| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is msrA
Identifier: 157368705
GI number: 157368705
Start: 506868
End: 507509
Strand: Reverse
Name: msrA
Synonym: Spro_0458
Alternate gene names: 157368705
Gene position: 507509-506868 (Counterclockwise)
Preceding gene: 157368709
Following gene: 157368704
Centisome position: 9.31
GC content: 58.26
Gene sequence:
>642_bases GTGGTGCCATTTTTTGATAAAACACAAACTGTCGACCAGGCAAACGCATTACCTGGCCGCACCACTCCCATGCCGGTTGC CACGCTTAACGTGGTCACCGATCACTCAATGACCCAAGTGCCGGACGGCCTGGAAGTAGCGATCTTCGCCATGGGGTGTT TCTGGGGAGTGGAACGCCTGTTCTGGCAGCAGCAAGGGGTTTACAGCACCGCAGCAGGCTACAGCGGTGGCTATACGCCA AACCCGACCTACCGCGAAGTATGCAGCGGCCAAACGGGCCACACGGAAGTGGTACGAGTGGTATTCGATCCGAAAATCAT CAGCTACAAACAGTTGCTGCAGGTATTCTGGGAGAACCACGATCCGGCGCAGGGCATGCGTCAGGGCGGCGACGTCGGTA CCCAGTATCGCTCGGCGATTTATACGCTGACGCCGGAGCAGCAGACCGAAGCGGAAAGCAGCCTGCAGCGTTTCCAACAG GCGATGGAGCAGGCCGGCGATAAACGCGCCATCACCACCGAGGTCGCACCGGCCCTGCCGTTCTACTATGCCGAGGACGA CCACCAGCAGTACCTGTACAAAAACCCTGAAGGATACTGTGGTCTGGGTGGTATCGGTGTTTGCTTGCCACCACAGGGCT AA
Upstream 100 bases:
>100_bases ATAATCTCAATATGTAGCTTATTGTGGGCAAAGTTGCGGCTAGATACAACTTAACTGCCGCCTCTTGGGCCAATTCTTAC TGTGACAACAGGAGTCAACC
Downstream 100 bases:
>100_bases GCCGCAGGTTGGAGGTAATTTTTTAACCGCTGGCGGCCCCGGTAGGGCTGCTGCTATACTGTGCGGGCCGGATCATCGGC CCGATAACCTTCTTTCTGGT
Product: methionine sulfoxide reductase A
Products: NA
Alternate protein names: Protein-methionine-S-oxide reductase; Peptide-methionine (S)-S-oxide reductase; Peptide Met(O) reductase
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MVPFFDKTQTVDQANALPGRTTPMPVATLNVVTDHSMTQVPDGLEVAIFAMGCFWGVERLFWQQQGVYSTAAGYSGGYTP NPTYREVCSGQTGHTEVVRVVFDPKIISYKQLLQVFWENHDPAQGMRQGGDVGTQYRSAIYTLTPEQQTEAESSLQRFQQ AMEQAGDKRAITTEVAPALPFYYAEDDHQQYLYKNPEGYCGLGGIGVCLPPQG
Sequences:
>Translated_213_residues MVPFFDKTQTVDQANALPGRTTPMPVATLNVVTDHSMTQVPDGLEVAIFAMGCFWGVERLFWQQQGVYSTAAGYSGGYTP NPTYREVCSGQTGHTEVVRVVFDPKIISYKQLLQVFWENHDPAQGMRQGGDVGTQYRSAIYTLTPEQQTEAESSLQRFQQ AMEQAGDKRAITTEVAPALPFYYAEDDHQQYLYKNPEGYCGLGGIGVCLPPQG >Mature_213_residues MVPFFDKTQTVDQANALPGRTTPMPVATLNVVTDHSMTQVPDGLEVAIFAMGCFWGVERLFWQQQGVYSTAAGYSGGYTP NPTYREVCSGQTGHTEVVRVVFDPKIISYKQLLQVFWENHDPAQGMRQGGDVGTQYRSAIYTLTPEQQTEAESSLQRFQQ AMEQAGDKRAITTEVAPALPFYYAEDDHQQYLYKNPEGYCGLGGIGVCLPPQG
Specific function: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
COG id: COG0225
COG function: function code O; Peptide methionine sulfoxide reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the msrA Met sulfoxide reductase family
Homologues:
Organism=Homo sapiens, GI6912516, Length=204, Percent_Identity=54.9019607843137, Blast_Score=231, Evalue=3e-61, Organism=Homo sapiens, GI208609995, Length=181, Percent_Identity=56.9060773480663, Blast_Score=219, Evalue=1e-57, Organism=Homo sapiens, GI208609993, Length=204, Percent_Identity=41.1764705882353, Blast_Score=147, Evalue=6e-36, Organism=Escherichia coli, GI1790665, Length=210, Percent_Identity=76.6666666666667, Blast_Score=327, Evalue=3e-91, Organism=Caenorhabditis elegans, GI17533973, Length=154, Percent_Identity=38.3116883116883, Blast_Score=107, Evalue=3e-24, Organism=Saccharomyces cerevisiae, GI6320881, Length=169, Percent_Identity=32.5443786982249, Blast_Score=97, Evalue=1e-21, Organism=Drosophila melanogaster, GI24664627, Length=145, Percent_Identity=40, Blast_Score=98, Evalue=4e-21, Organism=Drosophila melanogaster, GI45553131, Length=141, Percent_Identity=39.7163120567376, Blast_Score=93, Evalue=1e-19, Organism=Drosophila melanogaster, GI24664631, Length=145, Percent_Identity=38.6206896551724, Blast_Score=91, Evalue=6e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MSRA_SERP5 (A8G8X6)
Other databases:
- EMBL: CP000826 - RefSeq: YP_001476694.1 - ProteinModelPortal: A8G8X6 - SMR: A8G8X6 - STRING: A8G8X6 - GeneID: 5603268 - GenomeReviews: CP000826_GR - KEGG: spe:Spro_0458 - eggNOG: COG0225 - HOGENOM: HBG748152 - OMA: SAIYCTT - ProtClustDB: PRK00058 - BioCyc: SPRO399741:SPRO_0458-MONOMER - HAMAP: MF_01401 - InterPro: IPR002569 - Gene3D: G3DSA:3.30.1060.10 - TIGRFAMs: TIGR00401
Pfam domain/function: PF01625 PMSR; SSF55068 MsrA
EC number: =1.8.4.11
Molecular weight: Translated: 23590; Mature: 23590
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: ACT_SITE 53-53
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPFFDKTQTVDQANALPGRTTPMPVATLNVVTDHSMTQVPDGLEVAIFAMGCFWGVERL CCCCCCCCCCHHHHCCCCCCCCCCCEEEEEEEECCCHHHCCCCHHHHHHHHHHHHHHHHH FWQQQGVYSTAAGYSGGYTPNPTYREVCSGQTGHTEVVRVVFDPKIISYKQLLQVFWENH HHHHCCCEECCCCCCCCCCCCCCHHHHHCCCCCCHHEEEEEECCCHHHHHHHHHHHHCCC DPAQGMRQGGDVGTQYRSAIYTLTPEQQTEAESSLQRFQQAMEQAGDKRAITTEVAPALP CHHHHHHCCCCCCHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCCC FYYAEDDHQQYLYKNPEGYCGLGGIGVCLPPQG EEECCCCCHHHHHCCCCCCCCCCCCEEECCCCC >Mature Secondary Structure MVPFFDKTQTVDQANALPGRTTPMPVATLNVVTDHSMTQVPDGLEVAIFAMGCFWGVERL CCCCCCCCCCHHHHCCCCCCCCCCCEEEEEEEECCCHHHCCCCHHHHHHHHHHHHHHHHH FWQQQGVYSTAAGYSGGYTPNPTYREVCSGQTGHTEVVRVVFDPKIISYKQLLQVFWENH HHHHCCCEECCCCCCCCCCCCCCHHHHHCCCCCCHHEEEEEECCCHHHHHHHHHHHHCCC DPAQGMRQGGDVGTQYRSAIYTLTPEQQTEAESSLQRFQQAMEQAGDKRAITTEVAPALP CHHHHHHCCCCCCHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCCC FYYAEDDHQQYLYKNPEGYCGLGGIGVCLPPQG EEECCCCCHHHHHCCCCCCCCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA