Definition Shewanella sediminis HAW-EB3, complete genome.
Accession NC_009831
Length 5,517,674

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 157376870

GI number:

Start: 4546732

End: 4549584

Strand: Reverse

Name: Not Available

Synonym: Ssed_3738

Alternate gene names: NA

Gene position: NA

Preceding gene: 157376873

Following gene: 157376869

Centisome position: NA

GC content: NA

Gene sequence:

>2853_bases
ATGATGAGCGCCTCCAGCCTTCTGCTGGTGATATTTTCCTATGTGGCCCTGCTGTATATGCTGGCGTCATGGGCCGAGTC
CGGCAGTGAACGGGCCAGGAAGCTGACAACCAGTGCCGCAGTTTATGCGCTGTCACTCGCCATCTTTTGTACCAGTTGGA
CCTTCTTTGGTAGTGTCGGTTTCGCTACCCGTTCCAGCATATTGATGCTCTCTATCTATCTTGGGCCGACACTCTTGATG
ATCGTTATCTGGCCCTTGATGCAGCGAGTGTTGCTGATAAAACAGATCTACAGGGTTACCAGCATCGCCGACTTCCTTTC
GGCCCGATTCAACCGCAGTATCTTCCTTGCCGGCCTCGCCGCGACCGTCGCCATGGTGGGGATCGTTCCCTATCTGGCGC
TGCAACTCAAAGCGATAAACACCGCCATCGATCTCGTCCTGGAGACCGAAGACGGTGTTGCGGCCAATGAGATTGCCTGG
CTGGTCTGGTTGGGCGTCGCCCTGTTTACCATTATCTTCGGTATTCGACATCTGGATCCCACCGAGAGGCACCCGGGCAT
GATGCTGGCGCTCGCTGTCGAGGGAATGGTTAAATTGCTGGCCATGCTGTCTGTGGGGGTGTTTGTCGGTTTTGTGATGT
TTGATTCTCCACTGGTCATCCTCGAGCTGCTTGAACAGAAGATGCCCGAGGCGGCTCAGGGGATGTCATCCAAGCCCGAG
TTTGTCACCTGGGTCAGTTATCTGCTGCTCGCAGGTTCCGCCTTTATGTTACTGCCACGCCAGTTTCATGTCATGGTGGT
TGAAAATCCCGATGTGAAACATATTAAGAAGGTGCAGTGGTGGCTGCCCATCTATCTGATATTAATGACTATTTTTATCA
CGCCTATAGCCGCTGCGGGTATGTTACTGCTTGGTCCGGAAACGGCGGATAGTTATATGCTATCCCTGCCTATGCTTGCC
GGGCAGGATCTGCTCACCCTATTCGTATTTATCGGCGGTTTCTCTGCCTCTATGGCCATGTTGATGGTGTCCGGCATGAC
GCTCTCCACCATGTTCAGTAACCATTTAGTCCTGCCTCTGCTGCAGTGGAGTAATCCGGGTAGCGGCTTGAAAAGGTACC
TGCTTCAGTCCAGGTGGCTGGCGGTGTTTATTGTGCTGGGGGCGGGACAGATGTTCTACCTCTATCTGGGTGAGTCATAC
ATGTTAGTGAACATGGGCATGATCTCCTTCGCCGCCGTATTGCAATTTCTCCCCTTAGTGATTGCCGGACTCTATTGGCC
TAAGGTCACCGCAAAGGGGGCCTCTGCGGGCTTGATGGTGGGCTTTATTGTGTGGGCATACTGCCTGCTACTGCCCGCGA
TAATGAAGAGTGGCTGGATAGATGCGGATATTCTTGAGTTAGGGCCATGGGGACTCTATTGGTTGCACCCCGAACACCTG
ATGGGCACCGAGATGGATAAGATAAGCCACGGGGCATTGTGGTCTCTGGCGGGAAACGTCACAGCCTTGGTCTTTGGCAG
CCTGTTCTCGAAGGTGACGGGAGAGGAGCAGAGATATAACGCCGAGTTTATGGATGTTATGGCTGAGCGCGTCGCCGAAG
ACGAGGCGATTATGGATACCTTGCCCCGTAATATTGAGCTCAAACCTAAGTTGAAGTTACTGAAGGGAATATTTGGGCAG
TACCTACCTGCCGAACAGGCTGAAGTTAAAGTGAAAGCCTGTTTAGTCGAGGCTGAGCTCAATGATGATGAGCTGATTAA
TGTGCAGGAGCTGGCCTATCTGGAGAGGGCGACAGAGAGATTGCTCAGCGGTATCACCGGAGCCGCGGTGGCTCATATGG
TGGTCACTCAATCAAACATCTATTCAGAGAAAGAGAGTATGACTCTGGAGCGCTATTATGCCCAGTTGCTGGCTCAGTTG
AAGATCAGTCCCGCTCAACTGCGGCAGCAACTGAACTACTCGAAAGAGAAGGAGCAGTTTGCTCAGCGATACTCAGAGCA
GATGGAAAAACTGGTGGAGGAGAGAACCCGTGAGCTTCGCTCGACGCTGGATCAACTTAAGAGTGCTCAGCATAAACTGG
TTGAGACGGAGAAACAGGCGTCGTTAGGTAAGATGGTGGCGGGCATTGCCCATGAGATCAATACCCCAATCGGTGTCTGT
GTCACCGCGGCGTCCCACCTTCATGATGAGGTGATCGAGGTCAAGAAGATGTTCTCAGATGGTGAGCTCAGTGAAGATGA
ATTTGCAGGTTTTATGCAAACCTGCATCGAAGCCATGGATATTATTCTTAAGAATAATGCCCGAGCCTCTAAGTTAATTC
AGAGCTTCAAGCGGGTTGCGGTCGATCAATCCAGTGAGGAGTTGCGGGAGTTCGAGCTCAATGAGTATCTCGAAGAGATA
TTGATGTCGCTCAGGCCGACACTCAAGAAGGTGCCCCATGAGATAAAGATCGACTGTGACTTCAGCTTAAGCTGTAACAC
CTATCCCGGTGTCCTGTCTCAGGTTATAACTAATCTGATCATGAATAGCCTGCTGCATGCATTTCTCCCGGAGCAGGTGG
GAGAGATCATCATAACCGTAAAAATCAGAGATGATTGGGTATTACTGGATTATCGCGATGATGGTATCGGACTCGATGAA
GAGGGAGTGAAGAGTCTGTTCGACCCTTTCTATACGACAAAGCGTAATCAGGGGGGCAGCGGTTTGGGGACCCATCTTGT
GTACAATTTGGTCACGCAAAAACTCAGGGGCGAAGTTGAGATTGAGACCTCACCCAATCAGGGACTCTGTTATCACATAC
GTTTCCCAAGGAACCTACAGAAGCTTGAGCGGGATCTGGGTGAGCATATTTAG

Upstream 100 bases:

>100_bases
TTTAGTCAGTGAACAACGTTGACAGTCAGCCCCTCGTCCCGTTTATTGTAAGTTGCAGACCTGCATCTTCTGCATATAAC
GCTATAGGCGGGAGTAGCTT

Downstream 100 bases:

>100_bases
CCGTGAGTGGTTTGTGGCTTTCAATGGAGGCCTGGGGAGAGGTTGGGGGTGGTGATAGGTAAAGCTATTCTCTCCGCCTC
GAAAAGACGGTATAAATAGG

Product: Na+/proline symporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>950_residues
MMSASSLLLVIFSYVALLYMLASWAESGSERARKLTTSAAVYALSLAIFCTSWTFFGSVGFATRSSILMLSIYLGPTLLM
IVIWPLMQRVLLIKQIYRVTSIADFLSARFNRSIFLAGLAATVAMVGIVPYLALQLKAINTAIDLVLETEDGVAANEIAW
LVWLGVALFTIIFGIRHLDPTERHPGMMLALAVEGMVKLLAMLSVGVFVGFVMFDSPLVILELLEQKMPEAAQGMSSKPE
FVTWVSYLLLAGSAFMLLPRQFHVMVVENPDVKHIKKVQWWLPIYLILMTIFITPIAAAGMLLLGPETADSYMLSLPMLA
GQDLLTLFVFIGGFSASMAMLMVSGMTLSTMFSNHLVLPLLQWSNPGSGLKRYLLQSRWLAVFIVLGAGQMFYLYLGESY
MLVNMGMISFAAVLQFLPLVIAGLYWPKVTAKGASAGLMVGFIVWAYCLLLPAIMKSGWIDADILELGPWGLYWLHPEHL
MGTEMDKISHGALWSLAGNVTALVFGSLFSKVTGEEQRYNAEFMDVMAERVAEDEAIMDTLPRNIELKPKLKLLKGIFGQ
YLPAEQAEVKVKACLVEAELNDDELINVQELAYLERATERLLSGITGAAVAHMVVTQSNIYSEKESMTLERYYAQLLAQL
KISPAQLRQQLNYSKEKEQFAQRYSEQMEKLVEERTRELRSTLDQLKSAQHKLVETEKQASLGKMVAGIAHEINTPIGVC
VTAASHLHDEVIEVKKMFSDGELSEDEFAGFMQTCIEAMDIILKNNARASKLIQSFKRVAVDQSSEELREFELNEYLEEI
LMSLRPTLKKVPHEIKIDCDFSLSCNTYPGVLSQVITNLIMNSLLHAFLPEQVGEIIITVKIRDDWVLLDYRDDGIGLDE
EGVKSLFDPFYTTKRNQGGSGLGTHLVYNLVTQKLRGEVEIETSPNQGLCYHIRFPRNLQKLERDLGEHI

Sequences:
NA

Specific function: NA

COG id: COG0591

COG function: function code ER; Na+/proline symporter

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA