Definition Shewanella sediminis HAW-EB3, complete genome.
Accession NC_009831
Length 5,517,674

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Identifier: 157374787

GI number:

Start: 1968966

End: 1973090

Strand: Reverse

Name: Not Available

Synonym: Ssed_1648

Alternate gene names: NA

Gene position: NA

Preceding gene: 157374798

Following gene: 157374786

Centisome position: NA

GC content: NA

Gene sequence:

>4125_bases
ATGCTCAAATTCGCAGACATTCGTCTTCGTCCCAAAATGCTTGGATTGTTACTTATATTTGGTATTTTACCTATGATTGC
AGTCGCAATTCATAGCAGTCGATTGAGCTCAGAAGCACTGATTGAAAAATCATATCAAGGGCTCAGTTCAATACAGTCAT
TGAGAATCTCTGCTATCGATGATTTTTTCCGCGAACGCTTATCTGGGTTAGATACATTAGCTCATACGGGACAACTTAGT
GAATTTATAGAACAGGTGGGTAGTGAACACGAAATATTACCCTCTATCATAGCTTCCCGTTACGATCCCTTTTTTACCTC
CTTTGTAGACGATTATGGCTACGATGATCTGGTTATTCTTAAGCCTGAATCAGGAGAATTACTTTATTCATTAACTAATA
GAAACCGGGTTGGAATCAAGCTCAGTGAATATACCGGTGATCCGGCTCTCAAGCAGGCTTGGTCAAAAACAATGAATACC
CGCAAGCCCATTTTTTCAGACTTTGGCGTATTTAACGTAAACGACGAATCGAAGCGTCAGCAAAATGCTTACTTATCCAG
CCCTATTTGGAACAGTAATGGTGAAATGACTGCCGTAATAGCAGTGAGAATTCTACCCGATTTAATCAATGATATTGTCA
ATTCACGGATTGGAATGGGGGCAACGGGTGAGTCATACATTATTGGATTAGATAACCAAGATAGCCAAATAGAGTTACGT
AGCGATATTACTACGATGGGCAATGGCAGCTATCGCGTAGGGTATCGCTTTGAAAAGGATTTAGATTATTGGAACGATGC
GATAGATGCTGGCACCAGTGGGGGAAAAGATACCTATGTTGATAGTTCAGGCCATCCTGTTTTAGTCGTTTTTAATCAAC
TCAATGTACCAGGGTATCAATGGTTTCTAATTTCAAAAATCAATGAAGATGAAGTTACCCACCCTATTACATCGCTTTAT
CAAGCAGTGATAGTGGCAACTGCTGCATTGATTTTATTAGTGATATTTGTAGCCGTGAAATTTTCTCGTTCAGTCACAGA
GCCACTTATTGAATCGATGAAGTTTGCCAAAGATATCTCTGCTGGCACCTTAAGTTCAAAATTGACCTTACAACGTAAAG
ATGAACTTGGTGATCTTGGTATTGCCTTAAATGGTATGGCCGTACAACTGCGTGAGCTTGATTGGATTAAGTCAGGTAAA
GAAGGGTTAGATGATAAATTACGTGGTGACATTGAGCTATCAGAACTCTCCAGCTTGTTTATTAATTTCTTTACTAAACA
TATGGGTTGTCAGCTAGGGGCCTTATACCTATTTGAAGAGGAAAAATTACACCTCAGAGCCAGTTATTGCTTTACGGACA
GACAAGGCAATTTCAACCAACTTGCACTTGGGGAGGGCATGGTAGGGCAAGCAGCATTGGAACAGGAGACCATTATATTC
TCTGACATGACTCATGCTGCCCCCACATTAAACTATGGTGTTGGAGAAACAAGCTTAAAGAGCTTTATGTCGGTCCCCTT
AATTGTGGATGGTCATCTCGTTGGCGTAGTGCTACTTGGCTCAACGGCACCTTTTACCTCACTGCAAAAGCAATTTGTAA
AGGATGTGATTAATAGTGCCGCCATACTTTTTGATGCTGCAAATGCTCGCTTAGTCATTCGTACATTATTAGAACAAGCG
CAAAAACAACAAGAGAACCTAAGTAAAGCCAATGATGGCTTGAAAGAATCTGAACAAGCATTGCAAAACCAACAAGAAGA
GTTACGAGTCACCAATGAGGAGCTGGAAGAGCAAACCAAAGTGCTTAAAGAGTCAGAAGCTGAGCTACAAGCTCAACAGG
AAGAACTTCGCGTTACTAACGAAGAGCTGGAAGAGCGAACTAAAGCACTGGAAGAGCAGCAAGTTGAGATGCAGGGGAAA
AATGATCAACTGCATTTAGCTCAAAATGTCGTGGAAGAAAAAGCGAAAGAGTTAGCAAGCGCAAGTAAGTACAAATCTGA
ATTTTTAGCGAATATGTCCCATGAACTGAGGACCCCACTCAACAGTATTCTCATTTTATCCCAGCTACTTGCCAGTAACA
AAGCGGGCAACTTAAATGATAAACAGATTGAATCAGCCAAAGCCATTAACTCATCTGGATCTGATCTGCTATCGCTAATC
AATGAAGTTTTGGATCTGTCCAAGGTTGAAGCGGGTAAGGTCGAACTGCAAATTGAAGATGTGAGCTTTCAAGAGATAGA
GCAAGATATTAATCGCTTATACCAGGATATCGCTGTTGATAAAGGACTGTATTTCGATATTGCTCTTGCAGCCGATCTGC
CGAATGAGATCAAAACTGACTCGTTGCGATTACAACAAATCTTGCGCAATCTACTAACCAATGCGTTTAAATTTACCCAT
GAAGGCGCAGTAACTCTTAGCATTACTCAGCCAACAAATGAAGTTGCAGCACGCATGCAACAGCCTAAACAATCATTAGT
CGCCTTTACGGTAAAAGATGACGGAATAGGAATTAAAAAAGAGAAGCAATTAGGCATCTTCCAAGCGTTCCAACAGGCTG
ACGGTAGTACAAGTCGAAAATATGGCGGCACAGGTCTAGGATTATCGATATCTAAAGAGCTTACTCATCTATTAGGTGGG
ACTATTTTACTGAAAAGTGACGAAGGCAAAGGTTGTGCGTTTACCGTTGTGCTGCCTCTTGAGTTTCAACCCAAAGATGA
AGAAGCTGATAAGAGCATTTTTGGTATTCCTATCATGGAAAAAAGGGCACTAGAACCAGAAGAGCTGCAACCACTAAATA
GCCAAGTTAAAAGTGATGCCGATATTAACACTAATAAACAGGCAGAAAACACAGATCTACAGCTGATATCCCAAGCGGCT
GCAATCCCTAGTGTAAAGCTAAACGTAAAAGACGAAAGTTATATCGATGACGACAGGTTATCGATTGCCGCCGAAGATCA
AACTTTGCTGATTATTGAAGATGACCGCGCCTTTGCCGGTGTGATGCGTGATTTTGGCCGCGAAAGAGGCTTTAAGTGTA
TTGTCGCTGAAACAGGCGAAACAGGATTACATTTCGCCGATTATTATAAACCGAGTGCCATTATTTTAGATATTGGGCTA
CCCGGTATTGATGGTTGGACAGTGATGGAGCGACTCAAAGAAAACTCAGAGTTACGCCATATACCAGTGCACTTCATGTC
GGCGAGCGATAATAATCTCGATGCAATGAGAATGGGAGCAATTGGCTATCTAACTAAGCCGGTAGACCTGAACAAACTGA
ATAAAACGTTTGGCGATATTGAGGAGATAATTGCTAAGTCAGTTAAGAAATTACTGATTGTCGAAGATGACGAAATTCAA
AGGGAGAGTATTCGCCAGTTACTGGGTGAAGGTGATATTCACATTGTCGGCGTGGCAACAGGAAAACAAGCGCTACAAGA
GCTAGAGACAAATCGATACGACTGTATGATCTTAGACTTAGGCCTTGAAGATCTATCCGGATTTGAGTTGCTCGATAAAA
TTCGACGCAGTGATTCAGCAGCCAGAGTACCGATTATCGTCTATACGGGCCGAGAGTTAACCGTAGACGAAGAGAAAGAG
CTCAGCCGTTATGCGGAAAGCATCATAATTAAAGGGGTTAAATCGCCAGAGCGCCTGTTAGACGAGTCAGCCCTCTTTTT
ACATCGAGTAGAGTCTCGCCTGCCGGCAGAGCAACGGGGTATGTTGAAAGCCGTGCATGATAAAGAAACCGTGTTGGCTG
GTAAGAAAATCTTGTTAGTCGATGATGATATGCGCAATGTTTTTGCGTTATCAAGCATTTTAGAAGACAAAGGTATTGAA
ATCGTTGTTGGTCGTGATGGTCTGGAAAGTATCGAAAAATTGGACCAACATCCGGATATAGCCCTCATCTTAATGGACAT
AATGATGCCAAAAATGGATGGTTATGATGCAATGAAAGAGATCCGTAAAAAACGTAAATACAAGAAACTACCTATTATCG
CCCTGACAGCTAAAGCGATGAAAGGTGACCGAAGTAAGTGTATTGAGGCTGGAGCCAGTGATTATTTAGCTAAACCGGTC
GACACCGATAAATTACTATCTATGTTACGAGTGTGGTTGTACTGA

Upstream 100 bases:

>100_bases
ACAGATTAAGGTCAAAGTTATCTTGTTAAAGAGTTGAGTAAGTCAGCGACTTAGTAGAAAGTCATATTAATAAAAACTTA
TGGTCTAATCAGGTGTGTTA

Downstream 100 bases:

>100_bases
TATGTTTGAAGAGAACAAAACAGCGAACGAATATCTAGAAATCCAACTCTTGCTAGAAGCGATTTACCGTAAATATGGTT
ATGATTTTAGAGAATATTCT

Product: histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1374_residues
MLKFADIRLRPKMLGLLLIFGILPMIAVAIHSSRLSSEALIEKSYQGLSSIQSLRISAIDDFFRERLSGLDTLAHTGQLS
EFIEQVGSEHEILPSIIASRYDPFFTSFVDDYGYDDLVILKPESGELLYSLTNRNRVGIKLSEYTGDPALKQAWSKTMNT
RKPIFSDFGVFNVNDESKRQQNAYLSSPIWNSNGEMTAVIAVRILPDLINDIVNSRIGMGATGESYIIGLDNQDSQIELR
SDITTMGNGSYRVGYRFEKDLDYWNDAIDAGTSGGKDTYVDSSGHPVLVVFNQLNVPGYQWFLISKINEDEVTHPITSLY
QAVIVATAALILLVIFVAVKFSRSVTEPLIESMKFAKDISAGTLSSKLTLQRKDELGDLGIALNGMAVQLRELDWIKSGK
EGLDDKLRGDIELSELSSLFINFFTKHMGCQLGALYLFEEEKLHLRASYCFTDRQGNFNQLALGEGMVGQAALEQETIIF
SDMTHAAPTLNYGVGETSLKSFMSVPLIVDGHLVGVVLLGSTAPFTSLQKQFVKDVINSAAILFDAANARLVIRTLLEQA
QKQQENLSKANDGLKESEQALQNQQEELRVTNEELEEQTKVLKESEAELQAQQEELRVTNEELEERTKALEEQQVEMQGK
NDQLHLAQNVVEEKAKELASASKYKSEFLANMSHELRTPLNSILILSQLLASNKAGNLNDKQIESAKAINSSGSDLLSLI
NEVLDLSKVEAGKVELQIEDVSFQEIEQDINRLYQDIAVDKGLYFDIALAADLPNEIKTDSLRLQQILRNLLTNAFKFTH
EGAVTLSITQPTNEVAARMQQPKQSLVAFTVKDDGIGIKKEKQLGIFQAFQQADGSTSRKYGGTGLGLSISKELTHLLGG
TILLKSDEGKGCAFTVVLPLEFQPKDEEADKSIFGIPIMEKRALEPEELQPLNSQVKSDADINTNKQAENTDLQLISQAA
AIPSVKLNVKDESYIDDDRLSIAAEDQTLLIIEDDRAFAGVMRDFGRERGFKCIVAETGETGLHFADYYKPSAIILDIGL
PGIDGWTVMERLKENSELRHIPVHFMSASDNNLDAMRMGAIGYLTKPVDLNKLNKTFGDIEEIIAKSVKKLLIVEDDEIQ
RESIRQLLGEGDIHIVGVATGKQALQELETNRYDCMILDLGLEDLSGFELLDKIRRSDSAARVPIIVYTGRELTVDEEKE
LSRYAESIIIKGVKSPERLLDESALFLHRVESRLPAEQRGMLKAVHDKETVLAGKKILLVDDDMRNVFALSSILEDKGIE
IVVGRDGLESIEKLDQHPDIALILMDIMMPKMDGYDAMKEIRKKRKYKKLPIIALTAKAMKGDRSKCIEAGASDYLAKPV
DTDKLLSMLRVWLY

Sequences:
NA

Specific function: NA

COG id: NA

COG function: NA

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA