| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is 157369107
Identifier: 157369107
GI number: 157369107
Start: 956824
End: 957333
Strand: Reverse
Name: 157369107
Synonym: Spro_0862
Alternate gene names: NA
Gene position: 957333-956824 (Counterclockwise)
Preceding gene: 157369108
Following gene: 157369106
Centisome position: 17.57
GC content: 56.27
Gene sequence:
>510_bases ATGGCACTGCCAAAAAAACTGAAATATCTGAACCTGTTTAACGACGGCTTCAACTACATGGGCGTGGTCTCCGCCATGAC CCTGCCAAAACTGACCCGTAAGCTGGAAAAATTCCGCGGCGGCGGCATGAGCGGCGCAGCCTCGGTGGACTTCGGTCTGG ATGACGATGCGCTGGTAGTCGAATGGACCATGGGCGGCATCGATGAGCTGGTGCTGAAACAATGGGGCCGCGTCGACGCG GTACCGCTGCGCTTTACCGGTTCTTTCCAGCGTGACGACACCGGCGAAGTATCGGCACTCGAAGTCGTGATGCGCGGTCG CCACAAAGAAATCGACAGCGGTGACTTCAAACAAGGCGAAGACACCGAGACCAAGGTTTCTACCGACTGTACCTACTTCA AACTGAGCATCGACGGCAAAGAGCTGATCGAGATCGATACCATCAACATGATTGAAAAAGTCGACGGCGTGGATCTGCTG GCGGCCCACCGCCGCGCTATCGGCCTGTAA
Upstream 100 bases:
>100_bases CCGGTACCGCCGCTGGAAGATTTAACCCTGCGCCAGCGCATCACCGACCGTTACCTGGCGAACTTCGCCGCGTCCGTGAA CAGCTAAGGAGACCTGAATA
Downstream 100 bases:
>100_bases TTTATCACTTCAATGGCCAGCCTTGGTGCTGGCCCTGTTTCCCTGACAATAATTGGATACCCCCATGGAACTGAATGCAT CCCCAGAAAATACCGTTGTA
Product: phage major tail tube protein
Products: NA
Alternate protein names: Tail Tube Protein; Phage Tail Tube Protein FII; Tail Fiber Component Of Prophage; Phage-Related Tail Tube Protein; Phage Tail Tube Protein; Tail Tube Protein FII; Contractile Tail Tube Protein; Phage Tail Tube-Like Protein; Pyocin R2_PP Tail Tube Protein GpFII; Phage-Related Tail Protein; Prophage Tail Tube Protein; Phage P2 FII-Like Protein; Bacteriophage Tail Tube Protein FII; Phage Protein; Bacteriophage-Related Tail Tube FII Protein; Prophage; Pyocin R2_PP Tail Tube Protein; Phage Tail Fiber Component; Bacteriophage P2 Tail Sheath Protein GPFII; Tail Tube Protein Prophage; Phage Tail Protein
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MALPKKLKYLNLFNDGFNYMGVVSAMTLPKLTRKLEKFRGGGMSGAASVDFGLDDDALVVEWTMGGIDELVLKQWGRVDA VPLRFTGSFQRDDTGEVSALEVVMRGRHKEIDSGDFKQGEDTETKVSTDCTYFKLSIDGKELIEIDTINMIEKVDGVDLL AAHRRAIGL
Sequences:
>Translated_169_residues MALPKKLKYLNLFNDGFNYMGVVSAMTLPKLTRKLEKFRGGGMSGAASVDFGLDDDALVVEWTMGGIDELVLKQWGRVDA VPLRFTGSFQRDDTGEVSALEVVMRGRHKEIDSGDFKQGEDTETKVSTDCTYFKLSIDGKELIEIDTINMIEKVDGVDLL AAHRRAIGL >Mature_168_residues ALPKKLKYLNLFNDGFNYMGVVSAMTLPKLTRKLEKFRGGGMSGAASVDFGLDDDALVVEWTMGGIDELVLKQWGRVDAV PLRFTGSFQRDDTGEVSALEVVMRGRHKEIDSGDFKQGEDTETKVSTDCTYFKLSIDGKELIEIDTINMIEKVDGVDLLA AHRRAIGL
Specific function: Unknown
COG id: COG3498
COG function: function code R; Phage tail tube protein FII
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18710; Mature: 18578
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALPKKLKYLNLFNDGFNYMGVVSAMTLPKLTRKLEKFRGGGMSGAASVDFGLDDDALVV CCCCHHHHEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCEEE EWTMGGIDELVLKQWGRVDAVPLRFTGSFQRDDTGEVSALEVVMRGRHKEIDSGDFKQGE EEECCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC DTETKVSTDCTYFKLSIDGKELIEIDTINMIEKVDGVDLLAAHRRAIGL CCCCEEECCCEEEEEEECCCCEEEEHHHHHHHHCCCHHHHHHHHHHCCC >Mature Secondary Structure ALPKKLKYLNLFNDGFNYMGVVSAMTLPKLTRKLEKFRGGGMSGAASVDFGLDDDALVV CCCHHHHEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCEEE EWTMGGIDELVLKQWGRVDAVPLRFTGSFQRDDTGEVSALEVVMRGRHKEIDSGDFKQGE EEECCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC DTETKVSTDCTYFKLSIDGKELIEIDTINMIEKVDGVDLLAAHRRAIGL CCCCEEECCCEEEEEEECCCCEEEEHHHHHHHHCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA