The gene/protein map for NC_000916 is currently unavailable.
Definition Shewanella sediminis HAW-EB3, complete genome.
Accession NC_009831
Length 5,517,674

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 157375810

GI number:

Start: 3232271

End: 3233404

Strand: Reverse

Name: Not Available

Synonym: Ssed_2675

Alternate gene names: NA

Gene position: NA

Preceding gene: 157375813

Following gene: 157375809

Centisome position: NA

GC content: NA

Gene sequence:

>1134_bases
ATGCCGGCCAGCGCCGATGACTTTGCCTCTTGTGTTATTAAACTTAAAGAGACCGCGCAAGCGCAAGGGCTATCGAGAGA
CACCATAGACAACACCTTGGCAAAGGTAAAATATATCTCTCGAGTTATCGAGTTAGATAAGAAACAGCCGGAGTTTAGCC
AAACGTTCGATAACTATTTCAGCAAAAGGGTGACCGACTGGCGCGTGAAGGAGGGGAGAAAGTTACTAAAAGAGAACCGA
GAACTCCTCAATGAATTATCACAGAAATACGGAGTACCGCCACAATATCTGATGGCGTTTTGGGGGCTGGAAACTAACTT
CGGCTCTTATAAAGGGAAAATGCCGGTACTCGACTCTTTAGCTACACTGGCCTGTGATCCTCGCCGTAGTAAATATTTCA
CCGGCGAATTGATGAAAGCCTTGAAGCTTAAAGAGGAGTATCAGTTTGAGTCCTCACAGATGGTTGGCTCATGGGCCGGT
GCTATGGGCCACACACAATTTATGCCTAGTGCTTATGCAAAATATGCCGTCGATGGAGATGGCGATGGTAAAGCCGACCT
TTGGAACAGCACCACAGACGCATTGACCTCAGCGGCAAACTTTTTAAATCAACTCGGCTGGCAACGTAATGAACGTTGGG
GCCGTGAAGTCAAACTGCCAAAGGATTTCAGTTATGGATACCTGGGTAAGGACAAGGCTCAACCTCTGGCCGAGTGGGCA
AAGCTTGGGGTGACTAAGAGTGATAAGACCTCTTTGTCTACACCGGATATGAACGCCGCACTCTATCTGCCAGCGGGGCA
TACCGGTCCGGCATTTCTTGGCTACAAGAACTTTGATGTGATCATGCGATGGAATCGTTCTGTGTATTACGCCATTGCGG
TTGGGCATCTGGCTGACAGAATCAATGGGGGGGTAAGTTTGGCCGTTAAGCCACCCAAGCAGGACAACTTAAGTCGAGCG
CGTGTCAAGTCGTTGCAGGCTAAGTTAAATGAGAAAGGGTTCGATGTAGGAAAGCCTGACGGCGTGATGGGCAGGAACTC
CAAAACCGGATTAAGAGCGTTTCAACTGAGCGTTGGGCTGGTTGCAGATGGTTTTCCAAGTGAAGCTACCTTTAAGGCTT
TAGGCGTTATTTAA

Upstream 100 bases:

>100_bases
TTCTTTTAGGCCGATATCTTTTTTATGCATTCTTGGAGTATTCATTTTGATTAAACATGTCCCGTTAGCCTCCCTGTTAT
TTTTTTCAAGCTTATCAGCA

Downstream 100 bases:

>100_bases
GCAAGTTTGCATTAACTATTCTCCATAATTAAGGTGTAATCAAAATGATTGCACCTTTGGGTTTTATCCATTACATTATC
CCTTTAGCCGCAGTTAAATA

Product: lytic murein transglycosylase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>377_residues
MPASADDFASCVIKLKETAQAQGLSRDTIDNTLAKVKYISRVIELDKKQPEFSQTFDNYFSKRVTDWRVKEGRKLLKENR
ELLNELSQKYGVPPQYLMAFWGLETNFGSYKGKMPVLDSLATLACDPRRSKYFTGELMKALKLKEEYQFESSQMVGSWAG
AMGHTQFMPSAYAKYAVDGDGDGKADLWNSTTDALTSAANFLNQLGWQRNERWGREVKLPKDFSYGYLGKDKAQPLAEWA
KLGVTKSDKTSLSTPDMNAALYLPAGHTGPAFLGYKNFDVIMRWNRSVYYAIAVGHLADRINGGVSLAVKPPKQDNLSRA
RVKSLQAKLNEKGFDVGKPDGVMGRNSKTGLRAFQLSVGLVADGFPSEATFKALGVI

Sequences:
NA

Specific function: NA

COG id: COG2951

COG function: function code M; Membrane-bound lytic murein transglycosylase B

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA