| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is bioA [H]
Identifier: 157369553
GI number: 157369553
Start: 1438698
End: 1439990
Strand: Reverse
Name: bioA [H]
Synonym: Spro_1310
Alternate gene names: 157369553
Gene position: 1439990-1438698 (Counterclockwise)
Preceding gene: 157369558
Following gene: 157369551
Centisome position: 26.43
GC content: 60.48
Gene sequence:
>1293_bases ATGATTTGGTTTACAAGCATGTCTATCACTGCCTCTGACCTTGAGTTCGACCAACGCCATATCTGGCACCCGTACACTTC CATGAGCCACCCGCTGCCCTGTTATCCGGTAGAAGCCGCCAGCGGCGTTGAGCTGCAGCTGGCCGACGGTCGGCGACTGA TTGACGGCATGTCCTCCTGGTGGGCGGCAATTCACGGATACAACCACCCGCAGCTGAACCAGGCCGCCACGCAACAGTTG GAAAAAATGTCGCACGTGATGTTCGGCGGCATTACCCATCCTGCGGCCATTGCCCTGTGCCGCCGTCTGGTGGCAATGAC ACCGGAGGCGCTGCAATGCGTATTCCTGGCGGATTCCGGCTCGGTGGCGGTAGAGGTGTCGCTGAAGATGGCGCTGCAAT ACTGGCAGGCTCGCGGGGAAAGGCGACAACGCATTCTGACCCTGCGGCACGGCTATCACGGCGATACCTTTGGCGCGATG TCGGTGTGCGATCCGGACAATTCGATGCACAGCCTTTATCAGGGTTATCTGGCGCCGCACCTGTTCGCTACCGCGCCGCA GTGCGGTTTCGACCAGGTCTGGGATGAAAATGATATTGCGCCGTTCGCCGCGCTGCTGGAGCAGCATGCCGGAGAAGTGG CTGCGGTGATCCTGGAGCCGGTAGTCCAGGGCGCAGGCGGCATGCGCATCTACCACCCGACCTATCTCAAGCGGGTGCGT GAGCTGTGCGATCGTCATCAGGTGCTGCTGATCGCCGACGAGATCGCCACCGGTTTCGGTCGCACTGGCAAGCTGTTTGC CTGTGAACATGCCGACGTGGTGCCGGATATTCTGTGTCTGGGCAAGGCGCTGACCGGTGGCTATATGACGCTATCCGCCA CCCTGACCACGCGCCACGTGGCGGAAACCATCAGCAACGGGGCCGCCGGCTGCTTTATGCACGGACCAACCTTTATGGGC AACCCGCTGGCCTGTGCGGTGGCCAACGCCAGCCTGTCGCTGTTGGCGGAAAACCACTGGCAGCAGCAGGTCGCCGCTAT CGAAAGCCAACTGAAACAGCAGTTATTACCGCTGAAGGCGCTGCCAAAAGTGGCGGATGTGAGAGTGCTGGGGGCGATTG GCGTAGTAGAAATGCGCGAGTCGGTGGATGTGGCGCAGCTACAGCGTGGCTTTGTCGAGCGCGGCGTGTGGATCCGGCCC TTCGGCAAACTGATTTATTTGATGCCGCCGTATATTATTGAACCTGAACAGCTCAGCCGTTTGACCGCCGCCGTAGCGGC CGCAGTAGAGTAA
Upstream 100 bases:
>100_bases CCCACTGTCCAGTGAATGCGATCGGCCATCACGGCGTCTCCAAAATGAAAAAAGTGTCGTCAGTTTAGATATTGTGGATA TACTGTCAACCATTACGAAT
Downstream 100 bases:
>100_bases TTGCTTACCAATGCTGGTCCAGATAACGGGCCAGCCACACCAGGCACCCCACCCACAGCAAAATGATCATCACCGCCGCC ATCCGGCCGGTTGGATTATC
Product: adenosylmethionine--8-amino-7-oxononanoate transaminase
Products: NA
Alternate protein names: 7,8-diamino-pelargonic acid aminotransferase; DAPA AT; DAPA aminotransferase; Diaminopelargonic acid synthase [H]
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MIWFTSMSITASDLEFDQRHIWHPYTSMSHPLPCYPVEAASGVELQLADGRRLIDGMSSWWAAIHGYNHPQLNQAATQQL EKMSHVMFGGITHPAAIALCRRLVAMTPEALQCVFLADSGSVAVEVSLKMALQYWQARGERRQRILTLRHGYHGDTFGAM SVCDPDNSMHSLYQGYLAPHLFATAPQCGFDQVWDENDIAPFAALLEQHAGEVAAVILEPVVQGAGGMRIYHPTYLKRVR ELCDRHQVLLIADEIATGFGRTGKLFACEHADVVPDILCLGKALTGGYMTLSATLTTRHVAETISNGAAGCFMHGPTFMG NPLACAVANASLSLLAENHWQQQVAAIESQLKQQLLPLKALPKVADVRVLGAIGVVEMRESVDVAQLQRGFVERGVWIRP FGKLIYLMPPYIIEPEQLSRLTAAVAAAVE
Sequences:
>Translated_430_residues MIWFTSMSITASDLEFDQRHIWHPYTSMSHPLPCYPVEAASGVELQLADGRRLIDGMSSWWAAIHGYNHPQLNQAATQQL EKMSHVMFGGITHPAAIALCRRLVAMTPEALQCVFLADSGSVAVEVSLKMALQYWQARGERRQRILTLRHGYHGDTFGAM SVCDPDNSMHSLYQGYLAPHLFATAPQCGFDQVWDENDIAPFAALLEQHAGEVAAVILEPVVQGAGGMRIYHPTYLKRVR ELCDRHQVLLIADEIATGFGRTGKLFACEHADVVPDILCLGKALTGGYMTLSATLTTRHVAETISNGAAGCFMHGPTFMG NPLACAVANASLSLLAENHWQQQVAAIESQLKQQLLPLKALPKVADVRVLGAIGVVEMRESVDVAQLQRGFVERGVWIRP FGKLIYLMPPYIIEPEQLSRLTAAVAAAVE >Mature_430_residues MIWFTSMSITASDLEFDQRHIWHPYTSMSHPLPCYPVEAASGVELQLADGRRLIDGMSSWWAAIHGYNHPQLNQAATQQL EKMSHVMFGGITHPAAIALCRRLVAMTPEALQCVFLADSGSVAVEVSLKMALQYWQARGERRQRILTLRHGYHGDTFGAM SVCDPDNSMHSLYQGYLAPHLFATAPQCGFDQVWDENDIAPFAALLEQHAGEVAAVILEPVVQGAGGMRIYHPTYLKRVR ELCDRHQVLLIADEIATGFGRTGKLFACEHADVVPDILCLGKALTGGYMTLSATLTTRHVAETISNGAAGCFMHGPTFMG NPLACAVANASLSLLAENHWQQQVAAIESQLKQQLLPLKALPKVADVRVLGAIGVVEMRESVDVAQLQRGFVERGVWIRP FGKLIYLMPPYIIEPEQLSRLTAAVAAAVE
Specific function: Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor [H]
COG id: COG0161
COG function: function code H; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily [H]
Homologues:
Organism=Homo sapiens, GI4557809, Length=423, Percent_Identity=30.4964539007092, Blast_Score=154, Evalue=1e-37, Organism=Homo sapiens, GI284507298, Length=308, Percent_Identity=33.1168831168831, Blast_Score=132, Evalue=9e-31, Organism=Homo sapiens, GI13994255, Length=374, Percent_Identity=28.6096256684492, Blast_Score=122, Evalue=6e-28, Organism=Homo sapiens, GI226442709, Length=322, Percent_Identity=27.3291925465839, Blast_Score=102, Evalue=5e-22, Organism=Homo sapiens, GI37574042, Length=322, Percent_Identity=27.3291925465839, Blast_Score=102, Evalue=5e-22, Organism=Homo sapiens, GI226442705, Length=314, Percent_Identity=27.0700636942675, Blast_Score=97, Evalue=3e-20, Organism=Homo sapiens, GI24119277, Length=365, Percent_Identity=27.3972602739726, Blast_Score=86, Evalue=6e-17, Organism=Escherichia coli, GI1786991, Length=422, Percent_Identity=74.4075829383886, Blast_Score=644, Evalue=0.0, Organism=Escherichia coli, GI145693181, Length=296, Percent_Identity=37.8378378378378, Blast_Score=169, Evalue=4e-43, Organism=Escherichia coli, GI1789016, Length=387, Percent_Identity=29.1989664082687, Blast_Score=152, Evalue=4e-38, Organism=Escherichia coli, GI1789759, Length=391, Percent_Identity=30.9462915601023, Blast_Score=138, Evalue=8e-34, Organism=Escherichia coli, GI1788044, Length=306, Percent_Identity=34.3137254901961, Blast_Score=137, Evalue=2e-33, Organism=Escherichia coli, GI1787560, Length=433, Percent_Identity=27.0207852193995, Blast_Score=132, Evalue=4e-32, Organism=Escherichia coli, GI1786349, Length=390, Percent_Identity=27.9487179487179, Blast_Score=111, Evalue=1e-25, Organism=Caenorhabditis elegans, GI25144271, Length=430, Percent_Identity=28.8372093023256, Blast_Score=142, Evalue=4e-34, Organism=Caenorhabditis elegans, GI25144274, Length=221, Percent_Identity=37.10407239819, Blast_Score=129, Evalue=4e-30, Organism=Caenorhabditis elegans, GI32564660, Length=360, Percent_Identity=28.8888888888889, Blast_Score=115, Evalue=3e-26, Organism=Caenorhabditis elegans, GI71992977, Length=341, Percent_Identity=25.5131964809384, Blast_Score=80, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6324386, Length=451, Percent_Identity=48.3370288248337, Blast_Score=436, Evalue=1e-123, Organism=Saccharomyces cerevisiae, GI6323470, Length=435, Percent_Identity=29.6551724137931, Blast_Score=155, Evalue=9e-39, Organism=Saccharomyces cerevisiae, GI6324432, Length=393, Percent_Identity=28.498727735369, Blast_Score=126, Evalue=7e-30, Organism=Saccharomyces cerevisiae, GI6321456, Length=321, Percent_Identity=23.98753894081, Blast_Score=76, Evalue=9e-15, Organism=Drosophila melanogaster, GI21357415, Length=398, Percent_Identity=30.4020100502513, Blast_Score=149, Evalue=3e-36, Organism=Drosophila melanogaster, GI28574759, Length=364, Percent_Identity=30.4945054945055, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI161085790, Length=364, Percent_Identity=30.4945054945055, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI21356575, Length=347, Percent_Identity=26.5129682997118, Blast_Score=106, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005814 - InterPro: IPR005815 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00202 Aminotran_3 [H]
EC number: =2.6.1.62 [H]
Molecular weight: Translated: 47179; Mature: 47179
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: PS00600 AA_TRANSFER_CLASS_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIWFTSMSITASDLEFDQRHIWHPYTSMSHPLPCYPVEAASGVELQLADGRRLIDGMSSW CEEEEEECEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHH WAAIHGYNHPQLNQAATQQLEKMSHVMFGGITHPAAIALCRRLVAMTPEALQCVFLADSG HHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCC SVAVEVSLKMALQYWQARGERRQRILTLRHGYHGDTFGAMSVCDPDNSMHSLYQGYLAPH CEEEEHHHHHHHHHHHHHHHHHHHEEHHCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHH LFATAPQCGFDQVWDENDIAPFAALLEQHAGEVAAVILEPVVQGAGGMRIYHPTYLKRVR HHHCCCCCCCHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEECHHHHHHHH ELCDRHQVLLIADEIATGFGRTGKLFACEHADVVPDILCLGKALTGGYMTLSATLTTRHV HHHCCCCEEEEEHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHCCCEEEEEEHHHHHHH AETISNGAAGCFMHGPTFMGNPLACAVANASLSLLAENHWQQQVAAIESQLKQQLLPLKA HHHHCCCCCEEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LPKVADVRVLGAIGVVEMRESVDVAQLQRGFVERGVWIRPFGKLIYLMPPYIIEPEQLSR CCCHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEECCCCEEEECCCCEECHHHHHH LTAAVAAAVE HHHHHHHHCC >Mature Secondary Structure MIWFTSMSITASDLEFDQRHIWHPYTSMSHPLPCYPVEAASGVELQLADGRRLIDGMSSW CEEEEEECEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHH WAAIHGYNHPQLNQAATQQLEKMSHVMFGGITHPAAIALCRRLVAMTPEALQCVFLADSG HHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCC SVAVEVSLKMALQYWQARGERRQRILTLRHGYHGDTFGAMSVCDPDNSMHSLYQGYLAPH CEEEEHHHHHHHHHHHHHHHHHHHEEHHCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHH LFATAPQCGFDQVWDENDIAPFAALLEQHAGEVAAVILEPVVQGAGGMRIYHPTYLKRVR HHHCCCCCCCHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEECHHHHHHHH ELCDRHQVLLIADEIATGFGRTGKLFACEHADVVPDILCLGKALTGGYMTLSATLTTRHV HHHCCCCEEEEEHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHCCCEEEEEEHHHHHHH AETISNGAAGCFMHGPTFMGNPLACAVANASLSLLAENHWQQQVAAIESQLKQQLLPLKA HHHHCCCCCEEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LPKVADVRVLGAIGVVEMRESVDVAQLQRGFVERGVWIRPFGKLIYLMPPYIIEPEQLSR CCCHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEECCCCEEEECCCCEECHHHHHH LTAAVAAAVE HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8250549 [H]