| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157369041
Identifier: 157369041
GI number: 157369041
Start: 889719
End: 890909
Strand: Direct
Name: 157369041
Synonym: Spro_0796
Alternate gene names: NA
Gene position: 889719-890909 (Clockwise)
Preceding gene: 157369040
Following gene: 157369042
Centisome position: 16.33
GC content: 54.83
Gene sequence:
>1191_bases ATGCGAAACAGGATTGTGATTGTCGGTGGTGGCACTGGCGGGACTATATTGGCCAATTTACTGGCGGCGAAATTACACCG GGAGATATTGAATAATAAAGTTGAGTTATTAATGCTTTCGGACTCTCCGGTTCATTATTATAAACCCGCTTTTATGTACG TGGCCTTCAACGCTTTTTTTAAGCAGGAGTTGACCCGCTCTCAACAAAGTCTGCTGCGCCCGGAAATAAAATTTATTGTC GATAAAGCCGAGCGTTTTGATTTATCCCAAAGGGTCATTCACTGCCAAAGTGGTAAACATTACTCCTATGATTTTCTGGT GTTTGCCACCGGCTGTGTGCCCTGGCCGGATCGTATCGACGGGCTGGCGCAGGCGGGCGATCATTTCTATCAATATCAGG CCGCCCGACAGCTGGCGCAAAAGCTGGCGACAATTGAAAAAGGCCGAATCTTTATTACCGTCTCCTTCCCCGAAACGCCC AATGTGCCGCATCAGTGCGGCATTGCCCCGATAGAAACCACGCTGATGCTCGATGATTACCTGCGTCGACGCGGGGTGCG TAAGGCAATCGAAATTGTTTATACCTATCCCAGCGTCTCGCAGCTGCTGCGTAACTGCCTGTTTTTGCAACGCCCGACCG CCGAAGCCTTGCCCGGTATCTTCGCAGCGCGTGATATCCGTCATCAGCGTGGCTTTACTCTCAGCCGGGTGGACGCACAG CAGAAAGTCGCTTACTCCGCCGAGGGAGAAGAACAGCCGTTCGATATTCTGATGGCCACGCCGCCGATCCGCGCCGTAGA AGCGGTGCGCAATACCGACCTCAGCGAGGGTAATAATGGCGAAGGCTGGCTGCCGACCGACCACCAGACGCTGCAGGTTT ATGGCCAGCAGGGGGTTTATGTCATCGGCGATACGGTGGATCTGCCGGTCAGCAAGGCCGGTGGCTCTTGCCACAATCAG GCGCCGGTGATCGCCGACAATATCGTGGCTGAACTGCGGCTGGGCCAGACCGTCAGCCACTATGACGGCAAGGTGCAGGC GATCGCTCAAATGGGGCTACAGGCCGGTATGCCACTGGTTTACGACTATCGCCACGATGTGCTGCCGACGCCGTCAACCA AAGTGGGCGGCATGCTGCGCAACGGCTTTAATCGCGGGCTGTATTGGGCAACGGTACGCGGGCTGATTTAA
Upstream 100 bases:
>100_bases AGACTGCCAGTAGGGCAGAGTGTTTATCCTCCGTCGTCCTGCCTCAGTTCGTTTCCCATAACATGGCTGCCGACCCGCAG GCCGGCTGGGCGAGGGTTTG
Downstream 100 bases:
>100_bases CGGGGGGCTTATGAACGCATCTGAACAAGCATCCCTGGCACCCTTGCTGGACAAGCTGCAGCCACTGCTGGCCGGTGGGC GGCTCGATAACGTGGTCGAT
Product: FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Products: NA
Alternate protein names: FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Oxidoreductase; NAD(FAD)-Dependent Dehydrogenase; Pyridine Nucleotide-Disulphide Oxidoreductase; SulfideQuinone Oxidoreductase; Fad-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Sulfide Dehydrogenase; Sulfide Dehydrogenase Flavoprotein Subunit; Twin-Arginine Translocation Pathway Signal; Sulfide-Quinone Reductase; Flavoprotein Reductase; Sulfide Quinone Oxidoreductase-Like Protein; NADH Dehydrogenase FAD-Containing Subunit; FAD-Dependent Pyridine Nucleotide-Disulphideoxido Reductase; Dehydrogenase; Anti-Anti-Sigma Regulatory Factor; Sulfide Quinone-Rductase; Filamentous Hemagglutinin; Sulphide Quinone Reductase; Flavoprotein Reductase Conjectural; Oxidoreductase FAD-Dependent; Pyridine Nucleotide-Disulfide Family Oxidoreductase; Oxidoreductase Family Protein; Flavoprotein Reductase-Like Protein; Oxidoreductase Pyridine Nucleotide-Disulphide Family; Pyridine Nucleotide-Disulphide Oxidoreductase Class-II; Sulfide-Quinone Oxidoreductase; SulfideQuinone Reductase; NAD(FAD)-Dependent Dehydrogenase-Like Protein; Pyridine Nucleotide-Disulfide Oxidoreductase Family; Sulfide Dehydrogenase Related Protein; Dehydrogenase/Reductase; Pyridine Nucleotide-Disulfide Oxidoreductase
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MRNRIVIVGGGTGGTILANLLAAKLHREILNNKVELLMLSDSPVHYYKPAFMYVAFNAFFKQELTRSQQSLLRPEIKFIV DKAERFDLSQRVIHCQSGKHYSYDFLVFATGCVPWPDRIDGLAQAGDHFYQYQAARQLAQKLATIEKGRIFITVSFPETP NVPHQCGIAPIETTLMLDDYLRRRGVRKAIEIVYTYPSVSQLLRNCLFLQRPTAEALPGIFAARDIRHQRGFTLSRVDAQ QKVAYSAEGEEQPFDILMATPPIRAVEAVRNTDLSEGNNGEGWLPTDHQTLQVYGQQGVYVIGDTVDLPVSKAGGSCHNQ APVIADNIVAELRLGQTVSHYDGKVQAIAQMGLQAGMPLVYDYRHDVLPTPSTKVGGMLRNGFNRGLYWATVRGLI
Sequences:
>Translated_396_residues MRNRIVIVGGGTGGTILANLLAAKLHREILNNKVELLMLSDSPVHYYKPAFMYVAFNAFFKQELTRSQQSLLRPEIKFIV DKAERFDLSQRVIHCQSGKHYSYDFLVFATGCVPWPDRIDGLAQAGDHFYQYQAARQLAQKLATIEKGRIFITVSFPETP NVPHQCGIAPIETTLMLDDYLRRRGVRKAIEIVYTYPSVSQLLRNCLFLQRPTAEALPGIFAARDIRHQRGFTLSRVDAQ QKVAYSAEGEEQPFDILMATPPIRAVEAVRNTDLSEGNNGEGWLPTDHQTLQVYGQQGVYVIGDTVDLPVSKAGGSCHNQ APVIADNIVAELRLGQTVSHYDGKVQAIAQMGLQAGMPLVYDYRHDVLPTPSTKVGGMLRNGFNRGLYWATVRGLI >Mature_396_residues MRNRIVIVGGGTGGTILANLLAAKLHREILNNKVELLMLSDSPVHYYKPAFMYVAFNAFFKQELTRSQQSLLRPEIKFIV DKAERFDLSQRVIHCQSGKHYSYDFLVFATGCVPWPDRIDGLAQAGDHFYQYQAARQLAQKLATIEKGRIFITVSFPETP NVPHQCGIAPIETTLMLDDYLRRRGVRKAIEIVYTYPSVSQLLRNCLFLQRPTAEALPGIFAARDIRHQRGFTLSRVDAQ QKVAYSAEGEEQPFDILMATPPIRAVEAVRNTDLSEGNNGEGWLPTDHQTLQVYGQQGVYVIGDTVDLPVSKAGGSCHNQ APVIADNIVAELRLGQTVSHYDGKVQAIAQMGLQAGMPLVYDYRHDVLPTPSTKVGGMLRNGFNRGLYWATVRGLI
Specific function: Unknown
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI10864011, Length=361, Percent_Identity=22.4376731301939, Blast_Score=96, Evalue=6e-20, Organism=Caenorhabditis elegans, GI115534373, Length=293, Percent_Identity=24.9146757679181, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI24657386, Length=363, Percent_Identity=25.6198347107438, Blast_Score=101, Evalue=1e-21, Organism=Drosophila melanogaster, GI24657391, Length=363, Percent_Identity=25.6198347107438, Blast_Score=101, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44191; Mature: 44191
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNRIVIVGGGTGGTILANLLAAKLHREILNNKVELLMLSDSPVHYYKPAFMYVAFNAFF CCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHH KQELTRSQQSLLRPEIKFIVDKAERFDLSQRVIHCQSGKHYSYDFLVFATGCVPWPDRID HHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHEEECCCCCCCEEEEEEEECCCCCHHHHH GLAQAGDHFYQYQAARQLAQKLATIEKGRIFITVSFPETPNVPHQCGIAPIETTLMLDDY HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHH LRRRGVRKAIEIVYTYPSVSQLLRNCLFLQRPTAEALPGIFAARDIRHQRGFTLSRVDAQ HHHHHHHHHHHEEECCCHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHCCCEEECCCHH QKVAYSAEGEEQPFDILMATPPIRAVEAVRNTDLSEGNNGEGWLPTDHQTLQVYGQQGVY HHHEECCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCEE VIGDTVDLPVSKAGGSCHNQAPVIADNIVAELRLGQTVSHYDGKVQAIAQMGLQAGMPLV EEECCEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCCCEE YDYRHDVLPTPSTKVGGMLRNGFNRGLYWATVRGLI EECCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCC >Mature Secondary Structure MRNRIVIVGGGTGGTILANLLAAKLHREILNNKVELLMLSDSPVHYYKPAFMYVAFNAFF CCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHH KQELTRSQQSLLRPEIKFIVDKAERFDLSQRVIHCQSGKHYSYDFLVFATGCVPWPDRID HHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHEEECCCCCCCEEEEEEEECCCCCHHHHH GLAQAGDHFYQYQAARQLAQKLATIEKGRIFITVSFPETPNVPHQCGIAPIETTLMLDDY HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHH LRRRGVRKAIEIVYTYPSVSQLLRNCLFLQRPTAEALPGIFAARDIRHQRGFTLSRVDAQ HHHHHHHHHHHEEECCCHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHCCCEEECCCHH QKVAYSAEGEEQPFDILMATPPIRAVEAVRNTDLSEGNNGEGWLPTDHQTLQVYGQQGVY HHHEECCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCEE VIGDTVDLPVSKAGGSCHNQAPVIADNIVAELRLGQTVSHYDGKVQAIAQMGLQAGMPLV EEECCEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCCCEE YDYRHDVLPTPSTKVGGMLRNGFNRGLYWATVRGLI EECCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA