| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is fruR [H]
Identifier: 157368995
GI number: 157368995
Start: 837280
End: 838284
Strand: Direct
Name: fruR [H]
Synonym: Spro_0750
Alternate gene names: 157368995
Gene position: 837280-838284 (Clockwise)
Preceding gene: 157368994
Following gene: 157368997
Centisome position: 15.37
GC content: 58.51
Gene sequence:
>1005_bases GTGAAACTGGATGAAATCGCGCGTCTCGCAGGCGTTTCGCGCACCACGGCCAGTTATGTCATCAACGGCAAGGCGAAGCA GTATCGTGTCAGCGATAAAACCGTCGAAAAAGTGATGGCCGTGGTCAGGGAGCACAACTATCACCCGAATGCCGTCGCGG CAGGGCTGCGCGCCGGGCGAACTCGTTCAATCGGTCTGGTGATACCGGATCTGGAAAACACCAGCTATACCCGCATCGCC AATTATCTGGAGCGTCAGGCCCGTCAACGCGGTTACCAGCTGTTGATTGCCTGTTCGGAAGATCAGCCGGATAACGAAAT GCGCTGTATTGAGCATCTGCTGCAACGCCAGGTCGACGCGTTAATCGTTTCTACCGCCTTGCCGCCGGAGCATCCGTTCT ATCAGCGCTGGGCCAATGATCCGCTGCCAATTATCGCACTGGATCGGGCGCTGGATCGCGAGCATTTCATCAGTGTGGTC GGGGCCGACCAAGAGGATTCCTTCGCACTGGCGCAGGAGCTTCGTACCTTCCCGGCAGAGTCGGTACTGTATCTGGGAGC GTTGCCGGAGCTTTCCGTCAGCTTCCTGCGTGAGCAGGGTTTCCGCGAAGCCTGGCAGGATGACGAACGACCTGTCGATT ATCTGTATGCCAACAGCTATGAGCGTGAGGCGGCCGGCGTGTTGTTTGCCGAATGGCTGAAAACCCATCCTATGCCCCAG GCGCTGTTCACTACCTCATTCTCTTTGTTGCAAGGGGTGATGGATGTGACGCTGAAGCAACGTGGCCGTTTGCCGACCGA TCTGGCCATCGCCACCTTCGGCGATCACGAGCTGTTGGACTTCCTTGAGTGTCCGGTTCTGGCGGTCGCTCAGCGCCACC GTGACGTGGCCGAGCGGGTGCTTGAACTGGTACTGGCCAGCCTGGATGAGCCGCGTAAACCCAAGCCGGGTCTGACGCGT ATCCGTCGTAATTTGTTCCGCCGCGGCAGCCTTAGCCGGAAGTAA
Upstream 100 bases:
>100_bases CTGTTAGATCGCAGAGGCTGGATTGAATAACCGCACAGGATGCGATGGTTAATCCGAGCATGGTTTTCACTTCTATTTTC AGCGTCATTAAGGGGTTAAC
Downstream 100 bases:
>100_bases ACCCAAACAGGAGCGCCCCGTTGCGCTCCTGCTTCACACGTAGCCCGCCACCCTGAACAACCTTCTGCAGTATTCCAGAA AATAGCCATACACCACGCCC
Product: DNA-binding transcriptional regulator FruR
Products: NA
Alternate protein names: Catabolite repressor/activator [H]
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MKLDEIARLAGVSRTTASYVINGKAKQYRVSDKTVEKVMAVVREHNYHPNAVAAGLRAGRTRSIGLVIPDLENTSYTRIA NYLERQARQRGYQLLIACSEDQPDNEMRCIEHLLQRQVDALIVSTALPPEHPFYQRWANDPLPIIALDRALDREHFISVV GADQEDSFALAQELRTFPAESVLYLGALPELSVSFLREQGFREAWQDDERPVDYLYANSYEREAAGVLFAEWLKTHPMPQ ALFTTSFSLLQGVMDVTLKQRGRLPTDLAIATFGDHELLDFLECPVLAVAQRHRDVAERVLELVLASLDEPRKPKPGLTR IRRNLFRRGSLSRK
Sequences:
>Translated_334_residues MKLDEIARLAGVSRTTASYVINGKAKQYRVSDKTVEKVMAVVREHNYHPNAVAAGLRAGRTRSIGLVIPDLENTSYTRIA NYLERQARQRGYQLLIACSEDQPDNEMRCIEHLLQRQVDALIVSTALPPEHPFYQRWANDPLPIIALDRALDREHFISVV GADQEDSFALAQELRTFPAESVLYLGALPELSVSFLREQGFREAWQDDERPVDYLYANSYEREAAGVLFAEWLKTHPMPQ ALFTTSFSLLQGVMDVTLKQRGRLPTDLAIATFGDHELLDFLECPVLAVAQRHRDVAERVLELVLASLDEPRKPKPGLTR IRRNLFRRGSLSRK >Mature_334_residues MKLDEIARLAGVSRTTASYVINGKAKQYRVSDKTVEKVMAVVREHNYHPNAVAAGLRAGRTRSIGLVIPDLENTSYTRIA NYLERQARQRGYQLLIACSEDQPDNEMRCIEHLLQRQVDALIVSTALPPEHPFYQRWANDPLPIIALDRALDREHFISVV GADQEDSFALAQELRTFPAESVLYLGALPELSVSFLREQGFREAWQDDERPVDYLYANSYEREAAGVLFAEWLKTHPMPQ ALFTTSFSLLQGVMDVTLKQRGRLPTDLAIATFGDHELLDFLECPVLAVAQRHRDVAERVLELVLASLDEPRKPKPGLTR IRRNLFRRGSLSRK
Specific function: Represses some operons but activates others. It is implicated in the regulation of a large number of operons encoding enzymes which comprise central pathways of carbon metabolism. Binds D-fructose as an inducer [H]
COG id: COG1609
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1786268, Length=333, Percent_Identity=89.4894894894895, Blast_Score=621, Evalue=1e-179, Organism=Escherichia coli, GI1790194, Length=339, Percent_Identity=28.6135693215339, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1787580, Length=289, Percent_Identity=22.8373702422145, Blast_Score=85, Evalue=6e-18, Organism=Escherichia coli, GI1787948, Length=335, Percent_Identity=21.7910447761194, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1789068, Length=276, Percent_Identity=26.0869565217391, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1790369, Length=306, Percent_Identity=22.8758169934641, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1789202, Length=128, Percent_Identity=32.8125, Blast_Score=65, Evalue=6e-12, Organism=Escherichia coli, GI1788474, Length=278, Percent_Identity=24.8201438848921, Blast_Score=65, Evalue=7e-12, Organism=Escherichia coli, GI1790715, Length=124, Percent_Identity=30.6451612903226, Blast_Score=62, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012781 - InterPro: IPR000843 - InterPro: IPR010982 - InterPro: IPR001761 [H]
Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]
EC number: NA
Molecular weight: Translated: 37951; Mature: 37951
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: PS00356 HTH_LACI_1 ; PS50932 HTH_LACI_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLDEIARLAGVSRTTASYVINGKAKQYRVSDKTVEKVMAVVREHNYHPNAVAAGLRAGR CCHHHHHHHHCCCHHHHHHEECCCCCEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHCCC TRSIGLVIPDLENTSYTRIANYLERQARQRGYQLLIACSEDQPDNEMRCIEHLLQRQVDA CCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHH LIVSTALPPEHPFYQRWANDPLPIIALDRALDREHFISVVGADQEDSFALAQELRTFPAE HHHHCCCCCCCCHHHHHCCCCCCEEEHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHCCHH SVLYLGALPELSVSFLREQGFREAWQDDERPVDYLYANSYEREAAGVLFAEWLKTHPMPQ HHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCH ALFTTSFSLLQGVMDVTLKQRGRLPTDLAIATFGDHELLDFLECPVLAVAQRHRDVAERV HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHCHHHHHHHHHHHHHHHH LELVLASLDEPRKPKPGLTRIRRNLFRRGSLSRK HHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKLDEIARLAGVSRTTASYVINGKAKQYRVSDKTVEKVMAVVREHNYHPNAVAAGLRAGR CCHHHHHHHHCCCHHHHHHEECCCCCEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHCCC TRSIGLVIPDLENTSYTRIANYLERQARQRGYQLLIACSEDQPDNEMRCIEHLLQRQVDA CCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHH LIVSTALPPEHPFYQRWANDPLPIIALDRALDREHFISVVGADQEDSFALAQELRTFPAE HHHHCCCCCCCCHHHHHCCCCCCEEEHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHCCHH SVLYLGALPELSVSFLREQGFREAWQDDERPVDYLYANSYEREAAGVLFAEWLKTHPMPQ HHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCH ALFTTSFSLLQGVMDVTLKQRGRLPTDLAIATFGDHELLDFLECPVLAVAQRHRDVAERV HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHCHHHHHHHHHHHHHHHH LELVLASLDEPRKPKPGLTRIRRNLFRRGSLSRK HHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]