:
>100_bases TCAAAGCAGCGGGGGCAGGCGGCGCTTCACCGGCGTGGTTTTGACGATGGAAGTGTTGCTCTGCGCGCGCTCGGCCAGCC GATCGAGGATCTGGTCGAGT
Product: ATP-dependent DNA helicase DinG
Products: NA
Alternate protein names: DNA-damage-inducible protein G [H]
Number of amino acids: Translated: 732; Mature: 731
Protein sequence:
>732_residues MALSPAVKDQIGQWYKALQQQIPDFISRAPQRQMIAEVAKTLAGDYPRHLAIEAPTGVGKTLSYLIPGIAVGRAESKPLV VSTANVALQDQIYSKDLPLLKKIIPDLKFTGAFGRGRYVCPRNLAALCTDVSEQGDLMLFLGDELAPSSGEEQALCQKLS KALSRHEWDGLRDHYQLSIDDPLWIKLSTDKANCLGRNCHYIRECPFYIARKEIETADVVVANHALVMAALETESVLPNP KELLLVLDEGHHLPEVARDALEIEGEITALSTNLQLDMIVRQVELCMTQYRPKSPPGLANDERLKNHCEELRELIQIFEH QVSAYLPTDTVIAEHRFEMGELPTDMVETCARLFKLTDALRGLAEFIVNDLSEQTGKHDIVRLHRSIIQMSRTLGYLEAM SKLWRLAALDKSSNAPISKWVTRDLRDNVTHLYLHCVGIRVSDQLEKLLWRKVPHVVITSATLRSLNSFARLQEMSGLSE KAGDRFESLSSPFNHVEQGKIVIPNMRFEPSMANEAEHLEEMARFFRAEQATGKHKGMLILFSSHRAMQTFLSYVTDLRL MLLVQGDQPRYRLVEEHRKRVEKGTASVLIGLQSFAEGLDLKGELLTQVHIHKIAFPPIDSPVILTEGEWLKSLKRYPFE VQSLPSASFNLIQQVGRLIRSNECHGEIVIYDRRLLTKSYGSRLLASLPVFPIEQREVPEADKAHLAAIKSAAAAEKKDK KRKSPFARRRTR
Sequences:
>Translated_732_residues MALSPAVKDQIGQWYKALQQQIPDFISRAPQRQMIAEVAKTLAGDYPRHLAIEAPTGVGKTLSYLIPGIAVGRAESKPLV VSTANVALQDQIYSKDLPLLKKIIPDLKFTGAFGRGRYVCPRNLAALCTDVSEQGDLMLFLGDELAPSSGEEQALCQKLS KALSRHEWDGLRDHYQLSIDDPLWIKLSTDKANCLGRNCHYIRECPFYIARKEIETADVVVANHALVMAALETESVLPNP KELLLVLDEGHHLPEVARDALEIEGEITALSTNLQLDMIVRQVELCMTQYRPKSPPGLANDERLKNHCEELRELIQIFEH QVSAYLPTDTVIAEHRFEMGELPTDMVETCARLFKLTDALRGLAEFIVNDLSEQTGKHDIVRLHRSIIQMSRTLGYLEAM SKLWRLAALDKSSNAPISKWVTRDLRDNVTHLYLHCVGIRVSDQLEKLLWRKVPHVVITSATLRSLNSFARLQEMSGLSE KAGDRFESLSSPFNHVEQGKIVIPNMRFEPSMANEAEHLEEMARFFRAEQATGKHKGMLILFSSHRAMQTFLSYVTDLRL MLLVQGDQPRYRLVEEHRKRVEKGTASVLIGLQSFAEGLDLKGELLTQVHIHKIAFPPIDSPVILTEGEWLKSLKRYPFE VQSLPSASFNLIQQVGRLIRSNECHGEIVIYDRRLLTKSYGSRLLASLPVFPIEQREVPEADKAHLAAIKSAAAAEKKDK KRKSPFARRRTR >Mature_731_residues ALSPAVKDQIGQWYKALQQQIPDFISRAPQRQMIAEVAKTLAGDYPRHLAIEAPTGVGKTLSYLIPGIAVGRAESKPLVV STANVALQDQIYSKDLPLLKKIIPDLKFTGAFGRGRYVCPRNLAALCTDVSEQGDLMLFLGDELAPSSGEEQALCQKLSK ALSRHEWDGLRDHYQLSIDDPLWIKLSTDKANCLGRNCHYIRECPFYIARKEIETADVVVANHALVMAALETESVLPNPK ELLLVLDEGHHLPEVARDALEIEGEITALSTNLQLDMIVRQVELCMTQYRPKSPPGLANDERLKNHCEELRELIQIFEHQ VSAYLPTDTVIAEHRFEMGELPTDMVETCARLFKLTDALRGLAEFIVNDLSEQTGKHDIVRLHRSIIQMSRTLGYLEAMS KLWRLAALDKSSNAPISKWVTRDLRDNVTHLYLHCVGIRVSDQLEKLLWRKVPHVVITSATLRSLNSFARLQEMSGLSEK AGDRFESLSSPFNHVEQGKIVIPNMRFEPSMANEAEHLEEMARFFRAEQATGKHKGMLILFSSHRAMQTFLSYVTDLRLM LLVQGDQPRYRLVEEHRKRVEKGTASVLIGLQSFAEGLDLKGELLTQVHIHKIAFPPIDSPVILTEGEWLKSLKRYPFEV QSLPSASFNLIQQVGRLIRSNECHGEIVIYDRRLLTKSYGSRLLASLPVFPIEQREVPEADKAHLAAIKSAAAAEKKDKK RKSPFARRRTR
Specific function: Probable helicase involved in DNA repair and perhaps also replication [H]
COG id: COG1199
COG function: function code KL; Rad3-related DNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1787018, Length=730, Percent_Identity=70.2739726027397, Blast_Score=1051, Evalue=0.0, Organism=Escherichia coli, GI1788110, Length=704, Percent_Identity=29.5454545454545, Blast_Score=191, Evalue=2e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR010614 - InterPro: IPR011545 - InterPro: IPR014013 - InterPro: IPR006555 - InterPro: IPR001650 [H]
Pfam domain/function: PF00270 DEAD; PF06733 DEAD_2 [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 82625; Mature: 82493
Theoretical pI: Translated: 7.81; Mature: 7.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALSPAVKDQIGQWYKALQQQIPDFISRAPQRQMIAEVAKTLAGDYPRHLAIEAPTGVGK CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHH TLSYLIPGIAVGRAESKPLVVSTANVALQDQIYSKDLPLLKKIIPDLKFTGAFGRGRYVC HHHHHHCCCEECCCCCCCEEEEECCHHHHHHHHHCCCHHHHHHCCCCEECCCCCCCCCCC PRNLAALCTDVSEQGDLMLFLGDELAPSSGEEQALCQKLSKALSRHEWDGLRDHYQLSID CCHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC DPLWIKLSTDKANCLGRNCHYIRECPFYIARKEIETADVVVANHALVMAALETESVLPNP CCEEEEEECCCHHHCCCCCHHHHHCCHHHHHHHCCHHHEEEECCCEEEEEHHHHHCCCCH KELLLVLDEGHHLPEVARDALEIEGEITALSTNLQLDMIVRQVELCMTQYRPKSPPGLAN HHEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCC DERLKNHCEELRELIQIFEHQVSAYLPTDTVIAEHRFEMGELPTDMVETCARLFKLTDAL HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH RGLAEFIVNDLSEQTGKHDIVRLHRSIIQMSRTLGYLEAMSKLWRLAALDKSSNAPISKW HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH VTRDLRDNVTHLYLHCVGIRVSDQLEKLLWRKVPHVVITSATLRSLNSFARLQEMSGLSE HHHHHHHHHHEEHHHHCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCHH KAGDRFESLSSPFNHVEQGKIVIPNMRFEPSMANEAEHLEEMARFFRAEQATGKHKGMLI HHHHHHHHHCCCHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEE LFSSHRAMQTFLSYVTDLRLMLLVQGDQPRYRLVEEHRKRVEKGTASVLIGLQSFAEGLD EECCCHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCC LKGELLTQVHIHKIAFPPIDSPVILTEGEWLKSLKRYPFEVQSLPSASFNLIQQVGRLIR CCHHHHHHHHHHHEECCCCCCCEEEECCHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHH SNECHGEIVIYDRRLLTKSYGSRLLASLPVFPIEQREVPEADKAHLAAIKSAAAAEKKDK CCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH KRKSPFARRRTR HHCCCHHHCCCC >Mature Secondary Structure ALSPAVKDQIGQWYKALQQQIPDFISRAPQRQMIAEVAKTLAGDYPRHLAIEAPTGVGK CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHH TLSYLIPGIAVGRAESKPLVVSTANVALQDQIYSKDLPLLKKIIPDLKFTGAFGRGRYVC HHHHHHCCCEECCCCCCCEEEEECCHHHHHHHHHCCCHHHHHHCCCCEECCCCCCCCCCC PRNLAALCTDVSEQGDLMLFLGDELAPSSGEEQALCQKLSKALSRHEWDGLRDHYQLSID CCHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC DPLWIKLSTDKANCLGRNCHYIRECPFYIARKEIETADVVVANHALVMAALETESVLPNP CCEEEEEECCCHHHCCCCCHHHHHCCHHHHHHHCCHHHEEEECCCEEEEEHHHHHCCCCH KELLLVLDEGHHLPEVARDALEIEGEITALSTNLQLDMIVRQVELCMTQYRPKSPPGLAN HHEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCC DERLKNHCEELRELIQIFEHQVSAYLPTDTVIAEHRFEMGELPTDMVETCARLFKLTDAL HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH RGLAEFIVNDLSEQTGKHDIVRLHRSIIQMSRTLGYLEAMSKLWRLAALDKSSNAPISKW HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH VTRDLRDNVTHLYLHCVGIRVSDQLEKLLWRKVPHVVITSATLRSLNSFARLQEMSGLSE HHHHHHHHHHEEHHHHCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCHH KAGDRFESLSSPFNHVEQGKIVIPNMRFEPSMANEAEHLEEMARFFRAEQATGKHKGMLI HHHHHHHHHCCCHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEE LFSSHRAMQTFLSYVTDLRLMLLVQGDQPRYRLVEEHRKRVEKGTASVLIGLQSFAEGLD EECCCHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCC LKGELLTQVHIHKIAFPPIDSPVILTEGEWLKSLKRYPFEVQSLPSASFNLIQQVGRLIR CCHHHHHHHHHHHEECCCCCCCEEEECCHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHH SNECHGEIVIYDRRLLTKSYGSRLLASLPVFPIEQREVPEADKAHLAAIKSAAAAEKKDK CCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH KRKSPFARRRTR HHCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]