Definition Shewanella sediminis HAW-EB3, complete genome.
Accession NC_009831
Length 5,517,674

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Identifier: 157376164

GI number:

Start: 3663288

End: 3666056

Strand: Reverse

Name: Not Available

Synonym: Ssed_3032

Alternate gene names: NA

Gene position: NA

Preceding gene: 157376165

Following gene: 157376163

Centisome position: NA

GC content: NA

Gene sequence:

>2769_bases
GTGTTACTAAAAGTAAAAAAACTCATTATAGTAAGCATAGGTGTTATATGTTTAGCAAGTGGGGCGGTTCAGGCTGTTAC
CCCTTCACCGCAAATGATCGAGCAATTCAAGACCTTACCTAAGGCAGAGCAAGAAAGGCTTGCCAAGCAATATGGGCTCG
ATCCATCAATGCTAAATGCTGACTCTACCACTACTCAAGAAGGGTTTGAAAATCAGTCAATTATCAACCCAAGAGAAGTG
GAAGATGAAAAAGCGAAGGAGTTGAAAGAGCAGCAGATCATCGTAGATGAAGTCACTCAGTTCTTAAAAGATCAAAAAGA
TAAAGATACAAAAAAATTACAGCCATACGGTTATGACCTGTTTGAAGGTGAACCAATGACTTTCGCACCTGTATCGGATA
TTCCGGTACCGGGTGAGTACCTGGTTGGCCCTGGTGATAACATCAAGGTTCAGCTTTATGGTAAAGAGAATAAAGAGTAT
GACTTAGTCATCAGTCGTGACGGTAACATTCAGTTTCCTGAACTGGGTCCAATCTCAGTCTCTGGTTTGAAGTTTGAAGA
TCTGCGTAAGACGGTTTCGGCACGTATTAAGCAGCAGATGATCGGGGTAGAGACCAATATCACCATGGGTGAACTACGCT
CTATTCGCATCTTTATCGCCGGTGATGCCTATAAACCAGGTTCATATACCGTATCCAGTCTCTCTACAATTACTCAGGCA
CTATTTGTTGCCGGTGGTATTGCTGAAATTGGCTCGTTAAGAAACATCCAACTCAAGCGTAAAGGTAAGCTTTTAGGCAC
ATTAGACCTGTATGATTTGCTGATGCGGGGTGATGCATCGAACGACATGCGCCTGCGCTCAGGTGATGTGGTATTCATTC
CATCTGTTGGTGGGCTTGTCTCGGTCGACGGTGAAGTCCGACGCCCGGCTATCTACGAGCTTAAAGGTAAAGAGTCCATG
GGTGAGGTTATCGCCATGGCTGGTGGTCTCAAAGGCGCTGCCTATCCAAGAAGTAGTAGTATCGAGAGATACAATAAGCA
AGGTTTGAAAACGATTAAGAATGTCGATCTGACAGCCGATAAAGGCCGAGCTGTGATAGCCAAAGCTGGCGACATTGTTA
AAGTTAAAACGGCTACAACTCAATTCGAAGATGCGATTACCGTCCTTGGTGCAGTAATTCGTCCGGGTAAGTATCAGTGG
TATCAAGGTCAAAGGGTCAGCGATCTGCTACCATCAATCTGGGGCGATTTCCAGCCTTCTGCCGATCTCGATTATGCGAT
TATCATCAGAGAGATCAATAAGCACGGTGATATAGAGGTGCATCAATTTGCACCGTCGCAGGCGATTATCACCAAAGCGG
CTACAGAAGATTTAGAGCTCAGCCCACGTGACATAGTAATGGTGTTTAACTTCAGTGATGATGCACAGAATCGATTCGAA
CTCAATAAACTCGTTAGGGAAAGAGTCGAAAAAGTTGTACAACTTGTCGGTGACAGCTCTCTTTCGAAAGATCTATTCAA
AGCAGGTTTTTCCCAGTTAGAAAATCAAAAACTGCGCAACCGCAGCCAACTTGGTGGCGTGGTAGTAGCTAAAGAGCAGG
TAGAGGATGACGAAGCTTTAGCTATAAAAGGTGAAGTCAACAGGATGATGGCTAACCTGTTTGAAGATCCTGAACTCATC
AAACTCAGTGGTTTGATGAACCGTAGTGAACTGCTTTATCCAATCATCATGAAGCTAAATCATCAGAGCCGTTCGGGCGA
TGGTGTACAGGTAGTTGCCATTAAGGGGCAGGTCTACCACGAGGGTATGTATCCACTCGCAGTTAATGCCAGAATTTCAG
AGGCTGTTAAAGCGGCGGGAGGACTGAAAGAGGGCGCCTATACATCCAGAGCCGAACTGACTCGCACCGTCACCGTTGCA
GATGGTTCGAACATCACCCACCAAAATATCGAACTATTAGCGGCATTAAATGGTGAGCCTAGCTCAAACTTGACATTAAA
AGGCCGAGATATCCTGACTATCATGACCACGCCTGAGTGGCAGGAAAACAAGTCAGTCGAAATTCGTGGTGAGGTTCGCT
TCCCGGGTGTCTATAACATTCGCCGTGGTGAAACGCTTAAAGAAGTCGTTGAGCGAGCAGGTGGCTTTACTAACTTTGCT
TATCTTCCTTCATCGGTATTCGTTCGTGAATCGGTCCGTTTGCAGGAACAGCTGGAAATTAAAAAGTTAGCCGATCAGCT
TCGACGGGATATCGCTACTCGTGGTGTCTCTAAAGATGGTGATGTTGTGAATTACGCCGATGCCCAGTTGATGTTAACGG
ATCTCGAGAATATCGAAGCCGTTGGTCGTCTCGTTGTTGACCTTTCAGCCATCTCAATTGGCATCGAACAAGCTGATCTT
CAGTTGGAAGATTCTGATGTTCTTTACGTGCCATCAACCAAGCAAACTATAGCAGTAATGGGTGAAGTGCAGCACGCAGC
AACTCACAGATATAAACAAGGGTTAACACTGGATCAGTATCTGAATATGTCAGGTGGTGTGAGAGAGAGAGCCGACGATG
GCAGAACTTATGTTGTGAAAGCTAATGGCTCAGTGATGCTACCTAGCCGCTCAATGTGGTTTAGCAGTGAAGACCGTTTA
CAACCGGGTGACACCATTATTGTACCACTGGATACAGAATACAAAGATAATTTAACCCTTTGGACTCAGGTTACCAGTAT
CATCTATAATACAGCCGTTGCATTTGCTTCAATTTCTAATATTAAATAG

Upstream 100 bases:

>100_bases
GTTTAAGAAAGTGAATTCATAGGTTTGAATTTGCCGATTTATTTTTTAGCTAGTGCCTTTTTGTGGGCACCGATTTTTGG
TTTGATTCTCGGAGAGTGCG

Downstream 100 bases:

>100_bases
AAACTGTGGCCGTTATGTTTTGAGTTAATTGAGGGTTGTAAGTCTTTGATTAACTATTTTACAAACATGTAGTGCAAAAA
CAGGTACTGCTTGAAAGTTC

Product: polysaccharide export protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>922_residues
MLLKVKKLIIVSIGVICLASGAVQAVTPSPQMIEQFKTLPKAEQERLAKQYGLDPSMLNADSTTTQEGFENQSIINPREV
EDEKAKELKEQQIIVDEVTQFLKDQKDKDTKKLQPYGYDLFEGEPMTFAPVSDIPVPGEYLVGPGDNIKVQLYGKENKEY
DLVISRDGNIQFPELGPISVSGLKFEDLRKTVSARIKQQMIGVETNITMGELRSIRIFIAGDAYKPGSYTVSSLSTITQA
LFVAGGIAEIGSLRNIQLKRKGKLLGTLDLYDLLMRGDASNDMRLRSGDVVFIPSVGGLVSVDGEVRRPAIYELKGKESM
GEVIAMAGGLKGAAYPRSSSIERYNKQGLKTIKNVDLTADKGRAVIAKAGDIVKVKTATTQFEDAITVLGAVIRPGKYQW
YQGQRVSDLLPSIWGDFQPSADLDYAIIIREINKHGDIEVHQFAPSQAIITKAATEDLELSPRDIVMVFNFSDDAQNRFE
LNKLVRERVEKVVQLVGDSSLSKDLFKAGFSQLENQKLRNRSQLGGVVVAKEQVEDDEALAIKGEVNRMMANLFEDPELI
KLSGLMNRSELLYPIIMKLNHQSRSGDGVQVVAIKGQVYHEGMYPLAVNARISEAVKAAGGLKEGAYTSRAELTRTVTVA
DGSNITHQNIELLAALNGEPSSNLTLKGRDILTIMTTPEWQENKSVEIRGEVRFPGVYNIRRGETLKEVVERAGGFTNFA
YLPSSVFVRESVRLQEQLEIKKLADQLRRDIATRGVSKDGDVVNYADAQLMLTDLENIEAVGRLVVDLSAISIGIEQADL
QLEDSDVLYVPSTKQTIAVMGEVQHAATHRYKQGLTLDQYLNMSGGVRERADDGRTYVVKANGSVMLPSRSMWFSSEDRL
QPGDTIIVPLDTEYKDNLTLWTQVTSIIYNTAVAFASISNIK

Sequences:
NA

Specific function: NA

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA