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The map label for this gene is hipB [C]

Identifier: 157368812

GI number: 157368812

Start: 629991

End: 630239

Strand: Direct

Name: hipB [C]

Synonym: Spro_0567

Alternate gene names: 157368812

Gene position: 629991-630239 (Clockwise)

Preceding gene: 157368811

Following gene: 157368813

Centisome position: 11.56

GC content: 53.41

Gene sequence:

>249_bases
ATGAAAATCACCTCGGCACAGATGCTGGCGCATACATTACGCAACGAGCGTAAAAAGCGTAACCAAAGCCAAAGCAAAAC
CGCTGACAGTGTTGGGTTAAAACAGGCGACGGTTTCTGCCTTTGAAAACAACCCGGACGGCACCCGGCTGGAGACGTTGT
TTAAACTGCTTGCTGCGCTGGACCTGGAGCTACAGGTCACCCCGCGTGGTAAGCCGGTAGATCCCAAGACCTGGGATCAG
GAGTGGTAA

Upstream 100 bases:

>100_bases
AGCCCTCGATGTGGAGAGGGCATCTATCCCCTACAGAGGATAATACTTGCGTTATCCGCTATAGGGGATAATACTCATTT
CATCCGCTTGGGAGGATAAA

Downstream 100 bases:

>100_bases
GCATGGAAAAGTTACGCGTGGCGCTGAATGGCACTGTTGTTGGGACGCTGGAAAAGCATGCCGGCGGCGCGATGTCGTTT
GTTTACCAGGAAGAGTGGCT

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Helix-Turn-Helix Domain Protein; Transcriptional Regulator Hipb Ortholog

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MKITSAQMLAHTLRNERKKRNQSQSKTADSVGLKQATVSAFENNPDGTRLETLFKLLAALDLELQVTPRGKPVDPKTWDQ
EW

Sequences:

>Translated_82_residues
MKITSAQMLAHTLRNERKKRNQSQSKTADSVGLKQATVSAFENNPDGTRLETLFKLLAALDLELQVTPRGKPVDPKTWDQ
EW
>Mature_82_residues
MKITSAQMLAHTLRNERKKRNQSQSKTADSVGLKQATVSAFENNPDGTRLETLFKLLAALDLELQVTPRGKPVDPKTWDQ
EW

Specific function: Binds To Operator Sites With The Consensus Sequence 5-'Tatccn(8)GGATA-3' And Repress The Hip Operon Promoter. [C]

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787786, Length=84, Percent_Identity=40.4761904761905, Blast_Score=62, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9280; Mature: 9280

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKITSAQMLAHTLRNERKKRNQSQSKTADSVGLKQATVSAFENNPDGTRLETLFKLLAAL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHH
DLELQVTPRGKPVDPKTWDQEW
CCCEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKITSAQMLAHTLRNERKKRNQSQSKTADSVGLKQATVSAFENNPDGTRLETLFKLLAAL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHH
DLELQVTPRGKPVDPKTWDQEW
CCCEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA