| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yjjA [H]
Identifier: 157369237
GI number: 157369237
Start: 1099415
End: 1099900
Strand: Direct
Name: yjjA [H]
Synonym: Spro_0994
Alternate gene names: 157369237
Gene position: 1099415-1099900 (Clockwise)
Preceding gene: 157369236
Following gene: 157369238
Centisome position: 20.18
GC content: 55.76
Gene sequence:
>486_bases ATGAACACCAAGCAACGTTTACTGTTGGCACTGACATTGACCACCGCTATGACCTGTGGCGCGGCTCAGGCTGCCGGACT GATGGATTCTCTCAGCAGCGCCGCCGGTGAACTGAGCAAGTCAGGCGGCAGCACTGGCGGCACGTCACTGTCTTCACTAA CCGGCTTGTTGAACGGCGGTGATAAAGCGCTGAGTTCCAACAGCATGACCAATGCCGCCGGCATCCTGCAGTACTGTGTG AAAAACAACGTACTGTCAGGCAACAGCACTGAAGCGGTGCAGGACAAGTTGTTGAGTAAACTGGGTATCAGCAGCCCTGA GAACGCCAAGAGCCAGGACTACCAGCAAGGGCTGGGCGGTCTGCTGCAAACCGGCGAAGGCAAGAGCCTGGATCTGAACA GCCTGGGCACCTCGCAAATTACCGAAAAAGTGAAGCAAAAGGCCTGCGATCTGGTACTGAAGCAGGGCGCATCCTTTATT TCCTGA
Upstream 100 bases:
>100_bases GCATTGCGCTTATTGCACCGGATAGGCCCGCCTGATTTCCCCCGCCGTACAGGGCAATGGAAGCAGGCAGGAATGGCGAG ATAACAGGAGTTTTACCCTA
Downstream 100 bases:
>100_bases TAGCGTAAACGGCGGCTAACAACAGTTACCGCCGTTTTAATTTGTATAAGCATGAAAACATGAAAAAAATTCTGATGATC TCGCTGTTCGCAGGGATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Protein P-18 [H]
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MNTKQRLLLALTLTTAMTCGAAQAAGLMDSLSSAAGELSKSGGSTGGTSLSSLTGLLNGGDKALSSNSMTNAAGILQYCV KNNVLSGNSTEAVQDKLLSKLGISSPENAKSQDYQQGLGGLLQTGEGKSLDLNSLGTSQITEKVKQKACDLVLKQGASFI S
Sequences:
>Translated_161_residues MNTKQRLLLALTLTTAMTCGAAQAAGLMDSLSSAAGELSKSGGSTGGTSLSSLTGLLNGGDKALSSNSMTNAAGILQYCV KNNVLSGNSTEAVQDKLLSKLGISSPENAKSQDYQQGLGGLLQTGEGKSLDLNSLGTSQITEKVKQKACDLVLKQGASFI S >Mature_161_residues MNTKQRLLLALTLTTAMTCGAAQAAGLMDSLSSAAGELSKSGGSTGGTSLSSLTGLLNGGDKALSSNSMTNAAGILQYCV KNNVLSGNSTEAVQDKLLSKLGISSPENAKSQDYQQGLGGLLQTGEGKSLDLNSLGTSQITEKVKQKACDLVLKQGASFI S
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082434, Length=163, Percent_Identity=46.6257668711656, Blast_Score=137, Evalue=4e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019637 [H]
Pfam domain/function: PF10696 DUF2501 [H]
EC number: NA
Molecular weight: Translated: 16305; Mature: 16305
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTKQRLLLALTLTTAMTCGAAQAAGLMDSLSSAAGELSKSGGSTGGTSLSSLTGLLNGG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCC DKALSSNSMTNAAGILQYCVKNNVLSGNSTEAVQDKLLSKLGISSPENAKSQDYQQGLGG CHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH LLQTGEGKSLDLNSLGTSQITEKVKQKACDLVLKQGASFIS HHCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCHHCCC >Mature Secondary Structure MNTKQRLLLALTLTTAMTCGAAQAAGLMDSLSSAAGELSKSGGSTGGTSLSSLTGLLNGG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCC DKALSSNSMTNAAGILQYCVKNNVLSGNSTEAVQDKLLSKLGISSPENAKSQDYQQGLGG CHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH LLQTGEGKSLDLNSLGTSQITEKVKQKACDLVLKQGASFIS HHCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2844800; 7610040; 9278503 [H]