| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157368456
Identifier: 157368456
GI number: 157368456
Start: 232232
End: 233368
Strand: Reverse
Name: 157368456
Synonym: Spro_0207
Alternate gene names: NA
Gene position: 233368-232232 (Counterclockwise)
Preceding gene: 157368457
Following gene: 157368455
Centisome position: 4.28
GC content: 55.58
Gene sequence:
>1137_bases ATGGCGATATTTACCCGCAGTTTACCCCTGGCCTTGTTAGTCCTGTTGCCCGGTGTTGATGCCGCTTTATTGTCACGTCA GCAAGTAGATGAAATGTTGGCCCCGCTGGGGTCTGACAACCGTTTCGATAGCAGCAAAGCCATCGATTGGGGTGTCTTGC CTGGCCCATTTTATACTCCCGAACTCGGTCTTGGCCTCGGTACCGCTATCGTTGGGATCTATCGGCCGGACAGCCACGAC AACGTCAGCCAAAATTCGACGCTGGCGTTAAAAGGCTTTGTCAGCTCGACGGGGGCCTTTGGTGTCGGTTTCCAAAACCA CAGTTTTTTCGCTGACGACCAATGGCGTTTCTTCGCCGACGGCTCTCTCAATAATATGCCCACCTATTTCTGGGGCACCG GCTACCAGGCTGGGCATAACGAGGGGAACAAGGAAAAGTACACTCAACAGTCATTCCAGATAGCGCCACAGCTGTTGTAC CGCATTGCCAGCGCTACCTACGCGGGGGTTGGCTGGGACTTTTCCTCAACCCACGCCAGCGATCCCGATGAGGGTGACAA CAGCCTGCTAAGGGCTCAAAACGCCGGTGTGTCCTCACTGAGTTCAGGAATCAGCGGTTCGCTGAGTTACGACACCCGTG ATTTCGTTTCCAATGCCAGTCGGGGTCAGTTTTTTCGCCTGAGCGACACTTATTTTGCACCGGAGTTGGGCGGTGACAGC CGTTTCAATGCCGTTGAAGGCCAATACAATGCCTACCACAGTTTGAGTGCGAAAAGCGTGCTGGCGTTGGATGCCTTCAG CCGCCTGACCACTGGCGAGGTCCCCTGGGACAGGCTGTCTGAGCTGGGGGACGACCAACGAATGCGTGGCTATTATCAAG GCCGCTACCGCGACAGGAATGTGTTCAGTAGCCAGGTCGAATATCGTCGCAAGCTAAACTGGCGGCACGGGTACGTGCTG TGGGCCGGTGCCGGAACGCTAAGCAGCAAGGCCGGCGATCTGGGCCGTGGTCCCTGGTTGCCTACGCTGGGAGCGGGTTA CCGTTTTGAATTCAAACCGAAAATGAACGTACGGCTCGATTTTGGCGTCGGGCGTGGAAGCAGCGGATTTTACTTTCAGG TTGGGGAAGCTTTTTAA
Upstream 100 bases:
>100_bases TTGGCACGCAATATGAGATCACACGAAACTTCAACGTGTTGACCGAGTTTGGCTTTAGCCAACGCAACAGTTTCATGGTT TCCGGTGAATATCGCTTCTG
Downstream 100 bases:
>100_bases TGCGTTCTGTTGCACTGCTATTTTTTCTGTTATTGCCCCTCTCGCTGCCCGCCAAACCGTTGGAAACGCTGATCACTTCG CAACCCACCGGTGAAAGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MAIFTRSLPLALLVLLPGVDAALLSRQQVDEMLAPLGSDNRFDSSKAIDWGVLPGPFYTPELGLGLGTAIVGIYRPDSHD NVSQNSTLALKGFVSSTGAFGVGFQNHSFFADDQWRFFADGSLNNMPTYFWGTGYQAGHNEGNKEKYTQQSFQIAPQLLY RIASATYAGVGWDFSSTHASDPDEGDNSLLRAQNAGVSSLSSGISGSLSYDTRDFVSNASRGQFFRLSDTYFAPELGGDS RFNAVEGQYNAYHSLSAKSVLALDAFSRLTTGEVPWDRLSELGDDQRMRGYYQGRYRDRNVFSSQVEYRRKLNWRHGYVL WAGAGTLSSKAGDLGRGPWLPTLGAGYRFEFKPKMNVRLDFGVGRGSSGFYFQVGEAF
Sequences:
>Translated_378_residues MAIFTRSLPLALLVLLPGVDAALLSRQQVDEMLAPLGSDNRFDSSKAIDWGVLPGPFYTPELGLGLGTAIVGIYRPDSHD NVSQNSTLALKGFVSSTGAFGVGFQNHSFFADDQWRFFADGSLNNMPTYFWGTGYQAGHNEGNKEKYTQQSFQIAPQLLY RIASATYAGVGWDFSSTHASDPDEGDNSLLRAQNAGVSSLSSGISGSLSYDTRDFVSNASRGQFFRLSDTYFAPELGGDS RFNAVEGQYNAYHSLSAKSVLALDAFSRLTTGEVPWDRLSELGDDQRMRGYYQGRYRDRNVFSSQVEYRRKLNWRHGYVL WAGAGTLSSKAGDLGRGPWLPTLGAGYRFEFKPKMNVRLDFGVGRGSSGFYFQVGEAF >Mature_377_residues AIFTRSLPLALLVLLPGVDAALLSRQQVDEMLAPLGSDNRFDSSKAIDWGVLPGPFYTPELGLGLGTAIVGIYRPDSHDN VSQNSTLALKGFVSSTGAFGVGFQNHSFFADDQWRFFADGSLNNMPTYFWGTGYQAGHNEGNKEKYTQQSFQIAPQLLYR IASATYAGVGWDFSSTHASDPDEGDNSLLRAQNAGVSSLSSGISGSLSYDTRDFVSNASRGQFFRLSDTYFAPELGGDSR FNAVEGQYNAYHSLSAKSVLALDAFSRLTTGEVPWDRLSELGDDQRMRGYYQGRYRDRNVFSSQVEYRRKLNWRHGYVLW AGAGTLSSKAGDLGRGPWLPTLGAGYRFEFKPKMNVRLDFGVGRGSSGFYFQVGEAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41585; Mature: 41454
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIFTRSLPLALLVLLPGVDAALLSRQQVDEMLAPLGSDNRFDSSKAIDWGVLPGPFYTP CCEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC ELGLGLGTAIVGIYRPDSHDNVSQNSTLALKGFVSSTGAFGVGFQNHSFFADDQWRFFAD CCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCEEECCCCCCEECCCCEEEEEC GSLNNMPTYFWGTGYQAGHNEGNKEKYTQQSFQIAPQLLYRIASATYAGVGWDFSSTHAS CCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCC DPDEGDNSLLRAQNAGVSSLSSGISGSLSYDTRDFVSNASRGQFFRLSDTYFAPELGGDS CCCCCCCCEEECCCCCHHHHHCCCCCCCCCCHHHHHCCCCCCCEEEECCCEECCCCCCCC RFNAVEGQYNAYHSLSAKSVLALDAFSRLTTGEVPWDRLSELGDDQRMRGYYQGRYRDRN CCCEECCCCCHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHCCCCCCCH VFSSQVEYRRKLNWRHGYVLWAGAGTLSSKAGDLGRGPWLPTLGAGYRFEFKPKMNVRLD HHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEE FGVGRGSSGFYFQVGEAF ECCCCCCCCCEEEECCCC >Mature Secondary Structure AIFTRSLPLALLVLLPGVDAALLSRQQVDEMLAPLGSDNRFDSSKAIDWGVLPGPFYTP CEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC ELGLGLGTAIVGIYRPDSHDNVSQNSTLALKGFVSSTGAFGVGFQNHSFFADDQWRFFAD CCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCEEECCCCCCEECCCCEEEEEC GSLNNMPTYFWGTGYQAGHNEGNKEKYTQQSFQIAPQLLYRIASATYAGVGWDFSSTHAS CCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCC DPDEGDNSLLRAQNAGVSSLSSGISGSLSYDTRDFVSNASRGQFFRLSDTYFAPELGGDS CCCCCCCCEEECCCCCHHHHHCCCCCCCCCCHHHHHCCCCCCCEEEECCCEECCCCCCCC RFNAVEGQYNAYHSLSAKSVLALDAFSRLTTGEVPWDRLSELGDDQRMRGYYQGRYRDRN CCCEECCCCCHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHCCCCCCCH VFSSQVEYRRKLNWRHGYVLWAGAGTLSSKAGDLGRGPWLPTLGAGYRFEFKPKMNVRLD HHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEE FGVGRGSSGFYFQVGEAF ECCCCCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA