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The map label for this gene is yfhH [C]

Identifier: 157369176

GI number: 157369176

Start: 1031190

End: 1032029

Strand: Direct

Name: yfhH [C]

Synonym: Spro_0931

Alternate gene names: 157369176

Gene position: 1031190-1032029 (Clockwise)

Preceding gene: 157369169

Following gene: 157369177

Centisome position: 18.92

GC content: 60.12

Gene sequence:

>840_bases
ATGCAGCAGATTGATGAACGCCTGCGCGGGGAATATCCGCAGCTCACGCCGCAGGAACAGCGGGTGGCCGATTTTATTTT
CGATCACTTCGATGACCTGATCAGCTACAACAGCGCCGAGCTGGCGCGGCTGAGCGGGGTATCCAAAGCCACCGTCAGCC
GCTTGTTCAAACGCCTGGGTTATCCGAGCTACCGCGCGATGCGTGACGAATTGCGCACTCTGCGCCAGAGCGGTATGCCG
CTGACCGATAACCGTGACGCGGTGCAGGGCAATACCCTGTTGGCGCGCCACTACAAGCAGGAAATGGCTAACCTTACCCA
GTGGGTGAACCATATTGATGCCGAGCAGTTCAACGCAGTGATTGCTGCTTTGGTGCAGGCGCGGCGAGTGGTGTTAATGG
GGTTTCGCAACAGCTATCCGGTGGCGATGCACCTGCGCCAGCAGCTGATGCAGGTGCGTGAGCAGGTGTTACTGGTGCCG
CAGCCGGGTCAGACACTGGCGGAAGAGCTGGTGAGTCTGTCCCCGCAAGATGTAGCGATAGTGGTGGCGTTTCGCCGCCG
ACCGCGCCAGGTGCGGGCGTTGTTGACGCAGTTGCAGGTTCAGCAGGTACCGACACTGCTGGTGTGTGAACCCCAGGCAC
AGGCGCTAATCCCGCTGGCTAACTGGCATCTGGCGGCACCGCTCGACAGCGTTTCCGCCTTTGACAGCTATTCCGCCGCC
ATGAGTCTGGCCAACCTGCTCAGCAATGCTCTGCTGCACGAGACGTTGGCGCAAGGGCGGCAACGAATTCACCAAATTGC
CGATCTGTATATGGGGCTGGATGAGCTGGAGCAGCGCTGA

Upstream 100 bases:

>100_bases
AGAGACGTTCCATGTTTTCTGCCAGGACAATAATCGCTTGCCAGCGGGTGGATTGGCCGTGCTATGTTCCGCTGAAACAA
AGGTTACAGCAGGAGTAGCA

Downstream 100 bases:

>100_bases
GCCCAGCGCCATTTTGGTGCTTTCGCACTTTGATGGTGCGCAATTTGCTCACTTTATTCATTCACCCTGTCATTACGTTG
GCAGGGAAATTCCCATCTTA

Product: RpiR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator RpiR Family; Transcriptional Regulator; RpiR-Family Transcriptional Regulatory Protein; Sugar Isomerase; N-Acetylmannosamine Kinase; RipR Family Transcriptional Regulator; RpiR Family Transcriptional Regulatory Protein; SIS Domain Protein; HTH/SIS Domain-Containing Protein; Helix-Turn-Helix Domain RpiR Family

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MQQIDERLRGEYPQLTPQEQRVADFIFDHFDDLISYNSAELARLSGVSKATVSRLFKRLGYPSYRAMRDELRTLRQSGMP
LTDNRDAVQGNTLLARHYKQEMANLTQWVNHIDAEQFNAVIAALVQARRVVLMGFRNSYPVAMHLRQQLMQVREQVLLVP
QPGQTLAEELVSLSPQDVAIVVAFRRRPRQVRALLTQLQVQQVPTLLVCEPQAQALIPLANWHLAAPLDSVSAFDSYSAA
MSLANLLSNALLHETLAQGRQRIHQIADLYMGLDELEQR

Sequences:

>Translated_279_residues
MQQIDERLRGEYPQLTPQEQRVADFIFDHFDDLISYNSAELARLSGVSKATVSRLFKRLGYPSYRAMRDELRTLRQSGMP
LTDNRDAVQGNTLLARHYKQEMANLTQWVNHIDAEQFNAVIAALVQARRVVLMGFRNSYPVAMHLRQQLMQVREQVLLVP
QPGQTLAEELVSLSPQDVAIVVAFRRRPRQVRALLTQLQVQQVPTLLVCEPQAQALIPLANWHLAAPLDSVSAFDSYSAA
MSLANLLSNALLHETLAQGRQRIHQIADLYMGLDELEQR
>Mature_279_residues
MQQIDERLRGEYPQLTPQEQRVADFIFDHFDDLISYNSAELARLSGVSKATVSRLFKRLGYPSYRAMRDELRTLRQSGMP
LTDNRDAVQGNTLLARHYKQEMANLTQWVNHIDAEQFNAVIAALVQARRVVLMGFRNSYPVAMHLRQQLMQVREQVLLVP
QPGQTLAEELVSLSPQDVAIVVAFRRRPRQVRALLTQLQVQQVPTLLVCEPQAQALIPLANWHLAAPLDSVSAFDSYSAA
MSLANLLSNALLHETLAQGRQRIHQIADLYMGLDELEQR

Specific function: Unknown

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31721; Mature: 31721

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQIDERLRGEYPQLTPQEQRVADFIFDHFDDLISYNSAELARLSGVSKATVSRLFKRLG
CCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCC
YPSYRAMRDELRTLRQSGMPLTDNRDAVQGNTLLARHYKQEMANLTQWVNHIDAEQFNAV
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
IAALVQARRVVLMGFRNSYPVAMHLRQQLMQVREQVLLVPQPGQTLAEELVSLSPQDVAI
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHCCCCCHHH
VVAFRRRPRQVRALLTQLQVQQVPTLLVCEPQAQALIPLANWHLAAPLDSVSAFDSYSAA
HHHHHHCHHHHHHHHHHHHHHHCCEEEEECCCHHHCCHHHCCHHHCCHHHHHHHHHHHHH
MSLANLLSNALLHETLAQGRQRIHQIADLYMGLDELEQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCC
>Mature Secondary Structure
MQQIDERLRGEYPQLTPQEQRVADFIFDHFDDLISYNSAELARLSGVSKATVSRLFKRLG
CCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCC
YPSYRAMRDELRTLRQSGMPLTDNRDAVQGNTLLARHYKQEMANLTQWVNHIDAEQFNAV
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
IAALVQARRVVLMGFRNSYPVAMHLRQQLMQVREQVLLVPQPGQTLAEELVSLSPQDVAI
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHCCCCCHHH
VVAFRRRPRQVRALLTQLQVQQVPTLLVCEPQAQALIPLANWHLAAPLDSVSAFDSYSAA
HHHHHHCHHHHHHHHHHHHHHHCCEEEEECCCHHHCCHHHCCHHHCCHHHHHHHHHHHHH
MSLANLLSNALLHETLAQGRQRIHQIADLYMGLDELEQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA