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The map label for this gene is yijO [C]

Identifier: 157368878

GI number: 157368878

Start: 698465

End: 699361

Strand: Direct

Name: yijO [C]

Synonym: Spro_0633

Alternate gene names: 157368878

Gene position: 698465-699361 (Clockwise)

Preceding gene: 157368877

Following gene: 157368879

Centisome position: 12.82

GC content: 58.42

Gene sequence:

>897_bases
ATGCAGAAAAGTACCGGTTTTATCGCCAATATTGATATCTGCAAAGAGTACGATGCGCGTTATGCCACCGATGAAGTGCA
TTACGAAACCTTTGCCGGGCTGGCGGCCTTTTTTGGCCGCGATATGCAGGTGCACTGGCACGATCGTTACTTCCAGGTGC
ACTTTCTGGAGACCGGCAAGATTGAGCTGCAGTTGGACTCACAGCACTATTCGGTGCAGGCGCCGCTGTTTATCCTCACG
CCACCCTCGGTGCCGCATGCGTTCTTCACCGAGCCGGACAGCGACGGCCACGTGCTGACGGTACGTCAGGAGCTGATCTG
GCCGCTGCTGGAACGGCTGTACCCCGGTAGCAACCTGGCGCTGGACATGCCGGGTATTTGCCTGTCGATGGCAGATGTGC
TGCAAGAGCTGACGGCGCTCAGCCATTACTGGGCACTGATCCGCCGCGAATTCAGCCAGCGCCTGGCTGGTCGCGAACAG
ACGCTGGCGCTGCTGGCGCAGGCGGTGTTCACCCTGCTGTTACGCAATGCGTCGCTGGAGGACTCTGCCGCCAGTGGGGT
GCGTGGCGAGCTGAAATTATTCCAACGTTTCAACAAGATGGTGGATGAACGCTTCCGCGATCACCTGCCGGTGCCGGACT
ATGCCCAGGCGCTGGGGGTCACCGAGTCACGGCTCAATGATCTGTGTCGGCGTTTCGCCAATCAGCCCCCCAAACGACTG
ATATTCGATCGCCTGCTGCGTGAGGCCAAACGCATGCTGCTGTTCAGTGCCTGCACGGTGCATGAAACCGCTTATAGCCT
GGGTTTTAAGGATCCGGCTTATTTCGCCCGTTTTTTCAATCGGCTGGAAGGCTGTTCCCCTTCGAGCTACCGCGCCGCAC
AACACTCCCTTTCGTAA

Upstream 100 bases:

>100_bases
GTATTCCGATGCAGGGTTCGCGGCCGCGGGCCACGCCATAATGGGGATAGGCTACGGGCGCGGCATGTGGCGCCCCTTAC
CGGAGGAATGAGGTCAATAG

Downstream 100 bases:

>100_bases
GCTGGATCACAGTTTGCAGCGATAGTGGCAAAGCTGCCTGAAAAGTACCGGCGATTGCCGCAAAAGTCTCTTCTCGAAAT
CGGCGTTGGGGGCTTCAATT

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: AraC Family Transcriptional Regulator; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; 4-Hydroxyphenylacetate Catabolism Regulatory Protein HpaA; Transcriptional Regulator PobR; Transcriptional Regulatory Protein; Regulator Of 4HPA-Hydroxylase Operon; Helix-Turn-Helix- Domain Containing Protein AraC Type; PobR Regulator; Bacterial Regulatory Helix-Turn-Helix Protein; Transcriptional Regulator Arac Family; Transcriptional Regulator AraC Family Protein; Helix-Turn-Helix AraC Type; Transcriptional Regulator Pobr Arac Family Protein; Regulator Of 4hpa-Hydroxylase Operon; Transcriptional Regulator Protein; AraC Family Regulatory Protein; AraC Family Transcriptional Regulatory Protein; Transcriptional Regulatory Protein AraC-Type; AraC Family Transcription Regulator Protein; AraC-Family Transcriptional Regulator; AraC/XylS Family Transcription Factor; AraC-Type Regulatory Protein

