Definition Shewanella sediminis HAW-EB3, complete genome.
Accession NC_009831
Length 5,517,674

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Identifier: 157374811

GI number:

Start: 2003566

End: 2005641

Strand: Reverse

Name: Not Available

Synonym: Ssed_1672

Alternate gene names: NA

Gene position: NA

Preceding gene: 157374812

Following gene: 157374810

Centisome position: NA

GC content: NA

Gene sequence:

>2076_bases
ATGAACAACAAGATAAAACATGCCAAACATGCTTTAGCGGTAGCAATCGGTCTGCTGAGCTTTTCGGCTTCAGCAAGCGA
AGCGATCACGGCGGAAGAGTTGGCAACACTTCAACAGGTGACTCAGGTACAGGTCAGCCCTGACGGCGACAGCGTAGCAT
TTACCCGTTCGGTACCGAGAAAACTTTATCAGGACAAAGATGGCTTGAATTGGGGCGAGCTATACATTGTCGACGATAAA
GGCGTTGAACGTCCTTACATCACGGGCGAAGTGAATATCAAGCAGATCCAGTGGTCAAAAGACGGCACTTTGATCTATTT
TCTTGCCAAGATGGGCGATGATGAATTCGTCACCCTATACCAGATCCCATTCGATGGTGGTCAGGCCCTGAAAACCATGG
CTCTCGATGGTACCGATATCGGACACTTCTCATTAAGTGAAGATAATAAGCAGATCGCGTTATTGGCCATGCCAGCCAAA
GAGAAATCAGAGAAGAAACTTAAGGAGCTGGGTTTTAAGGCTGAGATCTACGAAGAGAACTTAAAGAACAAGCAGCTATT
TGTTGTCGACCTCGCCGTTACCGACAAACCACTAAAGCCAATAGCGTGGGAGATAGAGGATTATGTCTCGGATATGCATT
GGTCTCCTGAGGGAGAGACGCTGTTAATCAAGACTCAGCCAACTGCTCTGATCGATGATAAATACATGAAATCGAAGTGG
CAGATAGTCAATATCGCCACTCAACAAACCGTGACGACCTTTATTACCGAAGGGAAATTAGGTGCAGCCGAGTTTTCCCA
TGACGGTAAATATATCGCCATCCATGGCGCCGAAGATAAGCATGACCCGGCAACCGGACGTCTGTTCCTGGGGAATGTTA
AAAGCGGTGAAGTGACCGATTGGTTGCCTGACTTCAAGGGCCATGTAGCAGATTTTGAGTGGGCTAACGATGAGAACACT
CTGTATTTAATCGCAAATGTGGATACTCAGTCGGTAGTCGCCACCATCAAGCCCGGTAAGACTAAATACAAGGAGGTGGT
TAAGGGCGGCAAGTTTATCGCCGGCAAGCTGAGCATCTCAGATTCGGATGCAACGGTAACTTTAAAAGGCAATACAGCCG
AGCATCCCAACGAAGTGTTTATGCTCCGTGGCAGCAAACATAAGCAGACTCGTCTTACTCACTCAAACAGCTGGTTAGGC
GATAAACGCTTCGCTAAGCAAGAGAGCATTGAGTTCAAGGCCCGTGATGGCGTGGAGATTGGTGGAGTGTTGATCTACCC
ATTAGATCATAAGGAAGGTCAACGTTACCCGCTCATCATGTCGGTACACGGCGGCCCCGAGAGTCATGACAAAGATGGTT
GGGTCACCAACTACTCACGTCCGGGTCAGATGGCTGCAGCGCAAGGCTATGCCGTCTTCTATCCCAATTATCGCGGCAGT
ACGGGTAAAGGAGTCGACTACTCTAAACTTGGACAAAACGATTATGCGGGTAAAGAGTTTGATGATCTGGTGGACTTTAA
AGATCACTTAGTCGACATGGGGTTAGTAGACAGTAAGAAAGTCGGTATTACAGGCGGCTCTTACGGCGGTTATGCTTCGG
CATGGGCGGCAACAAAACTGACCAAACATTTCGCCGCAAGCGTAATGTTTGTCGGTGTGACCAACCAGTTGTCTAAGTTT
GGTACCACAGATATCTCTAACGAGATGCACTTAGTACATGCCCGCTCATACCCTTGGGACAAGTGGCAATGGTATCTGGA
GCGCAGCCCTATCTACTGGGCGGGTCAATCAGAGACACCACTACTGATCATGCATGGTAAAGATGATCCTCGCGTTCATC
CGGCTCAATCTATGGAGCTTTACCGCTACATGAAAGTTCAGGGGAAAGATGTACGCCTGGTCTATTACCCGGGTGAAGGT
CACGGTAACAAAAAAGTCGCTGCCCAGTATGATTACAACCTGCGTCTGATGCGCTGGATGGATCACTATCTGAAAAATGA
TGGTAAAGAGATGCCCGACTACAAGCTTGATCATGAGGCTAAATTAGAGCAGATAACCAAGGCTGACGCAGAGTAA

Upstream 100 bases:

>100_bases
GTATGAGATTTGTTTTCGTTTTGTATTGATTAAAACTATAATGCCCGACCAGATCAAGATGACCACATTAATAATAAAGA
TAACCGGAGTCATTATTTAC

Downstream 100 bases:

>100_bases
CTCCCCAAGAGAGTCAAGCTGTTTATATAGGCCTGATAGCTTTGTCGCTATCAGGCCTTTTATTTTATACAAATTGAATA
GAGTTCAATTTATAGATCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>691_residues
MNNKIKHAKHALAVAIGLLSFSASASEAITAEELATLQQVTQVQVSPDGDSVAFTRSVPRKLYQDKDGLNWGELYIVDDK
GVERPYITGEVNIKQIQWSKDGTLIYFLAKMGDDEFVTLYQIPFDGGQALKTMALDGTDIGHFSLSEDNKQIALLAMPAK
EKSEKKLKELGFKAEIYEENLKNKQLFVVDLAVTDKPLKPIAWEIEDYVSDMHWSPEGETLLIKTQPTALIDDKYMKSKW
QIVNIATQQTVTTFITEGKLGAAEFSHDGKYIAIHGAEDKHDPATGRLFLGNVKSGEVTDWLPDFKGHVADFEWANDENT
LYLIANVDTQSVVATIKPGKTKYKEVVKGGKFIAGKLSISDSDATVTLKGNTAEHPNEVFMLRGSKHKQTRLTHSNSWLG
DKRFAKQESIEFKARDGVEIGGVLIYPLDHKEGQRYPLIMSVHGGPESHDKDGWVTNYSRPGQMAAAQGYAVFYPNYRGS
TGKGVDYSKLGQNDYAGKEFDDLVDFKDHLVDMGLVDSKKVGITGGSYGGYASAWAATKLTKHFAASVMFVGVTNQLSKF
GTTDISNEMHLVHARSYPWDKWQWYLERSPIYWAGQSETPLLIMHGKDDPRVHPAQSMELYRYMKVQGKDVRLVYYPGEG
HGNKKVAAQYDYNLRLMRWMDHYLKNDGKEMPDYKLDHEAKLEQITKADAE

Sequences:
NA

Specific function: NA

COG id: COG1506

COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA