BacMap

Definition	Serratia proteamaculans 568 chromosome, complete genome.
Accession	NC_009832
Length	5,448,853

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The map label for this gene is rhlB [H]

Identifier: 157368407

GI number: 157368407

Start: 178269

End: 179555

Strand: Reverse

Name: rhlB [H]

Synonym: Spro_0158

Alternate gene names: 157368407

Gene position: 179555-178269 (Counterclockwise)

Preceding gene: 157368423

Following gene: 157368406

Centisome position: 3.3

GC content: 55.79

Gene sequence:

>1287_bases
ATGAGCAAAACACACTTGACCGAACAGAAGTTTTCCGACTTCGCCCTGCACCCGTTAGTCCTTGAAGCCCTTGAAAAGAA
AGGGTTTCAACATTGCACGCCTATCCAGGCGTTAGCATTGCCGCTCACGCTCTCTGGGCGTGACGTTGCAGGTCAGGCGC
AAACCGGTACCGGAAAGACGTTGGCATTTTTAACGTCTACTTTTCACTATTTGCTTTCTCACCCGGCGAAACAGGATCGC
AAGATCAACCAGCCGCGCGCCTTGATCATGGCACCAACGCGTGAACTCGCGGTGCAGATCCACTCCGATGCGGAAGCCCT
GTCCCAGTCCACAGGCCTGAAAATGGGTCTGGCATACGGCGGCGATGGCTACGACAAACAGCTGAAAGTGCTGGAAAGCG
GCGTGGATATCCTGGTGGGAACTACCGGTCGTTTAATTGATTACGCCAAACAGAACTATATCGATCTGGGCGCGATCCAG
GTTGTGGTGCTGGATGAAGCCGACCGCATGTACGATCTGGGCTTTATCAAAGACATTCGCTGGTTGTTCCGCCGCATGCC
TGCGGTCGATCAACGCCTGAACATGCTGTTCTCTGCCACCCTTTCCTATCGCGTACGCGAGCTGGCTTTCGAGCAGATGA
ACAACGCTGAATATGTTGAAGTGGAACCGGAACAGAAAACCGGCCACCGCATTAAAGAAGAATTGTTCTACCCGTCCAAC
GAAGAAAAAATGCGTCTGCTGCAGACGTTGATCGAAGAAGAGTGGCCTGACCGCTGCATCATCTTCGCCAACACCAAGCA
CCGCTGTGAAGACGTTTGGGGCCATCTGGCTGCCGATGGTCACCGCGTAGGCCTGTTGACCGGCGATGTGGCGCAGAAAA
AACGCCTGCGTATTCTCGATGACTTCACCAAGGGCAACCTCGATATTCTGGTCGCTACCGACGTCGCTGCCCGCGGCCTG
CATATTCCGTTGGTTACCCACGTCTTCAACTACGACTTGCCTGACGACTGCGAAGACTACGTTCACCGTATCGGTCGTAC
CGGCCGTGCCGGCGAAAGCGGTCACTCCATCAGCCTGGCTTGCGAAGAGTACGCGCTCAACCTGCCGGCGATCGAAACCT
ATACCGGTCACAGCATTCCGGTGAGCAAGTACAACAGTGATGCGTTATTGAGTGATCTGCCTGCGCCGAAACGCCTGGCA
CGTCCTCGCGGCGGCAACGGCCCACGCCGTAACTCCGCGCCACGTCGTGGCGGTGCGCCACGCAATAACCGTAAACGTTC
AGGCTGA

Upstream 100 bases:

>100_bases
TGTGTCTACCTTGTTGGTGTAGCATTAACCAACCTAAGGTGACTTTATTTCACCGGATACGCTTTCGTAAAGCAATAGTT
AGCTGATATTCTACCACACT

Downstream 100 bases:

>100_bases
TAGACCATGCTCAGTTCCAGCGCACTTTATGCCGCTATCGACCTTGGCTCCAACAGCTTCCACATGTTGGTGGTGCGCGA
GGTGGCCGGCAGTATTCAGA

Product: ATP-dependent RNA helicase RhlB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MSKTHLTEQKFSDFALHPLVLEALEKKGFQHCTPIQALALPLTLSGRDVAGQAQTGTGKTLAFLTSTFHYLLSHPAKQDR
KINQPRALIMAPTRELAVQIHSDAEALSQSTGLKMGLAYGGDGYDKQLKVLESGVDILVGTTGRLIDYAKQNYIDLGAIQ
VVVLDEADRMYDLGFIKDIRWLFRRMPAVDQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLIEEEWPDRCIIFANTKHRCEDVWGHLAADGHRVGLLTGDVAQKKRLRILDDFTKGNLDILVATDVAARGL
HIPLVTHVFNYDLPDDCEDYVHRIGRTGRAGESGHSISLACEEYALNLPAIETYTGHSIPVSKYNSDALLSDLPAPKRLA
RPRGGNGPRRNSAPRRGGAPRNNRKRSG

Sequences:

>Translated_428_residues
MSKTHLTEQKFSDFALHPLVLEALEKKGFQHCTPIQALALPLTLSGRDVAGQAQTGTGKTLAFLTSTFHYLLSHPAKQDR
KINQPRALIMAPTRELAVQIHSDAEALSQSTGLKMGLAYGGDGYDKQLKVLESGVDILVGTTGRLIDYAKQNYIDLGAIQ
VVVLDEADRMYDLGFIKDIRWLFRRMPAVDQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLIEEEWPDRCIIFANTKHRCEDVWGHLAADGHRVGLLTGDVAQKKRLRILDDFTKGNLDILVATDVAARGL
HIPLVTHVFNYDLPDDCEDYVHRIGRTGRAGESGHSISLACEEYALNLPAIETYTGHSIPVSKYNSDALLSDLPAPKRLA
RPRGGNGPRRNSAPRRGGAPRNNRKRSG
>Mature_427_residues
SKTHLTEQKFSDFALHPLVLEALEKKGFQHCTPIQALALPLTLSGRDVAGQAQTGTGKTLAFLTSTFHYLLSHPAKQDRK
INQPRALIMAPTRELAVQIHSDAEALSQSTGLKMGLAYGGDGYDKQLKVLESGVDILVGTTGRLIDYAKQNYIDLGAIQV
VVLDEADRMYDLGFIKDIRWLFRRMPAVDQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNE
EKMRLLQTLIEEEWPDRCIIFANTKHRCEDVWGHLAADGHRVGLLTGDVAQKKRLRILDDFTKGNLDILVATDVAARGLH
IPLVTHVFNYDLPDDCEDYVHRIGRTGRAGESGHSISLACEEYALNLPAIETYTGHSIPVSKYNSDALLSDLPAPKRLAR
PRGGNGPRRNSAPRRGGAPRNNRKRSG

Specific function: Can carry out ATP-dependent unwinding of double stranded RNA. Has a role in RNA decay. Involved in the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI222352149, Length=351, Percent_Identity=38.7464387464387, Blast_Score=231, Evalue=1e-60,
Organism=Homo sapiens, GI41327771, Length=410, Percent_Identity=35.1219512195122, Blast_Score=223, Evalue=2e-58,
Organism=Homo sapiens, GI45446747, Length=413, Percent_Identity=33.6561743341404, Blast_Score=218, Evalue=7e-57,
Organism=Homo sapiens, GI45446743, Length=413, Percent_Identity=33.6561743341404, Blast_Score=218, Evalue=7e-57,
Organism=Homo sapiens, GI148613856, Length=359, Percent_Identity=38.4401114206128, Blast_Score=218, Evalue=7e-57,
Organism=Homo sapiens, GI38201710, Length=359, Percent_Identity=38.4401114206128, Blast_Score=218, Evalue=7e-57,
Organism=Homo sapiens, GI21071032, Length=384, Percent_Identity=35.15625, Blast_Score=217, Evalue=2e-56,
Organism=Homo sapiens, GI55749865, Length=356, Percent_Identity=35.3932584269663, Blast_Score=215, Evalue=7e-56,
Organism=Homo sapiens, GI224593278, Length=357, Percent_Identity=36.6946778711485, Blast_Score=212, Evalue=5e-55,
Organism=Homo sapiens, GI262118318, Length=341, Percent_Identity=35.4838709677419, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI301171467, Length=368, Percent_Identity=35.3260869565217, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI87196351, Length=368, Percent_Identity=35.3260869565217, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI216548263, Length=354, Percent_Identity=34.7457627118644, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI301171475, Length=368, Percent_Identity=35.3260869565217, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI262231852, Length=354, Percent_Identity=34.7457627118644, Blast_Score=210, Evalue=3e-54,
Organism=Homo sapiens, GI13518015, Length=354, Percent_Identity=34.7457627118644, Blast_Score=209, Evalue=3e-54,
Organism=Homo sapiens, GI169881239, Length=369, Percent_Identity=34.6883468834688, Blast_Score=207, Evalue=1e-53,
Organism=Homo sapiens, GI13514809, Length=369, Percent_Identity=34.6883468834688, Blast_Score=207, Evalue=1e-53,
Organism=Homo sapiens, GI4758138, Length=348, Percent_Identity=36.4942528735632, Blast_Score=206, Evalue=4e-53,
Organism=Homo sapiens, GI164419743, Length=377, Percent_Identity=32.8912466843501, Blast_Score=204, Evalue=2e-52,
Organism=Homo sapiens, GI51094101, Length=377, Percent_Identity=32.8912466843501, Blast_Score=204, Evalue=2e-52,
Organism=Homo sapiens, GI41327773, Length=372, Percent_Identity=34.6774193548387, Blast_Score=196, Evalue=4e-50,
Organism=Homo sapiens, GI20149629, Length=373, Percent_Identity=33.2439678284182, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI7661920, Length=370, Percent_Identity=33.5135135135135, Blast_Score=192, Evalue=5e-49,
Organism=Homo sapiens, GI50659095, Length=378, Percent_Identity=34.6560846560847, Blast_Score=191, Evalue=2e-48,
Organism=Homo sapiens, GI13129006, Length=374, Percent_Identity=33.6898395721925, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI164664518, Length=382, Percent_Identity=29.5811518324607, Blast_Score=175, Evalue=9e-44,
Organism=Homo sapiens, GI38569503, Length=358, Percent_Identity=31.2849162011173, Blast_Score=174, Evalue=1e-43,
Organism=Homo sapiens, GI38569505, Length=358, Percent_Identity=31.2849162011173, Blast_Score=173, Evalue=2e-43,
Organism=Homo sapiens, GI41327779, Length=393, Percent_Identity=34.8600508905852, Blast_Score=172, Evalue=6e-43,
Organism=Homo sapiens, GI21040371, Length=358, Percent_Identity=32.9608938547486, Blast_Score=170, Evalue=2e-42,
Organism=Homo sapiens, GI4758112, Length=357, Percent_Identity=32.4929971988796, Blast_Score=169, Evalue=4e-42,
Organism=Homo sapiens, GI18375623, Length=357, Percent_Identity=32.4929971988796, Blast_Score=169, Evalue=4e-42,
Organism=Homo sapiens, GI13514831, Length=353, Percent_Identity=31.1614730878187, Blast_Score=169, Evalue=5e-42,
Organism=Homo sapiens, GI31542656, Length=368, Percent_Identity=32.6086956521739, Blast_Score=167, Evalue=2e-41,
Organism=Homo sapiens, GI41327776, Length=372, Percent_Identity=31.1827956989247, Blast_Score=166, Evalue=4e-41,
Organism=Homo sapiens, GI8922886, Length=371, Percent_Identity=31.266846361186, Blast_Score=166, Evalue=5e-41,
Organism=Homo sapiens, GI6005743, Length=371, Percent_Identity=30.9973045822102, Blast_Score=165, Evalue=9e-41,
Organism=Homo sapiens, GI256223453, Length=367, Percent_Identity=30.2452316076294, Blast_Score=163, Evalue=3e-40,
Organism=Homo sapiens, GI188035877, Length=362, Percent_Identity=30.3867403314917, Blast_Score=162, Evalue=7e-40,
Organism=Homo sapiens, GI4503529, Length=371, Percent_Identity=34.2318059299191, Blast_Score=160, Evalue=3e-39,
Organism=Homo sapiens, GI83700235, Length=371, Percent_Identity=33.6927223719677, Blast_Score=159, Evalue=6e-39,
Organism=Homo sapiens, GI62241022, Length=352, Percent_Identity=31.5340909090909, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI17505907, Length=447, Percent_Identity=28.8590604026846, Blast_Score=155, Evalue=5e-38,
Organism=Homo sapiens, GI38327634, Length=352, Percent_Identity=32.1022727272727, Blast_Score=154, Evalue=1e-37,
Organism=Homo sapiens, GI62241024, Length=331, Percent_Identity=30.8157099697885, Blast_Score=147, Evalue=2e-35,
Organism=Homo sapiens, GI164419732, Length=368, Percent_Identity=30.4347826086957, Blast_Score=144, Evalue=2e-34,
Organism=Homo sapiens, GI256773275, Length=388, Percent_Identity=30.1546391752577, Blast_Score=139, Evalue=5e-33,
Organism=Homo sapiens, GI9506931, Length=404, Percent_Identity=25.990099009901, Blast_Score=132, Evalue=4e-31,
Organism=Homo sapiens, GI9966805, Length=315, Percent_Identity=31.7460317460317, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI4826686, Length=338, Percent_Identity=31.6568047337278, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI154759257, Length=413, Percent_Identity=27.1186440677966, Blast_Score=116, Evalue=5e-26,
Organism=Homo sapiens, GI20336298, Length=208, Percent_Identity=35.0961538461538, Blast_Score=113, Evalue=4e-25,
Organism=Escherichia coli, GI1790214, Length=428, Percent_Identity=88.785046728972, Blast_Score=795, Evalue=0.0,
Organism=Escherichia coli, GI1787016, Length=372, Percent_Identity=39.7849462365591, Blast_Score=267, Evalue=1e-72,
Organism=Escherichia coli, GI87082221, Length=387, Percent_Identity=38.5012919896641, Blast_Score=240, Evalue=2e-64,
Organism=Escherichia coli, GI1788930, Length=389, Percent_Identity=37.0179948586118, Blast_Score=219, Evalue=2e-58,
Organism=Escherichia coli, GI1787605, Length=351, Percent_Identity=37.037037037037, Blast_Score=203, Evalue=2e-53,
Organism=Caenorhabditis elegans, GI71995514, Length=363, Percent_Identity=38.0165289256198, Blast_Score=230, Evalue=1e-60,
Organism=Caenorhabditis elegans, GI17510309, Length=363, Percent_Identity=38.0165289256198, Blast_Score=230, Evalue=1e-60,
Organism=Caenorhabditis elegans, GI17510307, Length=363, Percent_Identity=38.0165289256198, Blast_Score=229, Evalue=1e-60,
Organism=Caenorhabditis elegans, GI71995718, Length=363, Percent_Identity=37.7410468319559, Blast_Score=227, Evalue=1e-59,
Organism=Caenorhabditis elegans, GI32565321, Length=365, Percent_Identity=34.2465753424658, Blast_Score=206, Evalue=2e-53,
Organism=Caenorhabditis elegans, GI86570094, Length=350, Percent_Identity=36.2857142857143, Blast_Score=201, Evalue=5e-52,
Organism=Caenorhabditis elegans, GI115533224, Length=354, Percent_Identity=35.3107344632768, Blast_Score=200, Evalue=1e-51,
Organism=Caenorhabditis elegans, GI17552642, Length=357, Percent_Identity=35.8543417366947, Blast_Score=199, Evalue=2e-51,
Organism=Caenorhabditis elegans, GI17555296, Length=358, Percent_Identity=34.6368715083799, Blast_Score=199, Evalue=3e-51,
Organism=Caenorhabditis elegans, GI71987143, Length=369, Percent_Identity=34.1463414634146, Blast_Score=194, Evalue=9e-50,
Organism=Caenorhabditis elegans, GI17510559, Length=383, Percent_Identity=32.1148825065274, Blast_Score=192, Evalue=2e-49,
Organism=Caenorhabditis elegans, GI71995724, Length=370, Percent_Identity=32.972972972973, Blast_Score=192, Evalue=3e-49,
Organism=Caenorhabditis elegans, GI17507945, Length=358, Percent_Identity=34.9162011173184, Blast_Score=192, Evalue=4e-49,
Organism=Caenorhabditis elegans, GI17507121, Length=370, Percent_Identity=32.972972972973, Blast_Score=191, Evalue=4e-49,
Organism=Caenorhabditis elegans, GI17537549, Length=357, Percent_Identity=35.2941176470588, Blast_Score=191, Evalue=6e-49,
Organism=Caenorhabditis elegans, GI17509811, Length=399, Percent_Identity=32.5814536340852, Blast_Score=186, Evalue=3e-47,
Organism=Caenorhabditis elegans, GI71999646, Length=377, Percent_Identity=32.0954907161804, Blast_Score=184, Evalue=6e-47,
Organism=Caenorhabditis elegans, GI71999644, Length=377, Percent_Identity=32.0954907161804, Blast_Score=183, Evalue=1e-46,
Organism=Caenorhabditis elegans, GI17507877, Length=386, Percent_Identity=33.419689119171, Blast_Score=182, Evalue=3e-46,
Organism=Caenorhabditis elegans, GI17507879, Length=385, Percent_Identity=32.2077922077922, Blast_Score=177, Evalue=7e-45,
Organism=Caenorhabditis elegans, GI17507881, Length=376, Percent_Identity=32.7127659574468, Blast_Score=177, Evalue=1e-44,
Organism=Caenorhabditis elegans, GI115532548, Length=429, Percent_Identity=29.3706293706294, Blast_Score=173, Evalue=2e-43,
Organism=Caenorhabditis elegans, GI115532546, Length=389, Percent_Identity=30.3341902313625, Blast_Score=170, Evalue=1e-42,
Organism=Caenorhabditis elegans, GI193208216, Length=374, Percent_Identity=32.0855614973262, Blast_Score=170, Evalue=1e-42,
Organism=Caenorhabditis elegans, GI71982858, Length=357, Percent_Identity=32.4929971988796, Blast_Score=169, Evalue=3e-42,
Organism=Caenorhabditis elegans, GI71990816, Length=373, Percent_Identity=33.7801608579088, Blast_Score=167, Evalue=1e-41,
Organism=Caenorhabditis elegans, GI17552114, Length=363, Percent_Identity=29.7520661157025, Blast_Score=162, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI17536099, Length=385, Percent_Identity=34.2857142857143, Blast_Score=161, Evalue=7e-40,
Organism=Caenorhabditis elegans, GI17536101, Length=385, Percent_Identity=34.2857142857143, Blast_Score=160, Evalue=1e-39,
Organism=Caenorhabditis elegans, GI17536103, Length=385, Percent_Identity=34.2857142857143, Blast_Score=160, Evalue=2e-39,
Organism=Caenorhabditis elegans, GI17505370, Length=348, Percent_Identity=33.6206896551724, Blast_Score=155, Evalue=5e-38,
Organism=Caenorhabditis elegans, GI17508543, Length=386, Percent_Identity=27.2020725388601, Blast_Score=152, Evalue=3e-37,
Organism=Caenorhabditis elegans, GI17507641, Length=383, Percent_Identity=30.5483028720627, Blast_Score=149, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI193206561, Length=396, Percent_Identity=28.030303030303, Blast_Score=147, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI32564046, Length=374, Percent_Identity=29.6791443850267, Blast_Score=138, Evalue=6e-33,
Organism=Caenorhabditis elegans, GI17556951, Length=363, Percent_Identity=28.6501377410468, Blast_Score=124, Evalue=8e-29,
Organism=Caenorhabditis elegans, GI25148203, Length=395, Percent_Identity=24.0506329113924, Blast_Score=117, Evalue=8e-27,
Organism=Caenorhabditis elegans, GI17553716, Length=355, Percent_Identity=27.887323943662, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI71997889, Length=374, Percent_Identity=28.8770053475936, Blast_Score=114, Evalue=7e-26,
Organism=Caenorhabditis elegans, GI25148291, Length=330, Percent_Identity=26.3636363636364, Blast_Score=104, Evalue=7e-23,
Organism=Caenorhabditis elegans, GI71982862, Length=217, Percent_Identity=31.7972350230415, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI71987152, Length=92, Percent_Identity=43.4782608695652, Blast_Score=82, Evalue=5e-16,
Organism=Saccharomyces cerevisiae, GI6324778, Length=427, Percent_Identity=36.5339578454333, Blast_Score=239, Evalue=9e-64,
Organism=Saccharomyces cerevisiae, GI6325138, Length=453, Percent_Identity=34.6578366445916, Blast_Score=236, Evalue=5e-63,
Organism=Saccharomyces cerevisiae, GI6324217, Length=370, Percent_Identity=37.8378378378378, Blast_Score=224, Evalue=2e-59,
Organism=Saccharomyces cerevisiae, GI6321360, Length=369, Percent_Identity=38.4823848238482, Blast_Score=217, Evalue=2e-57,
Organism=Saccharomyces cerevisiae, GI6323021, Length=364, Percent_Identity=32.967032967033, Blast_Score=207, Evalue=3e-54,
Organism=Saccharomyces cerevisiae, GI6320173, Length=434, Percent_Identity=29.9539170506912, Blast_Score=197, Evalue=3e-51,
Organism=Saccharomyces cerevisiae, GI6321856, Length=386, Percent_Identity=34.7150259067358, Blast_Score=193, Evalue=4e-50,
Organism=Saccharomyces cerevisiae, GI6320041, Length=369, Percent_Identity=32.520325203252, Blast_Score=192, Evalue=7e-50,
Organism=Saccharomyces cerevisiae, GI6324620, Length=378, Percent_Identity=34.1269841269841, Blast_Score=187, Evalue=3e-48,
Organism=Saccharomyces cerevisiae, GI6323947, Length=355, Percent_Identity=33.8028169014084, Blast_Score=184, Evalue=3e-47,
Organism=Saccharomyces cerevisiae, GI6320224, Length=385, Percent_Identity=31.1688311688312, Blast_Score=177, Evalue=3e-45,
Organism=Saccharomyces cerevisiae, GI6320449, Length=358, Percent_Identity=32.6815642458101, Blast_Score=171, Evalue=3e-43,
Organism=Saccharomyces cerevisiae, GI6322912, Length=337, Percent_Identity=33.2344213649852, Blast_Score=164, Evalue=2e-41,
Organism=Saccharomyces cerevisiae, GI6322323, Length=337, Percent_Identity=33.2344213649852, Blast_Score=164, Evalue=2e-41,
Organism=Saccharomyces cerevisiae, GI6322427, Length=358, Percent_Identity=31.5642458100559, Blast_Score=164, Evalue=3e-41,
Organism=Saccharomyces cerevisiae, GI6319714, Length=364, Percent_Identity=31.5934065934066, Blast_Score=160, Evalue=5e-40,
Organism=Saccharomyces cerevisiae, GI6320119, Length=356, Percent_Identity=30.8988764044944, Blast_Score=158, Evalue=1e-39,
Organism=Saccharomyces cerevisiae, GI6321111, Length=367, Percent_Identity=30.2452316076294, Blast_Score=155, Evalue=1e-38,
Organism=Saccharomyces cerevisiae, GI6321963, Length=379, Percent_Identity=30.3430079155673, Blast_Score=154, Evalue=2e-38,
Organism=Saccharomyces cerevisiae, GI6321267, Length=389, Percent_Identity=31.3624678663239, Blast_Score=149, Evalue=9e-37,
Organism=Saccharomyces cerevisiae, GI6320400, Length=368, Percent_Identity=31.25, Blast_Score=142, Evalue=1e-34,
Organism=Saccharomyces cerevisiae, GI6319618, Length=416, Percent_Identity=27.8846153846154, Blast_Score=131, Evalue=2e-31,
Organism=Saccharomyces cerevisiae, GI6323306, Length=422, Percent_Identity=26.0663507109005, Blast_Score=123, Evalue=7e-29,
Organism=Saccharomyces cerevisiae, GI6322876, Length=434, Percent_Identity=28.5714285714286, Blast_Score=120, Evalue=4e-28,
Organism=Saccharomyces cerevisiae, GI6324366, Length=417, Percent_Identity=26.6187050359712, Blast_Score=111, Evalue=3e-25,
Organism=Saccharomyces cerevisiae, GI6321374, Length=403, Percent_Identity=26.0545905707196, Blast_Score=97, Evalue=6e-21,
Organism=Drosophila melanogaster, GI24584399, Length=376, Percent_Identity=34.3085106382979, Blast_Score=230, Evalue=2e-60,
Organism=Drosophila melanogaster, GI28574962, Length=356, Percent_Identity=38.4831460674157, Blast_Score=224, Evalue=9e-59,
Organism=Drosophila melanogaster, GI21356161, Length=357, Percent_Identity=37.5350140056022, Blast_Score=220, Evalue=1e-57,
Organism=Drosophila melanogaster, GI17985987, Length=370, Percent_Identity=36.7567567567568, Blast_Score=218, Evalue=6e-57,
Organism=Drosophila melanogaster, GI24662330, Length=355, Percent_Identity=36.3380281690141, Blast_Score=217, Evalue=1e-56,
Organism=Drosophila melanogaster, GI21355075, Length=364, Percent_Identity=39.2857142857143, Blast_Score=217, Evalue=1e-56,
Organism=Drosophila melanogaster, GI24644483, Length=372, Percent_Identity=35.2150537634409, Blast_Score=212, Evalue=4e-55,
Organism=Drosophila melanogaster, GI24644479, Length=372, Percent_Identity=35.2150537634409, Blast_Score=212, Evalue=4e-55,
Organism=Drosophila melanogaster, GI281361218, Length=372, Percent_Identity=35.2150537634409, Blast_Score=212, Evalue=5e-55,
Organism=Drosophila melanogaster, GI24644481, Length=372, Percent_Identity=35.2150537634409, Blast_Score=212, Evalue=5e-55,
Organism=Drosophila melanogaster, GI24644487, Length=372, Percent_Identity=35.2150537634409, Blast_Score=211, Evalue=6e-55,
Organism=Drosophila melanogaster, GI45551833, Length=372, Percent_Identity=35.2150537634409, Blast_Score=211, Evalue=6e-55,
Organism=Drosophila melanogaster, GI24644485, Length=372, Percent_Identity=35.2150537634409, Blast_Score=211, Evalue=6e-55,
Organism=Drosophila melanogaster, GI17977678, Length=356, Percent_Identity=35.3932584269663, Blast_Score=205, Evalue=5e-53,
Organism=Drosophila melanogaster, GI18857967, Length=363, Percent_Identity=34.9862258953168, Blast_Score=204, Evalue=1e-52,
Organism=Drosophila melanogaster, GI24642151, Length=367, Percent_Identity=35.149863760218, Blast_Score=202, Evalue=3e-52,
Organism=Drosophila melanogaster, GI24584994, Length=369, Percent_Identity=34.1463414634146, Blast_Score=201, Evalue=8e-52,
Organism=Drosophila melanogaster, GI24585582, Length=389, Percent_Identity=33.9331619537275, Blast_Score=196, Evalue=3e-50,
Organism=Drosophila melanogaster, GI24645031, Length=370, Percent_Identity=32.972972972973, Blast_Score=184, Evalue=1e-46,
Organism=Drosophila melanogaster, GI28575014, Length=382, Percent_Identity=30.8900523560209, Blast_Score=182, Evalue=3e-46,
Organism=Drosophila melanogaster, GI281365720, Length=317, Percent_Identity=36.9085173501577, Blast_Score=180, Evalue=1e-45,
Organism=Drosophila melanogaster, GI24583281, Length=381, Percent_Identity=29.9212598425197, Blast_Score=170, Evalue=2e-42,
Organism=Drosophila melanogaster, GI24666101, Length=366, Percent_Identity=31.1475409836066, Blast_Score=170, Evalue=2e-42,
Organism=Drosophila melanogaster, GI24583279, Length=382, Percent_Identity=29.8429319371728, Blast_Score=170, Evalue=2e-42,
Organism=Drosophila melanogaster, GI24581954, Length=358, Percent_Identity=32.9608938547486, Blast_Score=164, Evalue=7e-41,
Organism=Drosophila melanogaster, GI24581952, Length=358, Percent_Identity=32.9608938547486, Blast_Score=164, Evalue=7e-41,
Organism=Drosophila melanogaster, GI24581956, Length=358, Percent_Identity=32.9608938547486, Blast_Score=164, Evalue=7e-41,
Organism=Drosophila melanogaster, GI28571808, Length=358, Percent_Identity=32.6815642458101, Blast_Score=164, Evalue=1e-40,
Organism=Drosophila melanogaster, GI28571809, Length=358, Percent_Identity=32.6815642458101, Blast_Score=164, Evalue=1e-40,
Organism=Drosophila melanogaster, GI24582080, Length=345, Percent_Identity=32.463768115942, Blast_Score=164, Evalue=1e-40,
Organism=Drosophila melanogaster, GI24582078, Length=345, Percent_Identity=32.463768115942, Blast_Score=164, Evalue=1e-40,
Organism=Drosophila melanogaster, GI17136248, Length=345, Percent_Identity=32.463768115942, Blast_Score=164, Evalue=1e-40,
Organism=Drosophila melanogaster, GI24582075, Length=345, Percent_Identity=32.463768115942, Blast_Score=164, Evalue=1e-40,
Organism=Drosophila melanogaster, GI24642822, Length=386, Percent_Identity=30.3108808290155, Blast_Score=159, Evalue=4e-39,
Organism=Drosophila melanogaster, GI17136814, Length=362, Percent_Identity=32.3204419889503, Blast_Score=159, Evalue=5e-39,
Organism=Drosophila melanogaster, GI19920478, Length=347, Percent_Identity=31.700288184438, Blast_Score=153, Evalue=2e-37,
Organism=Drosophila melanogaster, GI24643725, Length=390, Percent_Identity=28.7179487179487, Blast_Score=153, Evalue=2e-37,
Organism=Drosophila melanogaster, GI17647335, Length=369, Percent_Identity=30.3523035230352, Blast_Score=153, Evalue=2e-37,
Organism=Drosophila melanogaster, GI21355559, Length=377, Percent_Identity=31.0344827586207, Blast_Score=152, Evalue=3e-37,
Organism=Drosophila melanogaster, GI20130173, Length=426, Percent_Identity=29.81220657277, Blast_Score=151, Evalue=6e-37,
Organism=Drosophila melanogaster, GI24668515, Length=328, Percent_Identity=30.7926829268293, Blast_Score=120, Evalue=1e-27,
Organism=Drosophila melanogaster, GI18859659, Length=232, Percent_Identity=32.7586206896552, Blast_Score=109, Evalue=4e-24,
Organism=Drosophila melanogaster, GI28571338, Length=232, Percent_Identity=32.7586206896552, Blast_Score=109, Evalue=4e-24,
Organism=Drosophila melanogaster, GI17136666, Length=423, Percent_Identity=27.8959810874704, Blast_Score=106, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24640164, Length=375, Percent_Identity=24.8, Blast_Score=103, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 47879; Mature: 47748

Theoretical pI: Translated: 7.98; Mature: 7.98

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKTHLTEQKFSDFALHPLVLEALEKKGFQHCTPIQALALPLTLSGRDVAGQAQTGTGKT
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHEEEEEECCCCCCCCCCCCCCCH
LAFLTSTFHYLLSHPAKQDRKINQPRALIMAPTRELAVQIHSDAEALSQSTGLKMGLAYG
HHHHHHHHHHHHCCCCHHCCCCCCCCEEEEECCHHHEEEECCCHHHHHHHCCCEEEEEEC
GDGYDKQLKVLESGVDILVGTTGRLIDYAKQNYIDLGAIQVVVLDEADRMYDLGFIKDIR
CCCHHHHHHHHHCCCCEEEECCHHHHHHHHHCCEEECEEEEEEECCCCCHHHHHHHHHHH
WLFRRMPAVDQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCC
EEKMRLLQTLIEEEWPDRCIIFANTKHRCEDVWGHLAADGHRVGLLTGDVAQKKRLRILD
HHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHH
DFTKGNLDILVATDVAARGLHIPLVTHVFNYDLPDDCEDYVHRIGRTGRAGESGHSISLA
HCCCCCEEEEEEECHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEE
CEEYALNLPAIETYTGHSIPVSKYNSDALLSDLPAPKRLARPRGGNGPRRNSAPRRGGAP
EHHHHCCCCCEEECCCCCCCCCCCCCCHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCC
RNNRKRSG
CCCCCCCC
>Mature Secondary Structure 
SKTHLTEQKFSDFALHPLVLEALEKKGFQHCTPIQALALPLTLSGRDVAGQAQTGTGKT
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHEEEEEECCCCCCCCCCCCCCCH
LAFLTSTFHYLLSHPAKQDRKINQPRALIMAPTRELAVQIHSDAEALSQSTGLKMGLAYG
HHHHHHHHHHHHCCCCHHCCCCCCCCEEEEECCHHHEEEECCCHHHHHHHCCCEEEEEEC
GDGYDKQLKVLESGVDILVGTTGRLIDYAKQNYIDLGAIQVVVLDEADRMYDLGFIKDIR
CCCHHHHHHHHHCCCCEEEECCHHHHHHHHHCCEEECEEEEEEECCCCCHHHHHHHHHHH
WLFRRMPAVDQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCC
EEKMRLLQTLIEEEWPDRCIIFANTKHRCEDVWGHLAADGHRVGLLTGDVAQKKRLRILD
HHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHH
DFTKGNLDILVATDVAARGLHIPLVTHVFNYDLPDDCEDYVHRIGRTGRAGESGHSISLA
HCCCCCEEEEEEECHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEE
CEEYALNLPAIETYTGHSIPVSKYNSDALLSDLPAPKRLARPRGGNGPRRNSAPRRGGAP
EHHHHCCCCCEEECCCCCCCCCCCCCCHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCC
RNNRKRSG
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA