Definition Shewanella sediminis HAW-EB3, complete genome.
Accession NC_009831
Length 5,517,674

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Identifier: 157376343

GI number:

Start: 3890171

End: 3892357

Strand: Reverse

Name: Not Available

Synonym: Ssed_3211

Alternate gene names: NA

Gene position: NA

Preceding gene: 157376344

Following gene: 157376342

Centisome position: NA

GC content: NA

Gene sequence:

>2187_bases
ATGGAAATCAAAGTTAATTTTCTCGACAATCTTAGACTGGAAGCGAAGTTTGACGATTTTACCGTCACCGCCGATCAGCC
TATTCGTTACAAAGGCGATGGCTCAGCACCCAGCCCTTTTGATTATTTCTTAGCGTCATCAGCACTTTGTGCGGCCTACT
TTATCAAGGTGTACTGTAAGGCGCGTGATATTCCAACGGAAAACATCAGACTGTCACAAAACAACATTGTTGACCCGGAA
GATCGTTATAACCAGATTTTCCAAATTCAGGTAGAACTGCCTGATGATATTTCAGAGAAAGATAGAGTCGGTATTTTACG
TTCGATAGAGCGTTGTACCGTTAAAAAGGTGGTACAGACAGGCCCTGAATTTAAGATTGAAACGGTTGAAAACCTCGAAT
CAGATGCCAATGCGATGTTGATGGGGCAACCCGATGGCGATGTCAGTACCTACATCTTGGGTAAAGATCTGCCGCTTGAG
CAAACCATCTCTAACATGACGGGCATGTTAGCCGATCTGGGAATGAAGATAGAGATATCTTCGTGGCGCAACATTGTCCC
TAATGTGTGGTCGTTACATATTCGCGATGCGGCATCACCTTCGTGTTTTACTAATGGTAAAGGTGCCACTAAAGAAAGTG
CGCTTTGCTCGGCACTCGGTGAGTTTATCGAACGCTTAAACTGCAACTTTTTCTATAACGATCAATTTTTCGGTGAAGAG
ATTGCCAACAGTGAATTTGTTCATTACCCCAATGAAAAGTGGTTTGAGCTAGAAGACGACGATGCATTGCCGGCGGGGAT
CTTAGATGAGCATTGTTTAGACATTTACAACCCAGATGGTGAACTGGCGGGTTCTAATCTTATCGATACCAACTCAGGCA
TGGTCGAACGTGGCATCTGTACCATTCCCTATGTTCGCCATAGCGATGGTGAAACGGTACATTTTCCGTCTAACTTAATC
GAAAACCTGTTCCTGAGTAACGGCATGAGTGCGGGTAACAACCTGCAAGAAGCCAAGGTGCAGTGTTTATCAGAAATTTT
TGAGCGCGCCGTTAAAAGACAAATTATTGAACAAGAAATTGTCTTGCCTGATGTACCGATGCAAGTGTTAGAGAAGTACC
CGAGTATCCTGGCCGGTATTCAAGGCCTGGAAGCACAGGGTTTCCCAGTTGTCGTTAAAGACGCCTCGCTTGGTGGTCAA
TTCCCGGTTATGTGTGTCACGCTGATGAACCCAAGAACGGGTGGGGTATTTGCCTCTTTTGGTGCGCACCCAAGCTTTGA
AGTGGCGTTAGAGCGAAGCTTGACTGAGCTATTGCAGGGTCGCAGCTTTGAAGGCTTAAACGACGTGCCTAAACCTACTT
TCGACAGCATGACGGTGACTGAGCCTGAAAACTTTGTCGAGCACTTTATCGATTCTACCGGTGTTATCTCTTGGCGCTTC
TTCAGTAGCAATCATGACTATGATTTTTGCGAATGGGATTTCTCCGGCACTAACGCAGAAGAGTCTGAAAGCTTATTTGG
CATATTAGCCGATATTGGCAAAGAGGCTTATATTGCCGAATTTGATCAGCTCGGTGCCTCGGTGTGCCGTATTTTGGTAC
CTGATTACTCTGAAGTGTATCCGGTTGAAGATCTGATTTGGGATAACACCAATAAATCGCTCGATTATCGTGAAGATATC
TTAAATCTTCATTCACTCAATGATGATGAGTTAGCTGGTTTGGTCGAGCGTCTAGAAGAGAGTCAATTAGATAACCAAAC
TGACATTCCAACATTGATTGGTATTGTATTTGATGAAAATACCCCATGGGGTCAGTTGACGATTATTGAGCTTAAGATAC
TTATCTATCTTGCATCGGGCGAGCTTGAAAATGCCATTGAGCTTGTGGGTGAGTTCCTGCAGTACAATGACAATACAGTT
GAACGTGGTTTGTTCTATCAGGCAGTCAATGCGGTGTTAGAAGTCACCTTAGATGAAGAGTTAGAACTTGAGCACTTTAT
TCATAATTTCGAAAGAATGTTTGGTAAAGAGACCATGGATAACGTGGTTGGCTCAGTGACCGGTGAGGTGAAGTTCTTCG
GGCTGACTCAAACCAGCATGAAGCTTGAGGGCATAGAGCCACACCTGAGACTTATTGAAAGTTACAAGAAATTGCATCAA
GCTCGTAAAGCCAAAGCGGTGAGTTAA

Upstream 100 bases:

>100_bases
TACGTAATTAACCCAAGACTATTGCCTAAAAAACACCGATAATCCCCCCATTAGTAGGCAGGCCCGCCGATTTACAGCGC
ACGACTCTGGACAATATTCA

Downstream 100 bases:

>100_bases
TCTCAGCAATTTGCATTCAATTTGTATTCAAGTTGTATTAGTTTGATACAGATAACAAGCCCGTCAATTGATGGGCTTTT
TATTACCTCCATTTTATAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>728_residues
MEIKVNFLDNLRLEAKFDDFTVTADQPIRYKGDGSAPSPFDYFLASSALCAAYFIKVYCKARDIPTENIRLSQNNIVDPE
DRYNQIFQIQVELPDDISEKDRVGILRSIERCTVKKVVQTGPEFKIETVENLESDANAMLMGQPDGDVSTYILGKDLPLE
QTISNMTGMLADLGMKIEISSWRNIVPNVWSLHIRDAASPSCFTNGKGATKESALCSALGEFIERLNCNFFYNDQFFGEE
IANSEFVHYPNEKWFELEDDDALPAGILDEHCLDIYNPDGELAGSNLIDTNSGMVERGICTIPYVRHSDGETVHFPSNLI
ENLFLSNGMSAGNNLQEAKVQCLSEIFERAVKRQIIEQEIVLPDVPMQVLEKYPSILAGIQGLEAQGFPVVVKDASLGGQ
FPVMCVTLMNPRTGGVFASFGAHPSFEVALERSLTELLQGRSFEGLNDVPKPTFDSMTVTEPENFVEHFIDSTGVISWRF
FSSNHDYDFCEWDFSGTNAEESESLFGILADIGKEAYIAEFDQLGASVCRILVPDYSEVYPVEDLIWDNTNKSLDYREDI
LNLHSLNDDELAGLVERLEESQLDNQTDIPTLIGIVFDENTPWGQLTIIELKILIYLASGELENAIELVGEFLQYNDNTV
ERGLFYQAVNAVLEVTLDEELELEHFIHNFERMFGKETMDNVVGSVTGEVKFFGLTQTSMKLEGIEPHLRLIESYKKLHQ
ARKAKAVS

Sequences:
NA

Specific function: NA

COG id: COG1944

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA