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The map label for this gene is yecS [H]

Identifier: 157369179

GI number: 157369179

Start: 1033717

End: 1034373

Strand: Direct

Name: yecS [H]

Synonym: Spro_0934

Alternate gene names: 157369179

Gene position: 1033717-1034373 (Clockwise)

Preceding gene: 157369178

Following gene: 157369180

Centisome position: 18.97

GC content: 56.77

Gene sequence:

>657_bases
ATGCTGACTTTTACCGACTGGGACATTGTGCGCAACCTGCTGTTGGCGGCACGCTGGACCTTACTGCTGTCGCTGACGGC
ATTTTTGGGCGGCACCCTGGTGACGCTGCCGCTGTTATTGCTGCGCCTGAGCAAGCGTAAGTGGGCGCTGCGGTTTGTTC
GCGGTTATTCCGAGCTGTTTCAGGGCACGCCGCTGCTGATGCAGCTGTTCCTGGCCTTTTTTGGGCTGGCACTGTTCGGC
ATTGATGTGAGTCCCTGGACCGCGGCCGCGTTGGCGCTGACGTTATTCACCAGCGCTTTTCTGGTGGATATCTGGTCCGG
CAGCATCGCCGCATTGCCGAAAGGCCAGTGGGAAGCGTCGCACTGTCTGGGGCTGAGTTTTGGCCAGACGTTGGTGCGGG
TCATTGTGCCGCAGGCTGTGCGCATCGCCATTGCACCTACCGTCGGCTTTTCGGTTCAGGTGATCAAGGGGACCGCATTG
GCGTCGATCATCGGTTTTGTCGAACTGACCAAGGCCGGCACCATGCTGAACAACGTCACTTATCAACCCTTTAAAGTTTT
TGGTCTGGTCGCGCTGGGCTATTTCCTGATGTGTTATCCGCTGTCGCGCTACAGTCATTATCTGGAGAAGAAATTCCATG
CCGCTCATCACAATTAA

Upstream 100 bases:

>100_bases
AGGTGTATCTGGTGACGGCGCTGTTTTACCTGTTGTTATCGATACTGATGCGCCAGCTGTTGCTGGCCGCCGGACGCCGT
TTTCTGGGGAGCCAGGGCTG

Downstream 100 bases:

>100_bases
TCAGGTTCAAAAATATTACGGTCAGAACCATGTACTGAAGGGCGTGGATCTGGATATCGATATGGGCCAGGTGATTTCGA
TCATCGGCCGTAGCGGCTCC

Product: polar amino acid ABC transporter inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MLTFTDWDIVRNLLLAARWTLLLSLTAFLGGTLVTLPLLLLRLSKRKWALRFVRGYSELFQGTPLLMQLFLAFFGLALFG
IDVSPWTAAALALTLFTSAFLVDIWSGSIAALPKGQWEASHCLGLSFGQTLVRVIVPQAVRIAIAPTVGFSVQVIKGTAL
ASIIGFVELTKAGTMLNNVTYQPFKVFGLVALGYFLMCYPLSRYSHYLEKKFHAAHHN

Sequences:

>Translated_218_residues
MLTFTDWDIVRNLLLAARWTLLLSLTAFLGGTLVTLPLLLLRLSKRKWALRFVRGYSELFQGTPLLMQLFLAFFGLALFG
IDVSPWTAAALALTLFTSAFLVDIWSGSIAALPKGQWEASHCLGLSFGQTLVRVIVPQAVRIAIAPTVGFSVQVIKGTAL
ASIIGFVELTKAGTMLNNVTYQPFKVFGLVALGYFLMCYPLSRYSHYLEKKFHAAHHN
>Mature_218_residues
MLTFTDWDIVRNLLLAARWTLLLSLTAFLGGTLVTLPLLLLRLSKRKWALRFVRGYSELFQGTPLLMQLFLAFFGLALFG
IDVSPWTAAALALTLFTSAFLVDIWSGSIAALPKGQWEASHCLGLSFGQTLVRVIVPQAVRIAIAPTVGFSVQVIKGTAL
ASIIGFVELTKAGTMLNNVTYQPFKVFGLVALGYFLMCYPLSRYSHYLEKKFHAAHHN

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=212, Percent_Identity=33.4905660377358, Blast_Score=121, Evalue=4e-29,
Organism=Escherichia coli, GI87082239, Length=168, Percent_Identity=33.3333333333333, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1787086, Length=169, Percent_Identity=33.1360946745562, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI1788645, Length=203, Percent_Identity=31.5270935960591, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1788646, Length=155, Percent_Identity=30.9677419354839, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1787030, Length=209, Percent_Identity=27.7511961722488, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI48994930, Length=183, Percent_Identity=32.2404371584699, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1786874, Length=164, Percent_Identity=27.4390243902439, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1787087, Length=124, Percent_Identity=33.8709677419355, Blast_Score=61, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24113; Mature: 24113

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTFTDWDIVRNLLLAARWTLLLSLTAFLGGTLVTLPLLLLRLSKRKWALRFVRGYSELF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGTPLLMQLFLAFFGLALFGIDVSPWTAAALALTLFTSAFLVDIWSGSIAALPKGQWEAS
CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHH
HCLGLSFGQTLVRVIVPQAVRIAIAPTVGFSVQVIKGTALASIIGFVELTKAGTMLNNVT
HHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCC
YQPFKVFGLVALGYFLMCYPLSRYSHYLEKKFHAAHHN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLTFTDWDIVRNLLLAARWTLLLSLTAFLGGTLVTLPLLLLRLSKRKWALRFVRGYSELF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGTPLLMQLFLAFFGLALFGIDVSPWTAAALALTLFTSAFLVDIWSGSIAALPKGQWEAS
CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHH
HCLGLSFGQTLVRVIVPQAVRIAIAPTVGFSVQVIKGTALASIIGFVELTKAGTMLNNVT
HHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCC
YQPFKVFGLVALGYFLMCYPLSRYSHYLEKKFHAAHHN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]