| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yuxK [H]
Identifier: 157369246
GI number: 157369246
Start: 1105525
End: 1105968
Strand: Direct
Name: yuxK [H]
Synonym: Spro_1003
Alternate gene names: 157369246
Gene position: 1105525-1105968 (Clockwise)
Preceding gene: 157369245
Following gene: 157369247
Centisome position: 20.29
GC content: 59.91
Gene sequence:
>444_bases ATGAATCGGCCAGGACTCCCCCCTTATCTGCAACCCGGTGATCGGGTGCTGTTATTCGATGGCGAATGTAATCTGTGCCA CGGGCTGGTGCGATTTTTGATCCGTGCCGATCGGCAAGGCAAGATCCTGCTGGCCACGGTGCAATCCGAGGAGGGGCAGG CCATTCTGCGCTGGCTGGTGTTACCTACCGATCGTTTTGACTCCATTGTTTACCTGGCACAGGGCCAGCATTGGCTGCGC TCGGCGGCGTTCTTTCAGGCACTGCGGCAGCTTGGCTGGCCATTTCGCCTGCTGGCGTTGGCTCGCTTTCTGCCGCAACG GCTGGCGGATGCGTTATACAATGCGGTGGCGCGTAACCGCTATCGGCTGTTTGGTCGCAACGACGGCAGCGCCTTGCCTG GGCTTGAGCTGCCGGAGCGCTATCTGCATCGTCGTGGTGAATAA
Upstream 100 bases:
>100_bases ATTACCGGATAACCCTTCGGCCCCGCCTGCGCCTTAAACGGGCCTGCTGGCACTGAGGGGGAATGCGCGTTAGTCTGGTG GCAACCCCTCAGGAGGCAGG
Downstream 100 bases:
>100_bases ACCCGCTGAGCTTTACGCTTCTTTACCCTTTAATCGATTGAAATATCAGCGTTCCGGCCCCATATAATGGAACGTTCAGC CAATCGGGAGAGAGTATGGG
Product: putative thiol-disulfide oxidoreductase DCC
Products: NA
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MNRPGLPPYLQPGDRVLLFDGECNLCHGLVRFLIRADRQGKILLATVQSEEGQAILRWLVLPTDRFDSIVYLAQGQHWLR SAAFFQALRQLGWPFRLLALARFLPQRLADALYNAVARNRYRLFGRNDGSALPGLELPERYLHRRGE
Sequences:
>Translated_147_residues MNRPGLPPYLQPGDRVLLFDGECNLCHGLVRFLIRADRQGKILLATVQSEEGQAILRWLVLPTDRFDSIVYLAQGQHWLR SAAFFQALRQLGWPFRLLALARFLPQRLADALYNAVARNRYRLFGRNDGSALPGLELPERYLHRRGE >Mature_147_residues MNRPGLPPYLQPGDRVLLFDGECNLCHGLVRFLIRADRQGKILLATVQSEEGQAILRWLVLPTDRFDSIVYLAQGQHWLR SAAFFQALRQLGWPFRLLALARFLPQRLADALYNAVARNRYRLFGRNDGSALPGLELPERYLHRRGE
Specific function: Unknown
COG id: COG3011
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DCC thiol-disulfide oxidoreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007263 [H]
Pfam domain/function: PF04134 DUF393 [H]
EC number: NA
Molecular weight: Translated: 16926; Mature: 16926
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRPGLPPYLQPGDRVLLFDGECNLCHGLVRFLIRADRQGKILLATVQSEEGQAILRWLV CCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHH LPTDRFDSIVYLAQGQHWLRSAAFFQALRQLGWPFRLLALARFLPQRLADALYNAVARNR CCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC YRLFGRNDGSALPGLELPERYLHRRGE CEEEECCCCCCCCCCCCCHHHHHCCCC >Mature Secondary Structure MNRPGLPPYLQPGDRVLLFDGECNLCHGLVRFLIRADRQGKILLATVQSEEGQAILRWLV CCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHH LPTDRFDSIVYLAQGQHWLRSAAFFQALRQLGWPFRLLALARFLPQRLADALYNAVARNR CCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC YRLFGRNDGSALPGLELPERYLHRRGE CEEEECCCCCCCCCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7961491; 9274030; 9384377 [H]