| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is ybhB [H]
Identifier: 157369551
GI number: 157369551
Start: 1437643
End: 1438125
Strand: Reverse
Name: ybhB [H]
Synonym: Spro_1308
Alternate gene names: 157369551
Gene position: 1438125-1437643 (Counterclockwise)
Preceding gene: 157369553
Following gene: 157369549
Centisome position: 26.39
GC content: 60.04
Gene sequence:
>483_bases ATGACTTTTCGTTTGTACAGCAATGAGTTGCAGGACGGCGCAAAAATGCCGGAGCGTCAGGTGTTTAACGGCATGGGTTA TCACGGCGATAATCTGTCACCGCATCTGGCCTGGGATGGCGTGCCGGAAGGCACCAAGAGCTTCGTGATTTCAGTTTACG ATCCCGATGCCCCGACCGGCTCCGGCTGGTGGCACTGGGTGGTCGCCAATATCCCGGCGGCAACGCGTGAACTTCCGCCG GGCGCAGGCTCCGGCAAAGGTGGCTTACCGGCTGGGGCTATCCAGACTCGCACCGACTTTGGTTCCGCCGGTTACGGCGG CGCGGCGCCACCGCAGGGTGAAAGCCACCGCTATCACTTCACCGTACATGCGCTGGACGTAGCAAGCATTGAGGTGGATG AAGGCTCCAGTGGCGCACTGGTTGGTTTTAACGTGCACTTCCATAGCCTCGGCAGCGCTACGCTGACGGTGAAGTACAGC TGA
Upstream 100 bases:
>100_bases CCCATAGATAAGGCTACTGGCGAGATACAATGCTGCTTGTATTGTTGCGGCAAAACGGTCTAGCTTAGGGTTCTGCTTTT ACCGACAACAGGGAGTCAGC
Downstream 100 bases:
>100_bases TTTTTTGGCAAACTAAGGGGCGAATGTATTCGCCCCTTAGTTTTATTTAGCCAGGATGCTTACCCACATCGGGCCTTTAC CCACCGGGTACCTTGCCAGC
Product: putative kinase inhibitor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MTFRLYSNELQDGAKMPERQVFNGMGYHGDNLSPHLAWDGVPEGTKSFVISVYDPDAPTGSGWWHWVVANIPAATRELPP GAGSGKGGLPAGAIQTRTDFGSAGYGGAAPPQGESHRYHFTVHALDVASIEVDEGSSGALVGFNVHFHSLGSATLTVKYS
Sequences:
>Translated_160_residues MTFRLYSNELQDGAKMPERQVFNGMGYHGDNLSPHLAWDGVPEGTKSFVISVYDPDAPTGSGWWHWVVANIPAATRELPP GAGSGKGGLPAGAIQTRTDFGSAGYGGAAPPQGESHRYHFTVHALDVASIEVDEGSSGALVGFNVHFHSLGSATLTVKYS >Mature_159_residues TFRLYSNELQDGAKMPERQVFNGMGYHGDNLSPHLAWDGVPEGTKSFVISVYDPDAPTGSGWWHWVVANIPAATRELPPG AGSGKGGLPAGAIQTRTDFGSAGYGGAAPPQGESHRYHFTVHALDVASIEVDEGSSGALVGFNVHFHSLGSATLTVKYS
Specific function: Unknown
COG id: COG1881
COG function: function code R; Phospholipid-binding protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0098 family [H]
Homologues:
Organism=Escherichia coli, GI1786990, Length=158, Percent_Identity=70.253164556962, Blast_Score=243, Evalue=6e-66, Organism=Escherichia coli, GI1786757, Length=159, Percent_Identity=53.4591194968553, Blast_Score=171, Evalue=2e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008914 - InterPro: IPR005247 [H]
Pfam domain/function: PF01161 PBP [H]
EC number: NA
Molecular weight: Translated: 16885; Mature: 16754
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFRLYSNELQDGAKMPERQVFNGMGYHGDNLSPHLAWDGVPEGTKSFVISVYDPDAPTG CEEEEECCCHHHCCCCCHHHHHCCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCC SGWWHWVVANIPAATRELPPGAGSGKGGLPAGAIQTRTDFGSAGYGGAAPPQGESHRYHF CCEEEEEEEECCCHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEE TVHALDVASIEVDEGSSGALVGFNVHFHSLGSATLTVKYS EEEEEEEEEEEECCCCCCCEEEEEEEEEECCCEEEEEEEC >Mature Secondary Structure TFRLYSNELQDGAKMPERQVFNGMGYHGDNLSPHLAWDGVPEGTKSFVISVYDPDAPTG EEEEECCCHHHCCCCCHHHHHCCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCC SGWWHWVVANIPAATRELPPGAGSGKGGLPAGAIQTRTDFGSAGYGGAAPPQGESHRYHF CCEEEEEEEECCCHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEE TVHALDVASIEVDEGSSGALVGFNVHFHSLGSATLTVKYS EEEEEEEEEEEECCCCCCCEEEEEEEEEECCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3058702; 9278503; 11439028 [H]