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The map label for this gene is yvrB [H]

Identifier: 157369543

GI number: 157369543

Start: 1430626

End: 1431672

Strand: Direct

Name: yvrB [H]

Synonym: Spro_1300

Alternate gene names: 157369543

Gene position: 1430626-1431672 (Clockwise)

Preceding gene: 157369542

Following gene: 157369544

Centisome position: 26.26

GC content: 62.46

Gene sequence:

>1047_bases
ATGGACGGGTCTGTACGCCGCCATTTTACCTTGCTGCCGGGGCGCTCCGGGGGCTGGCTGTTATTGCTGCTCCTGGCGTT
GCCGCTGTTTTTGCTGGGTGCTTCGCTGTACGGACCGGCACCAATATCGCTGCATGACGCGTGGCATATTTTATCTGACC
CCGGTGGCGCTAATGCCCAGGACAACACCGAGGTTTATCAACGAATCATTTGGTCACTGAGAATGCCGAGAGCCTTACTG
GCGGCGGTGGCGGGTGCCGGGCTGGCACTGGCCGGCACTATTCTGCAGTCACTGACGCGTAACCCGTTGGCCGATCCCTG
GGTGCTGGGGATTTCCTCTGGGGCTGGGGTGGGGGCGGTGTTGGTTCTGGTGTTGGGACTGGGTGGTGGCCTGCTGTCGG
TACCCGGTGGGGCGTTTCTCGGGGCGGCCGGGGCATTTGCGCTGGTTTTGCTGCTTGCCGGGCGTTCCCTGCAGGCGGAA
TCAACGCTGTTTATTCTGGCCGGGGTGGCTGTCACGCAGTTGCTTTCAGCCCTGACCTCGCTGATTACCCTGTGGCAGGC
GGATGCCAATGCCACCCGCGGCGTGATGTTCTGGCTGTTGGGATCCTTCAGTGACGCTCGCTGGCCGCAGGTAGGTTTGG
TTGCGCTGCTGCTGGCGCTGGCGTTGCTGGTTTGCTGGATGAGAGCGGGGGAACTGGATGCCCTGGCCTTCGGCGGCCTG
ACGGCAGCCTCTTTGGGGGTGGCGGTGGCACCGCTGAAGCTGTTGTTGTATGCCATCACTATGGCGCTGACTGCCGTTAT
TGTCGCGTTCAGCGGCGCGGTGGGGTTTATCGGCCTGACGGTGCCGCATGTCGCCAGGCTGTTGGTTGGGCCACGCCATC
GGGTACTGCTGCCGGCCAGCGCATTGTGCGGCGCACTGTTTGCCGTAGCGGCAGATACCCTGGCCAGAACCCTGTTCGCG
CCGCGTGAGCTGCCGGTGGGGGTATTGACGGCATTGTTGGGCGTACCGGTTTTTCTGGCATTGCTGTATCGGAAAATAAA
CGCATGA

Upstream 100 bases:

>100_bases
CTGGACTTTCAGGTTGCCAGCTTGATACAGGCGGGTTTCACCGAGGCGGGGCCAGTCTGGCAGTTGCTGGATGACTACGT
GATTGCAGGCTGGAAATAGC

Downstream 100 bases:

>100_bases
CGGCTGAAAAGGGTTTACCGGGGCTGCGTGCCGAACGGTTGGGCTGGTCTACACCGGAGAAAAGGATATTGGATAACCTT
AGCTTCCATGCCCGTCCCGG

Product: transport system permease

Products: ADP; phosphate; cob(I)alamin [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MDGSVRRHFTLLPGRSGGWLLLLLLALPLFLLGASLYGPAPISLHDAWHILSDPGGANAQDNTEVYQRIIWSLRMPRALL
AAVAGAGLALAGTILQSLTRNPLADPWVLGISSGAGVGAVLVLVLGLGGGLLSVPGGAFLGAAGAFALVLLLAGRSLQAE
STLFILAGVAVTQLLSALTSLITLWQADANATRGVMFWLLGSFSDARWPQVGLVALLLALALLVCWMRAGELDALAFGGL
TAASLGVAVAPLKLLLYAITMALTAVIVAFSGAVGFIGLTVPHVARLLVGPRHRVLLPASALCGALFAVAADTLARTLFA
PRELPVGVLTALLGVPVFLALLYRKINA

Sequences:

>Translated_348_residues
MDGSVRRHFTLLPGRSGGWLLLLLLALPLFLLGASLYGPAPISLHDAWHILSDPGGANAQDNTEVYQRIIWSLRMPRALL
AAVAGAGLALAGTILQSLTRNPLADPWVLGISSGAGVGAVLVLVLGLGGGLLSVPGGAFLGAAGAFALVLLLAGRSLQAE
STLFILAGVAVTQLLSALTSLITLWQADANATRGVMFWLLGSFSDARWPQVGLVALLLALALLVCWMRAGELDALAFGGL
TAASLGVAVAPLKLLLYAITMALTAVIVAFSGAVGFIGLTVPHVARLLVGPRHRVLLPASALCGALFAVAADTLARTLFA
PRELPVGVLTALLGVPVFLALLYRKINA
>Mature_348_residues
MDGSVRRHFTLLPGRSGGWLLLLLLALPLFLLGASLYGPAPISLHDAWHILSDPGGANAQDNTEVYQRIIWSLRMPRALL
AAVAGAGLALAGTILQSLTRNPLADPWVLGISSGAGVGAVLVLVLGLGGGLLSVPGGAFLGAAGAFALVLLLAGRSLQAE
STLFILAGVAVTQLLSALTSLITLWQADANATRGVMFWLLGSFSDARWPQVGLVALLLALALLVCWMRAGELDALAFGGL
TAASLGVAVAPLKLLLYAITMALTAVIVAFSGAVGFIGLTVPHVARLLVGPRHRVLLPASALCGALFAVAADTLARTLFA
PRELPVGVLTALLGVPVFLALLYRKINA

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788004, Length=280, Percent_Identity=38.9285714285714, Blast_Score=138, Evalue=5e-34,
Organism=Escherichia coli, GI1790740, Length=291, Percent_Identity=38.4879725085911, Blast_Score=136, Evalue=2e-33,
Organism=Escherichia coli, GI1790741, Length=325, Percent_Identity=37.5384615384615, Blast_Score=135, Evalue=4e-33,
Organism=Escherichia coli, GI1786347, Length=281, Percent_Identity=35.5871886120996, Blast_Score=118, Evalue=7e-28,
Organism=Escherichia coli, GI1786805, Length=284, Percent_Identity=38.0281690140845, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1786804, Length=290, Percent_Identity=35.5172413793103, Blast_Score=94, Evalue=9e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 35798; Mature: 35798

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: PS00012 PHOSPHOPANTETHEINE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGSVRRHFTLLPGRSGGWLLLLLLALPLFLLGASLYGPAPISLHDAWHILSDPGGANAQ
CCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCC
DNTEVYQRIIWSLRMPRALLAAVAGAGLALAGTILQSLTRNPLADPWVLGISSGAGVGAV
CCHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHH
LVLVLGLGGGLLSVPGGAFLGAAGAFALVLLLAGRSLQAESTLFILAGVAVTQLLSALTS
HHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
LITLWQADANATRGVMFWLLGSFSDARWPQVGLVALLLALALLVCWMRAGELDALAFGGL
HHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCH
TAASLGVAVAPLKLLLYAITMALTAVIVAFSGAVGFIGLTVPHVARLLVGPRHRVLLPAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCEEECHH
ALCGALFAVAADTLARTLFAPRELPVGVLTALLGVPVFLALLYRKINA
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDGSVRRHFTLLPGRSGGWLLLLLLALPLFLLGASLYGPAPISLHDAWHILSDPGGANAQ
CCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCC
DNTEVYQRIIWSLRMPRALLAAVAGAGLALAGTILQSLTRNPLADPWVLGISSGAGVGAV
CCHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHH
LVLVLGLGGGLLSVPGGAFLGAAGAFALVLLLAGRSLQAESTLFILAGVAVTQLLSALTS
HHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
LITLWQADANATRGVMFWLLGSFSDARWPQVGLVALLLALALLVCWMRAGELDALAFGGL
HHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCH
TAASLGVAVAPLKLLLYAITMALTAVIVAFSGAVGFIGLTVPHVARLLVGPRHRVLLPAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCEEECHH
ALCGALFAVAADTLARTLFAPRELPVGVLTALLGVPVFLALLYRKINA
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; cob(I)alamin [Periplasm]; H2O [C]

Specific reaction: ATP + cob(I)alamin [Periplasm] + H2O = ADP + phosphate + cob(I)alamin [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]