| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is chbB [H]
Identifier: 157369079
GI number: 157369079
Start: 929828
End: 930208
Strand: Direct
Name: chbB [H]
Synonym: Spro_0834
Alternate gene names: 157369079
Gene position: 929828-930208 (Clockwise)
Preceding gene: 157369077
Following gene: 157369080
Centisome position: 17.06
GC content: 49.34
Gene sequence:
>381_bases ATGGCTATTGCATCTGGCAAACAAATGACACGGGGCTTTTTTGATTATCTTGAGGGATTGGGTATGGAAAAGAAAAAAAT CTATCTGTTTTGTTCTGCTGGTATGTCGACTTCCCTGCTGGTTTCAAAAATGAAAGCACAGGCCGAGAAGTACGAAGTGC CGGTGATCATTGCCGCCTATCCTGAGGCGTTGGCCGCAGAAAAGGGTGCCGAGGCGGATTTGATTCTGCTTGGGCCACAG ATTGCCTACACGCTCGCCGAAGTGCAAAAGCAGTTACCCAACAAGCCCGTTGAAGTGATCGACTCTGCCTTATACGGCAA GCTCGATGGCCTGGGCGTGTTGAAGGCCGCAGTCGCCACCATAAAAAAAGCTAACCAATAA
Upstream 100 bases:
>100_bases CTTACTGATGATGGCTTACCGTTCCGCTTCACTGCCTCCGTATACTGTCTGCAACCAGGGCAAAGTAACGGAAATTTTCA TAAGGAATGTGCGTGAGGCA
Downstream 100 bases:
>100_bases AGGGGTCTGCCGTGAATACGTTAATTGCCTCGTTGGAAAAGGTCATTCTGCCCTTTGCCGTGAAAATTGGTAAACAGCCC CATGTTAATGCCATCAAAAA
Product: PTS system N,N'-diacetylchitobiose-specific transporter subunit IIB
Products: NA
Alternate protein names: PTS system N,N'-diacetylchitobiose-specific EIIB component [H]
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MAIASGKQMTRGFFDYLEGLGMEKKKIYLFCSAGMSTSLLVSKMKAQAEKYEVPVIIAAYPEALAAEKGAEADLILLGPQ IAYTLAEVQKQLPNKPVEVIDSALYGKLDGLGVLKAAVATIKKANQ
Sequences:
>Translated_126_residues MAIASGKQMTRGFFDYLEGLGMEKKKIYLFCSAGMSTSLLVSKMKAQAEKYEVPVIIAAYPEALAAEKGAEADLILLGPQ IAYTLAEVQKQLPNKPVEVIDSALYGKLDGLGVLKAAVATIKKANQ >Mature_125_residues AIASGKQMTRGFFDYLEGLGMEKKKIYLFCSAGMSTSLLVSKMKAQAEKYEVPVIIAAYPEALAAEKGAEADLILLGPQI AYTLAEVQKQLPNKPVEVIDSALYGKLDGLGVLKAAVATIKKANQ
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1440
COG function: function code G; Phosphotransferase system cellobiose-specific component IIB
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-3 domain [H]
Homologues:
Organism=Escherichia coli, GI1788034, Length=93, Percent_Identity=81.7204301075269, Blast_Score=158, Evalue=1e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014350 - InterPro: IPR003501 - InterPro: IPR013012 [H]
Pfam domain/function: PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 13497; Mature: 13366
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: PS51100 PTS_EIIB_TYPE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIASGKQMTRGFFDYLEGLGMEKKKIYLFCSAGMSTSLLVSKMKAQAEKYEVPVIIAAY CCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEC PEALAAEKGAEADLILLGPQIAYTLAEVQKQLPNKPVEVIDSALYGKLDGLGVLKAAVAT CHHHHHCCCCCCCEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHH IKKANQ HHHCCC >Mature Secondary Structure AIASGKQMTRGFFDYLEGLGMEKKKIYLFCSAGMSTSLLVSKMKAQAEKYEVPVIIAAY CCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEC PEALAAEKGAEADLILLGPQIAYTLAEVQKQLPNKPVEVIDSALYGKLDGLGVLKAAVAT CHHHHHCCCCCCCEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHH IKKANQ HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]