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MQKSTGFIANIDICKEYDARYATDEVHYETFAGLAAFFGRDMQVHWHDRYFQVHFLETGKIELQLDSQHYSVQAPLFILT
PPSVPHAFFTEPDSDGHVLTVRQELIWPLLERLYPGSNLALDMPGICLSMADVLQELTALSHYWALIRREFSQRLAGREQ
TLALLAQAVFTLLLRNASLEDSAASGVRGELKLFQRFNKMVDERFRDHLPVPDYAQALGVTESRLNDLCRRFANQPPKRL
IFDRLLREAKRMLLFSACTVHETAYSLGFKDPAYFARFFNRLEGCSPSSYRAAQHSLS

Sequences:

>Translated_298_residues
MQKSTGFIANIDICKEYDARYATDEVHYETFAGLAAFFGRDMQVHWHDRYFQVHFLETGKIELQLDSQHYSVQAPLFILT
PPSVPHAFFTEPDSDGHVLTVRQELIWPLLERLYPGSNLALDMPGICLSMADVLQELTALSHYWALIRREFSQRLAGREQ
TLALLAQAVFTLLLRNASLEDSAASGVRGELKLFQRFNKMVDERFRDHLPVPDYAQALGVTESRLNDLCRRFANQPPKRL
IFDRLLREAKRMLLFSACTVHETAYSLGFKDPAYFARFFNRLEGCSPSSYRAAQHSLS
>Mature_298_residues
MQKSTGFIANIDICKEYDARYATDEVHYETFAGLAAFFGRDMQVHWHDRYFQVHFLETGKIELQLDSQHYSVQAPLFILT
PPSVPHAFFTEPDSDGHVLTVRQELIWPLLERLYPGSNLALDMPGICLSMADVLQELTALSHYWALIRREFSQRLAGREQ
TLALLAQAVFTLLLRNASLEDSAASGVRGELKLFQRFNKMVDERFRDHLPVPDYAQALGVTESRLNDLCRRFANQPPKRL
IFDRLLREAKRMLLFSACTVHETAYSLGFKDPAYFARFFNRLEGCSPSSYRAAQHSLS

Specific function: Unknown

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34200; Mature: 34200

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKSTGFIANIDICKEYDARYATDEVHYETFAGLAAFFGRDMQVHWHDRYFQVHFLETGK
CCCCCCCEEEHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCEEEEEEEECCE
IELQLDSQHYSVQAPLFILTPPSVPHAFFTEPDSDGHVLTVRQELIWPLLERLYPGSNLA
EEEEECCCCEEEECCEEEECCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCE
LDMPGICLSMADVLQELTALSHYWALIRREFSQRLAGREQTLALLAQAVFTLLLRNASLE
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC
DSAASGVRGELKLFQRFNKMVDERFRDHLPVPDYAQALGVTESRLNDLCRRFANQPPKRL
CHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCHHHH
IFDRLLREAKRMLLFSACTVHETAYSLGFKDPAYFARFFNRLEGCSPSSYRAAQHSLS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCC
>Mature Secondary Structure
MQKSTGFIANIDICKEYDARYATDEVHYETFAGLAAFFGRDMQVHWHDRYFQVHFLETGK
CCCCCCCEEEHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCEEEEEEEECCE
IELQLDSQHYSVQAPLFILTPPSVPHAFFTEPDSDGHVLTVRQELIWPLLERLYPGSNLA
EEEEECCCCEEEECCEEEECCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCE
LDMPGICLSMADVLQELTALSHYWALIRREFSQRLAGREQTLALLAQAVFTLLLRNASLE
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC
DSAASGVRGELKLFQRFNKMVDERFRDHLPVPDYAQALGVTESRLNDLCRRFANQPPKRL
CHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCHHHH
IFDRLLREAKRMLLFSACTVHETAYSLGFKDPAYFARFFNRLEGCSPSSYRAAQHSLS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA