| Definition | Shewanella sediminis HAW-EB3, complete genome. |
|---|---|
| Accession | NC_009831 |
| Length | 5,517,674 |
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Identifier: 157375831
GI number:
Start: 3257943
End: 3259733
Strand: Reverse
Name: Not Available
Synonym: Ssed_2696
Alternate gene names: NA
Gene position: NA
Preceding gene: 157375837
Following gene: 157375826
Centisome position: NA
GC content: NA
Gene sequence:
>1791_bases ATGCCGACATATCAAGCCCCACTTCGTGACTACCAGTTTGTATTAAATGAACTTCTTAATATCTATGAGCGTACAGAGCT CAAAGGTTTCGATGAAATTGATGTCGAACTTGCCGATGCTATCTTGCAAGGTGTAGCCGACTTCTCAACTGAAATTATGC TACCACTCAACAGCAGTGGTGATGTTGAAGGTTGCAAACTGGTCGATGGTAATGTCATTGCCCCTAAAGGATTTAAAGAA GCGTACCAACAATATGTCGATAATGGTTGGGGCACCTTGACCTGTGATCCTGAATATGGCGGTCAAGGTTTACCCGAGGC CATCGGGGTATTTGCGACCGAGATGAAAACCGCGACTAACATGGCCTTTGCCATGTATCCCGGACTCACCCATGGTGCCT ATGCGGCAATTCATGCCCATGGCAGTGATGCACTTAAACAGAAATACTTAGAGAAGCTGGTGACTGGTGAATGGACGGGT ACCATGAACCTGACTGAGTCTCATGCCGGAACCGATCTCGCTTTGCTACGCACTAAAGCAATCGAGGCTGGAGAGGGTCA ATATGCGATCTCCGGCGAGAAGATATTTATCTCATCGGGCGATCATGATCTGGCCGAAAACATTGCCCATCTGGTGCTGG CCCGATTACCCGATGCGCCGGCGGGTGTGAAGGGGATCTCTCTGTTTGTCGTGCCTAAGTTTTTAATCAATGAAGATGGC AGTCTGGGTGATGCCAATACTCTGTGTGCCACCGGACTCGAGCACAAGATGGGTATTCATGGTAACTCAACCTGCGTGAT GAACTTCGATGGTGCCCTCGGTGAGTTGGTGGGTGATCCGCATCAAGGTCTAAGGGCGATGTTCACCATGATGAACCAGG CGAGACTCGGCGTTGGGGTTCAAGGACTGGGCGTGTCAGAGATCGCATACCAAAATGCACTCGCCTATGCCAAAGACAGA ATTCAGGGACGGGGACTCAGTGGCGTTAAAGCGCCGGAGATGGCGGCGGATCCTATCTTAGTTCATGGTGATGTAAGGCG TATGTTGATGTCGCAAAAATCCTTCAATGAAGGGGCGAGAGCGATGATAGGTCAACAGGCGCTATGGCTCGATGAGGCCG AGCGTCACAGCGATCCGGAAAAAGCCAAAATGGCAAATAAGTTGGCCGCGTTATTTACACCGATAGTCAAAGGGTTTGTA ACCGATAGAGGCTTCAATGCCTGTGTCGATGCCCAGCAGGTATTTGGTGGTCATGGTTACATTCACGAGTGGGGCATGGA GCAATTTGTACGTGATATTCGTATCTCTATGCTCTATGAAGGCACTAATGGCGTACAGGCGCTGGATCTTGTCGGTCGAA AGATATTGTCCGACAAGGCTGCAACCTTGATGAGCTGGTCGGCTCTTGTGAAACAGCTTATCGAAGAGAACATGAGCAAT GACGCAATGAAGCCCTATCTTGCCGGTTTGATGGATGCGTCAAAGGATCTGGAAAAATCCACGCAATATGTCGCCATGAA TGCGCCGAAGAATTCGGATATTCTGGGGGCTGCATCTATGCCCTATATGCAAATTTTGGGGATCACAGCATTAGCCTGGA TGTGGACTCGCACGGCGTCGATAGCACTAGCGGCGCTGGAAACAGATACCGGCGACAGAGAGTTTTATCAGGGCAAACTG AAAACAGCCCAGTTCTATATGGGGTATTGGGCGGTACAGACTCGCAGTTTGCGTAAGCAGATAGAGTCGAGCAGTGAACA ACTGACCGAACTCGATGAGGCCGATTTTTAG
Upstream 100 bases:
>100_bases GACGCCTCTTGTAAAAATTACAATTTAAACGCATGATTGAAACCATCGTATGAAAGGTCAGAATATTTTCGTCTTAATAT AAAAATAAAAGGAACAGGGA
Downstream 100 bases:
>100_bases TTTCTTATACCGGCGTCTGGTTGGGTTTAGTTTGTTACATAAACGAATTAAGACGTTTAGACAATTTTAAGTGACAAGAA AAAAGAGAACAGAGCTGATT
Product: acyl-CoA dehydrogenase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>596_residues MPTYQAPLRDYQFVLNELLNIYERTELKGFDEIDVELADAILQGVADFSTEIMLPLNSSGDVEGCKLVDGNVIAPKGFKE AYQQYVDNGWGTLTCDPEYGGQGLPEAIGVFATEMKTATNMAFAMYPGLTHGAYAAIHAHGSDALKQKYLEKLVTGEWTG TMNLTESHAGTDLALLRTKAIEAGEGQYAISGEKIFISSGDHDLAENIAHLVLARLPDAPAGVKGISLFVVPKFLINEDG SLGDANTLCATGLEHKMGIHGNSTCVMNFDGALGELVGDPHQGLRAMFTMMNQARLGVGVQGLGVSEIAYQNALAYAKDR IQGRGLSGVKAPEMAADPILVHGDVRRMLMSQKSFNEGARAMIGQQALWLDEAERHSDPEKAKMANKLAALFTPIVKGFV TDRGFNACVDAQQVFGGHGYIHEWGMEQFVRDIRISMLYEGTNGVQALDLVGRKILSDKAATLMSWSALVKQLIEENMSN DAMKPYLAGLMDASKDLEKSTQYVAMNAPKNSDILGAASMPYMQILGITALAWMWTRTASIALAALETDTGDREFYQGKL KTAQFYMGYWAVQTRSLRKQIESSSEQLTELDEADF
Sequences:
NA
Specific function: NA
COG id: COG1960
COG function: function code I; Acyl-CoA dehydrogenases
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA