Definition Shewanella sediminis HAW-EB3, complete genome.
Accession NC_009831
Length 5,517,674

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Identifier: 157375112

GI number:

Start: 2385553

End: 2388741

Strand: Reverse

Name: Not Available

Synonym: Ssed_1975

Alternate gene names: NA

Gene position: NA

Preceding gene: 157375113

Following gene: 157375111

Centisome position: NA

GC content: NA

Gene sequence:

>3189_bases
ATGGCACATAAATCTCAACTAGCAGCACAGCAACCGGGAAACAATCCCTTAGAAGGAGTGATCACTTGGTTTGCTCAAAA
CCCAGTAGCTGCAAACTTACTACTGATTTCAATTTTAGCATTAGGTTTGTTTTCTCTTACATCACTCAGAAAAGAAGCCT
TCCCTAGCATTGAGCCTAACAAGGTGACGGTGTCGGTCAACTATGACAGCGGAGATGCTAAACAAGCTGAAGAAGGTATC
GCGATAAAAATTGAAGATGCGCTAGAAACCGTATCGGGTATTAAGCGTATCACCTCTAAATCCAATGCCTATGGTTCGAC
TGTCACCATTGAAAAAAAGACGGGCTATCCGCTGGATGACTTACTGAACGATGTCAAAACCAATGTTGATGCCATTTATA
ATTTCCCTCTAGCTGCAGAGAACCCTGTTATCGATAAAGCAAGGAAAAAAGATCATGCATTGTGGGTGCAGTTTTATGGT
GATGCCGGTAGGACCACGTTTCAGCAATTAGCAGAAAAGCTAAAAAATGAATTGTTAGCACAATCTGAAATAACAGATTT
AGAGATAAAAGCCAAGGTCAATCCTATGATTTCGGTCGAAGTCGATGAGATCAAGTTACAAGCTTACGGATTAACCTTAT
CTGATGTCACTGACGCTATTAATGCCGAATCTTTAACTCCAGTTAGCACTAGTTTACGTAATAAGAATAAGACAGTACGA
CTAAAAGCATCCGCACAGGCTTATCGACAGCTTGAATTTAGCCAGTTGCCGTTGATTACGACAACAGACGGCACCTTGAT
TACATTAGGTGACGTCGCATTGGTACAAGATACCTTTGAAGATGTTACCTATAGTTTGTCCCGGTATAATCAGCAACCAG
GTATGGCGATTGAAATCGTTATGGGTGAGCAGGGGGATTTGATTAAAGCCGTTGAACAGGCAAGCGATGTCGTAAAAAAA
TGGCAAACAAATGGTGCATTACCGGAAGGAGTATTTCTAGAGACGTGGAGTGATGAGAGTATACTGATTAAAGATCGTTT
AGCATTGCTTGCTGACAATGCATTATCCGGTGTGGCTCTGGTCTTTATCGTCCTTGCACTATTTTTGAATATCCGCGTTG
CCTTCTGGGTCGCTGCCGGAATACCGTTTGTTTTCTTCGGTACACTGTATTTTATGACTGATAGCTTTATGGCGCTGAGC
ATTAATGAGTTAACCACCTTTGGTTTTATTATGGCGCTCGGTATCGTTGTTGATGATGCAGTGGTTGTTGGCGAGAGTAT
TTATACAACCCGGAGAGAGGCAGAGGATTCACTTGGTAGTACCGTCAAAGGTACCATGAAAGTTGCTATTCCGACGTTAT
TTGGCGTACTGACGACGGTTGCAGCATTTGCCTGTTTATCTAATGTAGCAGGTGATTTAGGCCAAATTTTTTCGCAGTTT
GCAGCAGTGGTCACTATCTGCTTACTATTGTCTATGGTGGAGTCAAAGCTGATTCTACCTTGCCATTTAGCTCATGTTAA
TACCCATAAAAGCCCCCCTAAAGGTATTTTGGGATCATGGAGCCGTATTCAACATGGTGCAGATGCGGGTCTTGAATGGT
TTAATAAGAAAGTGTATCGCAACATGATTGAGTGGGCACTTAAACTTCGATATGCCATCATATTTGGTTTTATTACTGTG
TTTATACTCGTTATTGGTATGCCAATGAACGGCACTGTTCGTACTTCGTTCTTCCCAGAAATTGCAGGTGGTACGGTTAC
TTCCAATTTGGTTATGCAAAATGATGCTAGCTTTGGTCAAACTGATGCAAATTTAAGAACCATAGAAGCGGCCGCTATTC
ACGCTGACTTACTGTTACGTGAAAACAAGGGCGTAGAAGAGACTCAAATTGGTAGTTTACAGCTTATTGCTGATGCTGAT
AGCACTGGTAAAATTACTGTCGAGCTTATTGACAGTCCAGCATACAGCGCCGTCGAGTTTAAAAATGAATGGACACGTAT
GAGTGGAGAACTCGAGGGTGTTAAGAAGGTTAATTTTTTAGCCTATAAGCATATGGTTGATAACTTTAAAGTCGAGTTGA
AAGCTGGAGACTATGCAACAGTTAAACAAGCCGGCGACCAACTTTTAGCTCGATTGAAAGCGATGCCTGCTGTCAGTGGT
ATTGATCATAATTTGAGTCCAGGACAACCTCAATTTCGCTTTACGGTGACAGAGCAAGGCCGAGCTTTAGGTATGAACAG
TGCGAGTTTGTCCAAGCAAGTGTTAGAGTCTTTCGGCGGCGACATTGTTCAACGCTATCAACGTAATACCGATGAGGTAA
AGGTAAGGGTTCGCTATCCGGAGCGAAAGCGCCAAACCTTAGCAGATATTATGCAAGCGCGTGTACGCACACCAGCGGGT
ACCTTGGTGCCTTTGAGCGTGGTGGCAAATATTACGAGTGAGTATCAACAAGATGAAATCACACGTATTAATAGCTTAAG
AGCGGTATATATCACTGCCGCATTAGATAAAAACCAAATCTCGCCAAGTGAGTTGGTTGCGCAGCTCGAAGCGACTCTAG
TACCAGAGCTTGAGAAGCAATTTAGTGACCTAAATATCTATTTTGCCGGGGAGGCTGAGCAAAAGGCTGATACCATGGCG
TCTATGGCCGAGATGTTTATGTTGGCCTTGCTCATTATATACGTGCTACTAGCGGTACCATTGAAATCCTATACTCAACC
CATACTTATTATGCTTGCGATTCCTTTTGGTATTGTTGGTGCAATATTAGGCCACTGGTGGAATGATCTTACGATTAGTA
TTTTGTCTCTATTCGGTATATTGGCATTAAGTGGTGTAGTGGTAAATGACAGTTTGCTATTGGTTTCTAGGTTTAATGAA
TTAATAAAACAAAAATCGTTATCGCTGCATGATGCAATTGTAGAAGCTTGCACTAGTCGCCTACGAGCCGTGTTCTTAAC
CTCACTGACAACATTCGTGGGATTATCACCTATTTTGGCTGAAACCTCTTTGCAGGCACAGTTTCTTATCCCCGCAGCGG
CTTCGCTGGGTTACGGGATCGTATTTGCTACTGTAATTACTTTGGTATTGATTCCTGCATTACTCTTTATTCAAGTTGAA
GTTGGTGTATTGTTAAGTACATTAAAGGTTAACTTATTTAAAACGAGAAAATTGGTGACTAAATGCTAA

Upstream 100 bases:

>100_bases
TGACACCCAAAACTGAGATACTTATTGGTAGTAGTCTTTATTCTCAAGATATAGAAGCACTTGAAGAGATTGCTCAAAGT
CATAGTGAGGTGAGCAGATA

Downstream 100 bases:

>100_bases
ATTTATTACTTGTTGAAGACGACATAGATCTAGCGACTGCTGTAATCGAATACCTTGAGATGGAATCAATACAATGTGAT
AGTGCCTACAATGGTTTAAC

Product: acriflavin resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1062_residues
MAHKSQLAAQQPGNNPLEGVITWFAQNPVAANLLLISILALGLFSLTSLRKEAFPSIEPNKVTVSVNYDSGDAKQAEEGI
AIKIEDALETVSGIKRITSKSNAYGSTVTIEKKTGYPLDDLLNDVKTNVDAIYNFPLAAENPVIDKARKKDHALWVQFYG
DAGRTTFQQLAEKLKNELLAQSEITDLEIKAKVNPMISVEVDEIKLQAYGLTLSDVTDAINAESLTPVSTSLRNKNKTVR
LKASAQAYRQLEFSQLPLITTTDGTLITLGDVALVQDTFEDVTYSLSRYNQQPGMAIEIVMGEQGDLIKAVEQASDVVKK
WQTNGALPEGVFLETWSDESILIKDRLALLADNALSGVALVFIVLALFLNIRVAFWVAAGIPFVFFGTLYFMTDSFMALS
INELTTFGFIMALGIVVDDAVVVGESIYTTRREAEDSLGSTVKGTMKVAIPTLFGVLTTVAAFACLSNVAGDLGQIFSQF
AAVVTICLLLSMVESKLILPCHLAHVNTHKSPPKGILGSWSRIQHGADAGLEWFNKKVYRNMIEWALKLRYAIIFGFITV
FILVIGMPMNGTVRTSFFPEIAGGTVTSNLVMQNDASFGQTDANLRTIEAAAIHADLLLRENKGVEETQIGSLQLIADAD
STGKITVELIDSPAYSAVEFKNEWTRMSGELEGVKKVNFLAYKHMVDNFKVELKAGDYATVKQAGDQLLARLKAMPAVSG
IDHNLSPGQPQFRFTVTEQGRALGMNSASLSKQVLESFGGDIVQRYQRNTDEVKVRVRYPERKRQTLADIMQARVRTPAG
TLVPLSVVANITSEYQQDEITRINSLRAVYITAALDKNQISPSELVAQLEATLVPELEKQFSDLNIYFAGEAEQKADTMA
SMAEMFMLALLIIYVLLAVPLKSYTQPILIMLAIPFGIVGAILGHWWNDLTISILSLFGILALSGVVVNDSLLLVSRFNE
LIKQKSLSLHDAIVEACTSRLRAVFLTSLTTFVGLSPILAETSLQAQFLIPAAASLGYGIVFATVITLVLIPALLFIQVE
VGVLLSTLKVNLFKTRKLVTKC

Sequences:
NA

Specific function: NA

COG id: COG0841

COG function: function code V; Cation/multidrug efflux pump

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA